Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Gm24559-201ENSMUST00000157519 121 ntBASIC1.12□□□□□ -2.23
Pja1O55176 Gm22850-201ENSMUST00000157714 82 ntBASIC1.12□□□□□ -2.23
Pja1O55176 Gm28862-201ENSMUST00000188246 163 ntBASIC1.12□□□□□ -2.23
Pja1O55176 Gm25128-201ENSMUST00000083339 76 ntBASIC1.12□□□□□ -2.23
Pja1O55176 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Pja1O55176 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.11□□□□□ -2.23
Pja1O55176 Gm22233-201ENSMUST00000157464 114 ntBASIC1.11□□□□□ -2.23
Pja1O55176 Gm26415-201ENSMUST00000157673 292 ntBASIC1.11□□□□□ -2.23
Pja1O55176 Gm25868-201ENSMUST00000158253 114 ntBASIC1.11□□□□□ -2.23
Pja1O55176 Gm25267-201ENSMUST00000158522 63 ntBASIC1.11□□□□□ -2.23
Pja1O55176 Gm26029-201ENSMUST00000158659 132 ntBASIC1.11□□□□□ -2.23
Pja1O55176 Mir1966-201ENSMUST00000158807 108 ntBASIC1.11□□□□□ -2.23
Pja1O55176 Gm26360-201ENSMUST00000158872 103 ntBASIC1.11□□□□□ -2.23
Pja1O55176 Gm28669-201ENSMUST00000188400 100 ntBASIC1.11□□□□□ -2.23
Pja1O55176 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.11□□□□□ -2.23
Pja1O55176 Gm25588-201ENSMUST00000082501 140 ntBASIC1.11□□□□□ -2.23
Pja1O55176 Gm26326-201ENSMUST00000083070 129 ntBASIC1.11□□□□□ -2.23
Pja1O55176 Mir22-201ENSMUST00000083595 95 ntBASIC1.11□□□□□ -2.23
Pja1O55176 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Pja1O55176 Gm16186-201ENSMUST00000120132 216 ntBASIC1.1□□□□□ -2.23
Pja1O55176 Gm25323-201ENSMUST00000122555 103 ntBASIC1.1□□□□□ -2.23
Pja1O55176 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.1□□□□□ -2.23
Pja1O55176 Gm23080-201ENSMUST00000157846 103 ntBASIC1.1□□□□□ -2.23
Pja1O55176 Gm23083-201ENSMUST00000157851 116 ntBASIC1.1□□□□□ -2.23
Pja1O55176 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.1□□□□□ -2.23
Pja1O55176 Gm27420-201ENSMUST00000183823 79 ntBASIC1.1□□□□□ -2.23
Pja1O55176 Gm27792-201ENSMUST00000184031 115 ntBASIC1.1□□□□□ -2.23
Pja1O55176 Gm43911-201ENSMUST00000203097 76 ntBASIC1.1□□□□□ -2.23
Pja1O55176 Gm24461-201ENSMUST00000082735 103 ntBASIC1.1□□□□□ -2.23
Pja1O55176 Gm25851-201ENSMUST00000082794 107 ntBASIC1.1□□□□□ -2.23
Pja1O55176 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Pja1O55176 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Pja1O55176 Gm44489-201ENSMUST00000104619 97 ntBASIC1.09□□□□□ -2.23
Pja1O55176 Gm11644-201ENSMUST00000119735 150 ntBASIC1.09□□□□□ -2.23
Pja1O55176 Gm22381-201ENSMUST00000158186 107 ntBASIC1.09□□□□□ -2.23
Pja1O55176 Gm25920-201ENSMUST00000158307 99 ntBASIC1.09□□□□□ -2.23
Pja1O55176 Gm23114-201ENSMUST00000158478 117 ntBASIC1.09□□□□□ -2.23
Pja1O55176 Gm26291-201ENSMUST00000158889 137 ntBASIC1.09□□□□□ -2.23
Pja1O55176 Gm26073-201ENSMUST00000179906 127 ntBASIC1.09□□□□□ -2.23
Pja1O55176 Mir6380-201ENSMUST00000184334 81 ntBASIC1.09□□□□□ -2.23
Pja1O55176 Gm44057-201ENSMUST00000204547 96 ntBASIC1.09□□□□□ -2.23
Pja1O55176 Gm23722-201ENSMUST00000083002 130 ntBASIC1.09□□□□□ -2.23
Pja1O55176 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.08□□□□□ -2.24
Pja1O55176 Gm22780-201ENSMUST00000104084 132 ntBASIC1.08□□□□□ -2.24
Pja1O55176 Gm24345-201ENSMUST00000158706 124 ntBASIC1.08□□□□□ -2.24
Pja1O55176 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.08□□□□□ -2.24
Pja1O55176 Gm44396-201ENSMUST00000199843 114 ntBASIC1.08□□□□□ -2.24
Pja1O55176 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.08□□□□□ -2.24
Pja1O55176 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.08□□□□□ -2.24
Pja1O55176 Gm25797-201ENSMUST00000082640 107 ntBASIC1.08□□□□□ -2.24
