Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.59□□□□□ -1.99
Rnf20Q5DTM8 Gm44807-201ENSMUST00000206115 154 ntBASIC2.59□□□□□ -1.99
Rnf20Q5DTM8 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.58□□□□□ -2
Rnf20Q5DTM8 Gm23996-201ENSMUST00000158062 131 ntBASIC2.58□□□□□ -2
Rnf20Q5DTM8 Gm25796-201ENSMUST00000082645 163 ntBASIC2.58□□□□□ -2
Rnf20Q5DTM8 Gm24412-201ENSMUST00000083426 109 ntBASIC2.58□□□□□ -2
Rnf20Q5DTM8 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Rnf20Q5DTM8 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Rnf20Q5DTM8 Gm26015-201ENSMUST00000104402 125 ntBASIC2.57□□□□□ -2
Rnf20Q5DTM8 Gm22674-201ENSMUST00000104413 131 ntBASIC2.57□□□□□ -2
Rnf20Q5DTM8 Gm24366-201ENSMUST00000175383 86 ntBASIC2.57□□□□□ -2
Rnf20Q5DTM8 Gm25994-201ENSMUST00000175392 101 ntBASIC2.57□□□□□ -2
Rnf20Q5DTM8 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.56□□□□□ -2
Rnf20Q5DTM8 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Rnf20Q5DTM8 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Rnf20Q5DTM8 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.56□□□□□ -2
Rnf20Q5DTM8 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.56□□□□□ -2
Rnf20Q5DTM8 Mir1195-201ENSMUST00000116818 98 ntBASIC2.56□□□□□ -2
Rnf20Q5DTM8 Gm14588-201ENSMUST00000119895 172 ntBASIC2.56□□□□□ -2
Rnf20Q5DTM8 Mir1949-201ENSMUST00000157434 141 ntBASIC2.56□□□□□ -2
Rnf20Q5DTM8 Gm22729-201ENSMUST00000158088 129 ntBASIC2.56□□□□□ -2
Rnf20Q5DTM8 Gm43206-201ENSMUST00000197990 114 ntBASIC2.56□□□□□ -2
Rnf20Q5DTM8 Gm24524-201ENSMUST00000082925 170 ntBASIC2.56□□□□□ -2
Rnf20Q5DTM8 Gm22884-201ENSMUST00000083127 140 ntBASIC2.56□□□□□ -2
Rnf20Q5DTM8 Mir221-201ENSMUST00000083488 95 ntBASIC2.56□□□□□ -2
Rnf20Q5DTM8 Gm22866-201ENSMUST00000083947 177 ntBASIC2.56□□□□□ -2
Rnf20Q5DTM8 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Rnf20Q5DTM8 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Rnf20Q5DTM8 Gm22963-201ENSMUST00000157960 91 ntBASIC2.55□□□□□ -2
Rnf20Q5DTM8 Gm22425-201ENSMUST00000158532 138 ntBASIC2.55□□□□□ -2
Rnf20Q5DTM8 Snord87-201ENSMUST00000175437 87 ntBASIC2.55□□□□□ -2
Rnf20Q5DTM8 CT571266.1-201ENSMUST00000222859 153 ntBASIC2.55□□□□□ -2
Rnf20Q5DTM8 Gm24523-201ENSMUST00000083965 132 ntBASIC2.55□□□□□ -2
Rnf20Q5DTM8 Gm23208-201ENSMUST00000158666 127 ntBASIC2.54□□□□□ -2
Rnf20Q5DTM8 Mir93-201ENSMUST00000083593 88 ntBASIC2.54□□□□□ -2
Rnf20Q5DTM8 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Rnf20Q5DTM8 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Rnf20Q5DTM8 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.53□□□□□ -2
Rnf20Q5DTM8 n-R5s39-201ENSMUST00000122613 108 ntBASIC2.53□□□□□ -2
Rnf20Q5DTM8 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.53□□□□□ -2
Rnf20Q5DTM8 Gm24237-201ENSMUST00000157790 132 ntBASIC2.53□□□□□ -2
Rnf20Q5DTM8 Gm25976-201ENSMUST00000158695 130 ntBASIC2.53□□□□□ -2
Rnf20Q5DTM8 Gm29535-201ENSMUST00000185723 109 ntBASIC2.53□□□□□ -2
Rnf20Q5DTM8 Gm28143-201ENSMUST00000191082 109 ntBASIC2.53□□□□□ -2
Rnf20Q5DTM8 Mir497-201ENSMUST00000200557 84 ntBASIC2.53□□□□□ -2
Rnf20Q5DTM8 Gm43977-201ENSMUST00000203970 189 ntBASIC2.53□□□□□ -2
Rnf20Q5DTM8 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.53□□□□□ -2
Rnf20Q5DTM8 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.52□□□□□ -2.01
Rnf20Q5DTM8 Gm26051-201ENSMUST00000104642 93 ntBASIC2.52□□□□□ -2.01
Rnf20Q5DTM8 Gm13433-201ENSMUST00000121701 240 ntBASIC2.52□□□□□ -2.01
Rnf20Q5DTM8 Gm22159-201ENSMUST00000158412 130 ntBASIC2.52□□□□□ -2.01
