Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.13□□□□□ -2.39
Col27a1Q5QNQ9 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.13□□□□□ -2.39
Col27a1Q5QNQ9 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.13□□□□□ -2.39
Col27a1Q5QNQ9 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.13□□□□□ -2.39
Col27a1Q5QNQ9 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.13□□□□□ -2.39
Col27a1Q5QNQ9 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.13□□□□□ -2.39
Col27a1Q5QNQ9 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.13□□□□□ -2.39
Col27a1Q5QNQ9 Gm37715-201ENSMUST00000193206 235 ntBASIC0.13□□□□□ -2.39
Col27a1Q5QNQ9 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.13□□□□□ -2.39
Col27a1Q5QNQ9 Gm43563-201ENSMUST00000196761 198 ntBASIC0.13□□□□□ -2.39
Col27a1Q5QNQ9 Gm44959-201ENSMUST00000209127 231 ntBASIC0.13□□□□□ -2.39
Col27a1Q5QNQ9 AC166341.3-201ENSMUST00000221861 114 ntBASIC0.13□□□□□ -2.39
Col27a1Q5QNQ9 Gm24316-201ENSMUST00000083041 107 ntBASIC0.13□□□□□ -2.39
Col27a1Q5QNQ9 Gm24423-201ENSMUST00000101982 106 ntBASIC0.12□□□□□ -2.39
Col27a1Q5QNQ9 Gm26415-201ENSMUST00000157673 292 ntBASIC0.12□□□□□ -2.39
Col27a1Q5QNQ9 Gm22434-201ENSMUST00000158549 122 ntBASIC0.12□□□□□ -2.39
Col27a1Q5QNQ9 Gm24547-201ENSMUST00000158649 149 ntBASIC0.12□□□□□ -2.39
Col27a1Q5QNQ9 Gm17919-201ENSMUST00000173344 312 ntBASIC0.12□□□□□ -2.39
Col27a1Q5QNQ9 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC0.12□□□□□ -2.39
Col27a1Q5QNQ9 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.12□□□□□ -2.39
Col27a1Q5QNQ9 Gm45541-201ENSMUST00000210443 54 ntBASIC0.12□□□□□ -2.39
Col27a1Q5QNQ9 Gm3702-201ENSMUST00000211754 346 ntBASIC0.12□□□□□ -2.39
Col27a1Q5QNQ9 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
Col27a1Q5QNQ9 Gm22368-201ENSMUST00000102416 109 ntBASIC0.11□□□□□ -2.39
Col27a1Q5QNQ9 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC0.11□□□□□ -2.39
Col27a1Q5QNQ9 Gm24006-201ENSMUST00000158462 132 ntBASIC0.11□□□□□ -2.39
Col27a1Q5QNQ9 Gm23416-201ENSMUST00000175520 95 ntBASIC0.11□□□□□ -2.39
Col27a1Q5QNQ9 Mir721-201ENSMUST00000200230 88 ntBASIC0.11□□□□□ -2.39
Col27a1Q5QNQ9 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC0.11□□□□□ -2.39
Col27a1Q5QNQ9 AC116460.1-201ENSMUST00000219040 313 ntBASIC0.11□□□□□ -2.39
Col27a1Q5QNQ9 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.11□□□□□ -2.39
Col27a1Q5QNQ9 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
Col27a1Q5QNQ9 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC0.1□□□□□ -2.39
Col27a1Q5QNQ9 Gm22942-201ENSMUST00000158563 124 ntBASIC0.1□□□□□ -2.39
Col27a1Q5QNQ9 Gm22466-201ENSMUST00000175278 69 ntBASIC0.1□□□□□ -2.39
Col27a1Q5QNQ9 Gm44455-201ENSMUST00000200061 82 ntBASIC0.1□□□□□ -2.39
Col27a1Q5QNQ9 Gm19572-201ENSMUST00000214326 338 ntBASIC0.1□□□□□ -2.39
Col27a1Q5QNQ9 Gm25142-201ENSMUST00000082698 107 ntBASIC0.1□□□□□ -2.39
Col27a1Q5QNQ9 Gm23941-201ENSMUST00000101953 107 ntBASIC0.1□□□□□ -2.39
Col27a1Q5QNQ9 Gm25494-201ENSMUST00000158143 100 ntBASIC0.1□□□□□ -2.39
Col27a1Q5QNQ9 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Col27a1Q5QNQ9 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
Col27a1Q5QNQ9 Gm44858-201ENSMUST00000207360 154 ntBASIC0.1□□□□□ -2.39
Col27a1Q5QNQ9 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.09□□□□□ -2.39
Col27a1Q5QNQ9 Gm23761-201ENSMUST00000158347 104 ntBASIC0.09□□□□□ -2.39
Col27a1Q5QNQ9 Gm26402-201ENSMUST00000158499 113 ntBASIC0.09□□□□□ -2.39
Col27a1Q5QNQ9 Gm26159-201ENSMUST00000158968 104 ntBASIC0.09□□□□□ -2.39
Col27a1Q5QNQ9 Gm25596-201ENSMUST00000178368 107 ntBASIC0.09□□□□□ -2.39
Col27a1Q5QNQ9 Gm26073-201ENSMUST00000179906 127 ntBASIC0.09□□□□□ -2.39