Pja1O55176 Snord61-201ENSMUST00000083176 71 ntBASIC1.08□□□□□ -2.24
Pja1O55176 Mir201-201ENSMUST00000083470 66 ntBASIC1.08□□□□□ -2.24
Pja1O55176 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.08□□□□□ -2.24
Pja1O55176 Mir466b-3-201ENSMUST00000103806 81 ntBASIC1.07□□□□□ -2.24
Pja1O55176 Gm26011-201ENSMUST00000104410 104 ntBASIC1.07□□□□□ -2.24
Pja1O55176 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Pja1O55176 Gm22105-201ENSMUST00000116734 116 ntBASIC1.07□□□□□ -2.24
Pja1O55176 Gm24717-201ENSMUST00000157522 124 ntBASIC1.07□□□□□ -2.24
Pja1O55176 Gm25771-201ENSMUST00000158565 144 ntBASIC1.07□□□□□ -2.24
Pja1O55176 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.07□□□□□ -2.24
Pja1O55176 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Pja1O55176 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.07□□□□□ -2.24
Pja1O55176 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Pja1O55176 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.07□□□□□ -2.24
Pja1O55176 Gm23239-201ENSMUST00000083006 181 ntBASIC1.07□□□□□ -2.24
Pja1O55176 Gm22738-201ENSMUST00000083440 147 ntBASIC1.07□□□□□ -2.24
Pja1O55176 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.07□□□□□ -2.24
Pja1O55176 Gm22576-201ENSMUST00000083733 104 ntBASIC1.07□□□□□ -2.24
Pja1O55176 Gm24605-201ENSMUST00000104772 96 ntBASIC1.06□□□□□ -2.24
Pja1O55176 Mir654-201ENSMUST00000104787 84 ntBASIC1.06□□□□□ -2.24
Pja1O55176 Snord100-201ENSMUST00000116836 74 ntBASIC1.06□□□□□ -2.24
Pja1O55176 Gm13246-201ENSMUST00000120994 315 ntBASIC1.06□□□□□ -2.24
Pja1O55176 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC1.06□□□□□ -2.24
Pja1O55176 Gm23337-201ENSMUST00000158959 118 ntBASIC1.06□□□□□ -2.24
Pja1O55176 Gm22775-201ENSMUST00000177630 120 ntBASIC1.06□□□□□ -2.24
Pja1O55176 Gm23567-201ENSMUST00000178005 107 ntBASIC1.06□□□□□ -2.24
Pja1O55176 Gm23569-201ENSMUST00000180120 120 ntBASIC1.06□□□□□ -2.24
Pja1O55176 Gm38364-201ENSMUST00000191814 179 ntBASIC1.06□□□□□ -2.24
Pja1O55176 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Pja1O55176 Gm43898-201ENSMUST00000204456 424 ntBASIC1.06□□□□□ -2.24
Pja1O55176 Gm45492-201ENSMUST00000211611 288 ntBASIC1.06□□□□□ -2.24
Pja1O55176 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.06□□□□□ -2.24
Pja1O55176 Gm24616-201ENSMUST00000083274 139 ntBASIC1.06□□□□□ -2.24
Pja1O55176 Gm24252-201ENSMUST00000083700 132 ntBASIC1.06□□□□□ -2.24
Pja1O55176 Gm26082-201ENSMUST00000104070 127 ntBASIC1.05□□□□□ -2.24
Pja1O55176 Gm24777-201ENSMUST00000157644 107 ntBASIC1.05□□□□□ -2.24
Pja1O55176 Gm24000-201ENSMUST00000158063 89 ntBASIC1.05□□□□□ -2.24
Pja1O55176 Gm23636-201ENSMUST00000175070 95 ntBASIC1.05□□□□□ -2.24
Pja1O55176 Gm25949-201ENSMUST00000175333 114 ntBASIC1.05□□□□□ -2.24
Pja1O55176 Gm24167-201ENSMUST00000177733 124 ntBASIC1.05□□□□□ -2.24
Pja1O55176 Gm24028-201ENSMUST00000178991 124 ntBASIC1.05□□□□□ -2.24
Pja1O55176 Gm18665-201ENSMUST00000189783 270 ntBASIC1.05□□□□□ -2.24
Pja1O55176 Gm22283-201ENSMUST00000082556 161 ntBASIC1.05□□□□□ -2.24
Pja1O55176 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Pja1O55176 Gm26076-201ENSMUST00000104065 105 ntBASIC1.04□□□□□ -2.24
Pja1O55176 Gm14567-201ENSMUST00000117155 174 ntBASIC1.04□□□□□ -2.24
Pja1O55176 Gm14502-201ENSMUST00000118154 113 ntBASIC1.04□□□□□ -2.24
Pja1O55176 Gm26091-201ENSMUST00000122704 82 ntBASIC1.04□□□□□ -2.24
Pja1O55176 Gm24747-201ENSMUST00000157835 87 ntBASIC1.04□□□□□ -2.24
Pja1O55176 Gm22966-201ENSMUST00000157957 129 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 144.2 ms