Rnf20Q5DTM8 Gm23351-201ENSMUST00000158427 125 ntBASIC2.52□□□□□ -2.01
Rnf20Q5DTM8 Gm24880-201ENSMUST00000158776 85 ntBASIC2.52□□□□□ -2.01
Rnf20Q5DTM8 Mir3057-201ENSMUST00000175040 91 ntBASIC2.52□□□□□ -2.01
Rnf20Q5DTM8 Snord50a-201ENSMUST00000178154 72 ntBASIC2.52□□□□□ -2.01
Rnf20Q5DTM8 Gm24463-201ENSMUST00000178417 72 ntBASIC2.52□□□□□ -2.01
Rnf20Q5DTM8 Mir6379-201ENSMUST00000183392 115 ntBASIC2.52□□□□□ -2.01
Rnf20Q5DTM8 Gm44966-201ENSMUST00000208096 157 ntBASIC2.52□□□□□ -2.01
Rnf20Q5DTM8 Gm25611-201ENSMUST00000104017 133 ntBASIC2.51□□□□□ -2.01
Rnf20Q5DTM8 Gm25011-201ENSMUST00000158398 126 ntBASIC2.51□□□□□ -2.01
Rnf20Q5DTM8 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.51□□□□□ -2.01
Rnf20Q5DTM8 Gm23375-201ENSMUST00000175407 83 ntBASIC2.51□□□□□ -2.01
Rnf20Q5DTM8 Gm22129-201ENSMUST00000179034 107 ntBASIC2.51□□□□□ -2.01
Rnf20Q5DTM8 Mir21c-201ENSMUST00000184910 78 ntBASIC2.51□□□□□ -2.01
Rnf20Q5DTM8 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Rnf20Q5DTM8 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.5□□□□□ -2.01
Rnf20Q5DTM8 Gm24907-201ENSMUST00000116932 128 ntBASIC2.5□□□□□ -2.01
Rnf20Q5DTM8 Gm11248-201ENSMUST00000119568 201 ntBASIC2.5□□□□□ -2.01
Rnf20Q5DTM8 Gm16550-201ENSMUST00000162550 126 ntBASIC2.5□□□□□ -2.01
Rnf20Q5DTM8 Gm25241-201ENSMUST00000174909 84 ntBASIC2.5□□□□□ -2.01
Rnf20Q5DTM8 Gm26217-201ENSMUST00000175212 84 ntBASIC2.5□□□□□ -2.01
Rnf20Q5DTM8 Gm27399-201ENSMUST00000184250 78 ntBASIC2.5□□□□□ -2.01
Rnf20Q5DTM8 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
Rnf20Q5DTM8 Gm25329-201ENSMUST00000158041 126 ntBASIC2.49□□□□□ -2.01
Rnf20Q5DTM8 Gm25044-201ENSMUST00000158603 104 ntBASIC2.49□□□□□ -2.01
Rnf20Q5DTM8 Gm26466-201ENSMUST00000179615 79 ntBASIC2.49□□□□□ -2.01
Rnf20Q5DTM8 Gm44320-201ENSMUST00000199276 86 ntBASIC2.49□□□□□ -2.01
Rnf20Q5DTM8 Gm23790-201ENSMUST00000083013 107 ntBASIC2.49□□□□□ -2.01
Rnf20Q5DTM8 Snora69-201ENSMUST00000083708 131 ntBASIC2.49□□□□□ -2.01
Rnf20Q5DTM8 Mir802-201ENSMUST00000103258 97 ntBASIC2.48□□□□□ -2.01
Rnf20Q5DTM8 Gm25529-201ENSMUST00000104850 92 ntBASIC2.48□□□□□ -2.01
Rnf20Q5DTM8 Gm22770-201ENSMUST00000158368 67 ntBASIC2.48□□□□□ -2.01
Rnf20Q5DTM8 Gm25949-201ENSMUST00000175333 114 ntBASIC2.48□□□□□ -2.01
Rnf20Q5DTM8 Gm25851-201ENSMUST00000082794 107 ntBASIC2.48□□□□□ -2.01
Rnf20Q5DTM8 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.47□□□□□ -2.01
Rnf20Q5DTM8 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Rnf20Q5DTM8 Mir7683-201ENSMUST00000183842 61 ntBASIC2.47□□□□□ -2.01
Rnf20Q5DTM8 Mir7016-201ENSMUST00000184308 72 ntBASIC2.47□□□□□ -2.01
Rnf20Q5DTM8 Gm44477-201ENSMUST00000199661 110 ntBASIC2.47□□□□□ -2.01
Rnf20Q5DTM8 Mir7217-201ENSMUST00000200304 62 ntBASIC2.47□□□□□ -2.01
Rnf20Q5DTM8 Mir107-201ENSMUST00000083660 87 ntBASIC2.47□□□□□ -2.01
Rnf20Q5DTM8 Snord7-201ENSMUST00000083781 97 ntBASIC2.47□□□□□ -2.01
Rnf20Q5DTM8 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.47□□□□□ -2.01
Rnf20Q5DTM8 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Rnf20Q5DTM8 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.46□□□□□ -2.02
Rnf20Q5DTM8 Gm25094-201ENSMUST00000103992 131 ntBASIC2.46□□□□□ -2.02
Rnf20Q5DTM8 Gm16328-201ENSMUST00000126985 196 ntBASIC2.46□□□□□ -2.02
Rnf20Q5DTM8 Gm23601-201ENSMUST00000157259 131 ntBASIC2.46□□□□□ -2.02
Rnf20Q5DTM8 Gm25368-201ENSMUST00000158847 131 ntBASIC2.46□□□□□ -2.02
Rnf20Q5DTM8 Gm27722-201ENSMUST00000183908 76 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 158.4 ms