Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm24958-201ENSMUST00000158009 97 ntBASIC2.24□□□□□ -2.05
Hoxd3P09027 Gm22732-201ENSMUST00000158093 121 ntBASIC2.24□□□□□ -2.05
Hoxd3P09027 Gm24575-201ENSMUST00000175502 77 ntBASIC2.24□□□□□ -2.05
Hoxd3P09027 Gm22884-201ENSMUST00000083127 140 ntBASIC2.24□□□□□ -2.05
Hoxd3P09027 Mir221-201ENSMUST00000083488 95 ntBASIC2.24□□□□□ -2.05
Hoxd3P09027 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Hoxd3P09027 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.24□□□□□ -2.05
Hoxd3P09027 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm23911-201ENSMUST00000104596 134 ntBASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm14588-201ENSMUST00000119895 172 ntBASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm25322-201ENSMUST00000122556 104 ntBASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm22961-201ENSMUST00000157964 106 ntBASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm16539-201ENSMUST00000160086 327 ntBASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm22858-201ENSMUST00000174972 76 ntBASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm23268-201ENSMUST00000175494 78 ntBASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm27419-201ENSMUST00000184576 109 ntBASIC2.23□□□□□ -2.05
Hoxd3P09027 Mir6405-201ENSMUST00000184584 124 ntBASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm27700-201ENSMUST00000185003 81 ntBASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm28900-201ENSMUST00000185232 156 ntBASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC2.23□□□□□ -2.05
Hoxd3P09027 Gm20305-201ENSMUST00000193226 177 ntBASIC2.23□□□□□ -2.05
Hoxd3P09027 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
Hoxd3P09027 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Hoxd3P09027 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Hoxd3P09027 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Hoxd3P09027 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.22□□□□□ -2.05
Hoxd3P09027 Gm23785-201ENSMUST00000116741 96 ntBASIC2.22□□□□□ -2.05
Hoxd3P09027 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.22□□□□□ -2.05
Hoxd3P09027 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.22□□□□□ -2.05
Hoxd3P09027 Gm24918-201ENSMUST00000083022 130 ntBASIC2.22□□□□□ -2.05
Hoxd3P09027 Gm26062-201ENSMUST00000083379 107 ntBASIC2.22□□□□□ -2.05
Hoxd3P09027 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Hoxd3P09027 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
Hoxd3P09027 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.22□□□□□ -2.05
Hoxd3P09027 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC2.21□□□□□ -2.05
Hoxd3P09027 Mir20b-201ENSMUST00000102087 80 ntBASIC2.21□□□□□ -2.06
Hoxd3P09027 Mir1197-201ENSMUST00000117037 120 ntBASIC2.21□□□□□ -2.06
Hoxd3P09027 Gm14884-201ENSMUST00000120456 196 ntBASIC2.21□□□□□ -2.06
Hoxd3P09027 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.21□□□□□ -2.06
Hoxd3P09027 Gm23325-201ENSMUST00000157422 129 ntBASIC2.21□□□□□ -2.06
Hoxd3P09027 Gm24199-201ENSMUST00000157808 136 ntBASIC2.21□□□□□ -2.06
Hoxd3P09027 Gm24399-201ENSMUST00000157869 74 ntBASIC2.21□□□□□ -2.06
Hoxd3P09027 Gm25949-201ENSMUST00000175333 114 ntBASIC2.21□□□□□ -2.06
Hoxd3P09027 Gm27532-201ENSMUST00000183726 113 ntBASIC2.21□□□□□ -2.06