Col27a1Q5QNQ9 Gm27402-201ENSMUST00000183890 120 ntBASIC0.09□□□□□ -2.39
Col27a1Q5QNQ9 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.09□□□□□ -2.39
Col27a1Q5QNQ9 Gm44457-201ENSMUST00000198109 76 ntBASIC0.09□□□□□ -2.39
Col27a1Q5QNQ9 Gm43976-201ENSMUST00000203637 235 ntBASIC0.09□□□□□ -2.39
Col27a1Q5QNQ9 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC0.09□□□□□ -2.39
Col27a1Q5QNQ9 Gm22738-201ENSMUST00000083440 147 ntBASIC0.09□□□□□ -2.39
Col27a1Q5QNQ9 Gm25894-201ENSMUST00000083458 75 ntBASIC0.09□□□□□ -2.39
Col27a1Q5QNQ9 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.09□□□□□ -2.39
Col27a1Q5QNQ9 Mir709-201ENSMUST00000102190 88 ntBASIC0.08□□□□□ -2.4
Col27a1Q5QNQ9 Gm11904-201ENSMUST00000120562 248 ntBASIC0.08□□□□□ -2.4
Col27a1Q5QNQ9 Gm27735-201ENSMUST00000185085 76 ntBASIC0.08□□□□□ -2.4
Col27a1Q5QNQ9 Gm44563-201ENSMUST00000207958 178 ntBASIC0.08□□□□□ -2.4
Col27a1Q5QNQ9 Gm25814-201ENSMUST00000082754 107 ntBASIC0.08□□□□□ -2.4
Col27a1Q5QNQ9 Mir411-201ENSMUST00000083543 82 ntBASIC0.08□□□□□ -2.4
Col27a1Q5QNQ9 Gm22999-201ENSMUST00000157082 88 ntBASIC0.08□□□□□ -2.4
Col27a1Q5QNQ9 Gm20409-201ENSMUST00000173457 130 ntBASIC0.08□□□□□ -2.4
Col27a1Q5QNQ9 Gm22242-201ENSMUST00000175224 118 ntBASIC0.08□□□□□ -2.4
Col27a1Q5QNQ9 Gm7240-201ENSMUST00000220769 664 ntBASIC0.08□□□□□ -2.4
Col27a1Q5QNQ9 Gm25634-201ENSMUST00000082667 105 ntBASIC0.08□□□□□ -2.4
Col27a1Q5QNQ9 Gm24765-201ENSMUST00000083691 103 ntBASIC0.08□□□□□ -2.4
Col27a1Q5QNQ9 Gm22784-201ENSMUST00000104088 132 ntBASIC0.07□□□□□ -2.4
Col27a1Q5QNQ9 Gm23989-201ENSMUST00000117030 66 ntBASIC0.07□□□□□ -2.4
Col27a1Q5QNQ9 Gm15654-201ENSMUST00000152660 300 ntBASIC0.07□□□□□ -2.4
Col27a1Q5QNQ9 Gm25772-201ENSMUST00000158574 56 ntBASIC0.07□□□□□ -2.4
Col27a1Q5QNQ9 Gm25300-201ENSMUST00000175284 84 ntBASIC0.07□□□□□ -2.4
Col27a1Q5QNQ9 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Col27a1Q5QNQ9 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Col27a1Q5QNQ9 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Col27a1Q5QNQ9 Gm25882-201ENSMUST00000157784 85 ntBASIC0.06□□□□□ -2.4
Col27a1Q5QNQ9 Gm22767-201ENSMUST00000158365 165 ntBASIC0.06□□□□□ -2.4
Col27a1Q5QNQ9 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.06□□□□□ -2.4
Col27a1Q5QNQ9 Gm24867-201ENSMUST00000104161 107 ntBASIC0.06□□□□□ -2.4
Col27a1Q5QNQ9 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.06□□□□□ -2.4
Col27a1Q5QNQ9 Gm37330-201ENSMUST00000192606 153 ntBASIC0.06□□□□□ -2.4
Col27a1Q5QNQ9 Snord82-201ENSMUST00000082889 70 ntBASIC0.06□□□□□ -2.4
Col27a1Q5QNQ9 Snord100-201ENSMUST00000116836 74 ntBASIC0.05□□□□□ -2.4
Col27a1Q5QNQ9 Gm25952-201ENSMUST00000175329 74 ntBASIC0.05□□□□□ -2.4
Col27a1Q5QNQ9 Gm24575-201ENSMUST00000175502 77 ntBASIC0.05□□□□□ -2.4
Col27a1Q5QNQ9 Gm24761-201ENSMUST00000179589 127 ntBASIC0.05□□□□□ -2.4
Col27a1Q5QNQ9 Gm45374-201ENSMUST00000211388 136 ntBASIC0.05□□□□□ -2.4
Col27a1Q5QNQ9 Gm19790-201ENSMUST00000214414 251 ntBASIC0.05□□□□□ -2.4
Col27a1Q5QNQ9 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.04□□□□□ -2.4
Col27a1Q5QNQ9 Gm24833-201ENSMUST00000116775 120 ntBASIC0.04□□□□□ -2.4
Col27a1Q5QNQ9 Gm22479-201ENSMUST00000122566 81 ntBASIC0.04□□□□□ -2.4
Col27a1Q5QNQ9 Gm23214-201ENSMUST00000122716 157 ntBASIC0.04□□□□□ -2.4
Col27a1Q5QNQ9 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.04□□□□□ -2.4
Col27a1Q5QNQ9 Gm25771-201ENSMUST00000158565 144 ntBASIC0.04□□□□□ -2.4
Col27a1Q5QNQ9 Gm24321-201ENSMUST00000175348 80 ntBASIC0.04□□□□□ -2.4
Col27a1Q5QNQ9 Gm27993-201ENSMUST00000184362 85 ntBASIC0.04□□□□□ -2.4
Col27a1Q5QNQ9 Mir7657-201ENSMUST00000196051 57 ntBASIC0.04□□□□□ -2.4
Col27a1Q5QNQ9 Gm44687-201ENSMUST00000204975 235 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 285.8 ms