Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 AC159896.1-201ENSMUST00000215264 215 ntBASIC-0.31□□□□□ -2.46
Ubr1O70481 AC145736.2-201ENSMUST00000216305 365 ntBASIC-0.31□□□□□ -2.46
Ubr1O70481 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.31□□□□□ -2.46
Ubr1O70481 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.32□□□□□ -2.46
Ubr1O70481 Mir759-201ENSMUST00000103254 98 ntBASIC-0.32□□□□□ -2.46
Ubr1O70481 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.32□□□□□ -2.46
Ubr1O70481 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.32□□□□□ -2.46
Ubr1O70481 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.32□□□□□ -2.46
Ubr1O70481 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.32□□□□□ -2.46
Ubr1O70481 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.32□□□□□ -2.46
Ubr1O70481 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.32□□□□□ -2.46
Ubr1O70481 Gm24296-201ENSMUST00000158297 106 ntBASIC-0.32□□□□□ -2.46
Ubr1O70481 Gm23262-201ENSMUST00000158323 168 ntBASIC-0.32□□□□□ -2.46
Ubr1O70481 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.32□□□□□ -2.46
Ubr1O70481 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.32□□□□□ -2.46
Ubr1O70481 Gm25142-201ENSMUST00000082698 107 ntBASIC-0.32□□□□□ -2.46
Ubr1O70481 Gm25875-201ENSMUST00000104323 107 ntBASIC-0.33□□□□□ -2.46
Ubr1O70481 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.33□□□□□ -2.46
Ubr1O70481 Gm6952-201ENSMUST00000118629 159 ntBASIC-0.33□□□□□ -2.46
Ubr1O70481 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.33□□□□□ -2.46
Ubr1O70481 Gm25828-201ENSMUST00000157087 95 ntBASIC-0.33□□□□□ -2.46
Ubr1O70481 Gm24192-201ENSMUST00000157978 145 ntBASIC-0.33□□□□□ -2.46
Ubr1O70481 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.33□□□□□ -2.46
Ubr1O70481 AC108945.1-201ENSMUST00000226477 94 ntBASIC-0.33□□□□□ -2.46
Ubr1O70481 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.34□□□□□ -2.46
Ubr1O70481 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC-0.34□□□□□ -2.46
Ubr1O70481 Gm23655-201ENSMUST00000122627 105 ntBASIC-0.34□□□□□ -2.46
Ubr1O70481 Gm22767-201ENSMUST00000158365 165 ntBASIC-0.34□□□□□ -2.46
Ubr1O70481 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.34□□□□□ -2.46
Ubr1O70481 Gm24501-201ENSMUST00000158452 62 ntBASIC-0.34□□□□□ -2.46
Ubr1O70481 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.34□□□□□ -2.46
Ubr1O70481 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.34□□□□□ -2.46
Ubr1O70481 Mir18-201ENSMUST00000083469 96 ntBASIC-0.34□□□□□ -2.46
Ubr1O70481 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-0.34□□□□□ -2.46
Ubr1O70481 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.34□□□□□ -2.46
Ubr1O70481 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.34□□□□□ -2.46
Ubr1O70481 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.34□□□□□ -2.46
Ubr1O70481 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
Ubr1O70481 Gm44149-201ENSMUST00000204256 226 ntBASIC-0.34□□□□□ -2.46
Ubr1O70481 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.34□□□□□ -2.46
Ubr1O70481 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.34□□□□□ -2.46
Ubr1O70481 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.34□□□□□ -2.46
Ubr1O70481 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.34□□□□□ -2.46
Ubr1O70481 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-0.35□□□□□ -2.47
Ubr1O70481 Gm25848-201ENSMUST00000116790 144 ntBASIC-0.35□□□□□ -2.47
Ubr1O70481 Gm22051-201ENSMUST00000117002 127 ntBASIC-0.35□□□□□ -2.47
Ubr1O70481 Gm25267-201ENSMUST00000158522 63 ntBASIC-0.35□□□□□ -2.47
Ubr1O70481 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC-0.35□□□□□ -2.47
Ubr1O70481 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.35□□□□□ -2.47
Ubr1O70481 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-0.35□□□□□ -2.47
Ubr1O70481 Gm24204-201ENSMUST00000082950 107 ntBASIC-0.35□□□□□ -2.47
Ubr1O70481 Gm26479-201ENSMUST00000122620 106 ntBASIC-0.36□□□□□ -2.47
Ubr1O70481 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.36□□□□□ -2.47
Ubr1O70481 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.36□□□□□ -2.47
Ubr1O70481 Gm14307-201ENSMUST00000118930 291 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Gm14297-201ENSMUST00000129110 291 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Gm16362-201ENSMUST00000135189 214 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Gm38050-201ENSMUST00000191904 238 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Gm23763-201ENSMUST00000158345 60 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Mir669k-201ENSMUST00000177742 127 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Gm25673-201ENSMUST00000179957 127 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Gm44959-201ENSMUST00000209127 231 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Mir532-201ENSMUST00000093630 96 ntBASIC-0.37□□□□□ -2.47
Ubr1O70481 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.38□□□□□ -2.47
Ubr1O70481 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC-0.38□□□□□ -2.47
Ubr1O70481 Gm25769-201ENSMUST00000158569 127 ntBASIC-0.38□□□□□ -2.47
Ubr1O70481 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.38□□□□□ -2.47
Ubr1O70481 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.38□□□□□ -2.47
Ubr1O70481 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.38□□□□□ -2.47
Ubr1O70481 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.38□□□□□ -2.47
Ubr1O70481 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.38□□□□□ -2.47
Ubr1O70481 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.38□□□□□ -2.47
Ubr1O70481 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.38□□□□□ -2.47
Ubr1O70481 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.38□□□□□ -2.47
Ubr1O70481 CT025603.4-201ENSMUST00000225777 413 ntBASIC-0.38□□□□□ -2.47
Ubr1O70481 Gm24509-201ENSMUST00000157086 101 ntBASIC-0.39□□□□□ -2.47
Ubr1O70481 Gm25358-201ENSMUST00000157189 101 ntBASIC-0.39□□□□□ -2.47
Ubr1O70481 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.39□□□□□ -2.47
Ubr1O70481 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.39□□□□□ -2.47
Ubr1O70481 Gm26076-201ENSMUST00000104065 105 ntBASIC-0.4□□□□□ -2.47
Ubr1O70481 Gm13345-201ENSMUST00000121928 228 ntBASIC-0.4□□□□□ -2.47
Ubr1O70481 Gm22985-201ENSMUST00000122754 116 ntBASIC-0.4□□□□□ -2.47
Ubr1O70481 Gm26401-201ENSMUST00000158502 76 ntBASIC-0.4□□□□□ -2.47
Ubr1O70481 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.4□□□□□ -2.47
Ubr1O70481 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.4□□□□□ -2.47
Ubr1O70481 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 133.2 ms