Hoxd3P09027 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.21□□□□□ -2.06
Hoxd3P09027 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Hoxd3P09027 Gm22554-201ENSMUST00000157798 147 ntBASIC2.2□□□□□ -2.06
Hoxd3P09027 Gm26214-201ENSMUST00000158581 107 ntBASIC2.2□□□□□ -2.06
Hoxd3P09027 Gm16561-201ENSMUST00000163001 192 ntBASIC2.2□□□□□ -2.06
Hoxd3P09027 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.2□□□□□ -2.06
Hoxd3P09027 Mir7062-201ENSMUST00000185038 66 ntBASIC2.2□□□□□ -2.06
Hoxd3P09027 Gm27505-201ENSMUST00000185071 110 ntBASIC2.2□□□□□ -2.06
Hoxd3P09027 Gm34314-201ENSMUST00000203622 367 ntBASIC2.2□□□□□ -2.06
Hoxd3P09027 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Hoxd3P09027 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Hoxd3P09027 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Hoxd3P09027 Gm7209-201ENSMUST00000122339 333 ntBASIC2.19□□□□□ -2.06
Hoxd3P09027 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.19□□□□□ -2.06
Hoxd3P09027 Gm24868-201ENSMUST00000157265 136 ntBASIC2.19□□□□□ -2.06
Hoxd3P09027 Gm24077-201ENSMUST00000158183 136 ntBASIC2.19□□□□□ -2.06
Hoxd3P09027 Gm44526-201ENSMUST00000204664 121 ntBASIC2.19□□□□□ -2.06
Hoxd3P09027 Gm23570-201ENSMUST00000083029 104 ntBASIC2.19□□□□□ -2.06
Hoxd3P09027 Gm24523-201ENSMUST00000083965 132 ntBASIC2.19□□□□□ -2.06
Hoxd3P09027 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.18□□□□□ -2.06
Hoxd3P09027 Gm25466-201ENSMUST00000103995 132 ntBASIC2.18□□□□□ -2.06
Hoxd3P09027 Gm26473-201ENSMUST00000116763 127 ntBASIC2.18□□□□□ -2.06
Hoxd3P09027 Gm25945-201ENSMUST00000122484 135 ntBASIC2.18□□□□□ -2.06
Hoxd3P09027 Gm24691-201ENSMUST00000157762 140 ntBASIC2.18□□□□□ -2.06
Hoxd3P09027 Gm24879-201ENSMUST00000158386 143 ntBASIC2.18□□□□□ -2.06
Hoxd3P09027 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Hoxd3P09027 Snora24-201ENSMUST00000174989 130 ntBASIC2.18□□□□□ -2.06
Hoxd3P09027 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.18□□□□□ -2.06
Hoxd3P09027 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.18□□□□□ -2.06
Hoxd3P09027 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.17□□□□□ -2.06
Hoxd3P09027 Mir499-201ENSMUST00000102357 79 ntBASIC2.17□□□□□ -2.06
Hoxd3P09027 Gm25500-201ENSMUST00000104426 123 ntBASIC2.17□□□□□ -2.06
Hoxd3P09027 Gm24509-201ENSMUST00000157086 101 ntBASIC2.17□□□□□ -2.06
Hoxd3P09027 Gm25358-201ENSMUST00000157189 101 ntBASIC2.17□□□□□ -2.06
Hoxd3P09027 Gm25280-201ENSMUST00000157269 101 ntBASIC2.17□□□□□ -2.06
Hoxd3P09027 Gm25014-201ENSMUST00000158401 103 ntBASIC2.17□□□□□ -2.06
Hoxd3P09027 Gm24223-201ENSMUST00000158827 90 ntBASIC2.17□□□□□ -2.06
Hoxd3P09027 Mir6917-201ENSMUST00000184111 61 ntBASIC2.17□□□□□ -2.06
Hoxd3P09027 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Hoxd3P09027 Gm45197-201ENSMUST00000205288 151 ntBASIC2.17□□□□□ -2.06
Hoxd3P09027 Gm25788-201ENSMUST00000082721 131 ntBASIC2.17□□□□□ -2.06
Hoxd3P09027 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Hoxd3P09027 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Hoxd3P09027 Scarna9-201ENSMUST00000104318 70 ntBASIC2.16□□□□□ -2.06
Hoxd3P09027 Mir654-201ENSMUST00000104787 84 ntBASIC2.16□□□□□ -2.06
Hoxd3P09027 Gm22151-201ENSMUST00000116963 58 ntBASIC2.16□□□□□ -2.06
Hoxd3P09027 Gm23763-201ENSMUST00000158345 60 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 172.1 ms