Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.22□□□□□ -2.37
Pcdhgb8A0A140LI48 Gm24764-201ENSMUST00000083686 199 ntBASIC0.22□□□□□ -2.37
Pcdhgb8A0A140LI48 Gm22576-201ENSMUST00000083733 104 ntBASIC0.22□□□□□ -2.37
Pcdhgb8A0A140LI48 Gm13345-201ENSMUST00000121928 228 ntBASIC0.21□□□□□ -2.38
Pcdhgb8A0A140LI48 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.21□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm23994-201ENSMUST00000158059 88 ntBASIC0.21□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm23180-201ENSMUST00000158686 125 ntBASIC0.21□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm24415-201ENSMUST00000180218 107 ntBASIC0.21□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.21□□□□□ -2.38
Pcdhgb8A0A140LI48 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.21□□□□□ -2.38
Pcdhgb8A0A140LI48 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.2□□□□□ -2.38
Pcdhgb8A0A140LI48 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.2□□□□□ -2.38
Pcdhgb8A0A140LI48 Scarna8-201ENSMUST00000158333 131 ntBASIC0.2□□□□□ -2.38
Pcdhgb8A0A140LI48 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.2□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm27402-201ENSMUST00000183890 120 ntBASIC0.2□□□□□ -2.38
Pcdhgb8A0A140LI48 Mir6365-201ENSMUST00000183990 101 ntBASIC0.2□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm19790-201ENSMUST00000214414 251 ntBASIC0.2□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm22358-201ENSMUST00000082877 122 ntBASIC0.2□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm25188-201ENSMUST00000083913 122 ntBASIC0.2□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.19□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm23531-201ENSMUST00000104567 68 ntBASIC0.19□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm22479-201ENSMUST00000122566 81 ntBASIC0.19□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm23466-201ENSMUST00000157133 106 ntBASIC0.19□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm22434-201ENSMUST00000158549 122 ntBASIC0.19□□□□□ -2.38
Pcdhgb8A0A140LI48 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.19□□□□□ -2.38
Pcdhgb8A0A140LI48 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.19□□□□□ -2.38
Pcdhgb8A0A140LI48 Snord95-201ENSMUST00000082846 68 ntBASIC0.19□□□□□ -2.38
Pcdhgb8A0A140LI48 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.19□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm26421-201ENSMUST00000104279 132 ntBASIC0.18□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm6952-201ENSMUST00000118629 159 ntBASIC0.18□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm22239-201ENSMUST00000175220 103 ntBASIC0.18□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm38364-201ENSMUST00000191814 179 ntBASIC0.18□□□□□ -2.38
Pcdhgb8A0A140LI48 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.18□□□□□ -2.38
Pcdhgb8A0A140LI48 Mir181a-2-201ENSMUST00000083489 76 ntBASIC0.18□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm26076-201ENSMUST00000104065 105 ntBASIC0.17□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm22088-201ENSMUST00000158341 117 ntBASIC0.17□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.17□□□□□ -2.38
Pcdhgb8A0A140LI48 Mir3108-201ENSMUST00000175500 79 ntBASIC0.17□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm27717-201ENSMUST00000183933 151 ntBASIC0.17□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm23301-201ENSMUST00000082713 65 ntBASIC0.17□□□□□ -2.38
Pcdhgb8A0A140LI48 Mir669f-201ENSMUST00000103850 121 ntBASIC0.16□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm27993-201ENSMUST00000184362 85 ntBASIC0.16□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm28767-201ENSMUST00000188601 114 ntBASIC0.16□□□□□ -2.38
Pcdhgb8A0A140LI48 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC0.16□□□□□ -2.38
Pcdhgb8A0A140LI48 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.16□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm22753-201ENSMUST00000083657 107 ntBASIC0.16□□□□□ -2.38
Pcdhgb8A0A140LI48 Mir532-201ENSMUST00000093630 96 ntBASIC0.16□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.16□□□□□ -2.38
Pcdhgb8A0A140LI48 Gm24867-201ENSMUST00000104161 107 ntBASIC0.15□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm24833-201ENSMUST00000116775 120 ntBASIC0.15□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm14567-201ENSMUST00000117155 174 ntBASIC0.15□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm14792-201ENSMUST00000119725 258 ntBASIC0.15□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm25444-201ENSMUST00000158999 113 ntBASIC0.15□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm16550-201ENSMUST00000162550 126 ntBASIC0.15□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm25952-201ENSMUST00000175329 74 ntBASIC0.15□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm27943-201ENSMUST00000184844 116 ntBASIC0.15□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm24929-201ENSMUST00000083403 139 ntBASIC0.15□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm23278-201ENSMUST00000157911 143 ntBASIC0.14□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm22520-201ENSMUST00000158269 129 ntBASIC0.14□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm25771-201ENSMUST00000158565 144 ntBASIC0.14□□□□□ -2.39
Pcdhgb8A0A140LI48 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.14□□□□□ -2.39
Pcdhgb8A0A140LI48 Mir6390-201ENSMUST00000184405 129 ntBASIC0.14□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm23345-201ENSMUST00000083817 150 ntBASIC0.14□□□□□ -2.39
Pcdhgb8A0A140LI48 Snord100-201ENSMUST00000116836 74 ntBASIC0.13□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm14039-201ENSMUST00000118705 101 ntBASIC0.13□□□□□ -2.39
Pcdhgb8A0A140LI48 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.13□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm23581-201ENSMUST00000158531 63 ntBASIC0.13□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm25364-201ENSMUST00000158851 107 ntBASIC0.13□□□□□ -2.39
Pcdhgb8A0A140LI48 Mir6951-201ENSMUST00000183910 75 ntBASIC0.13□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm44373-201ENSMUST00000196112 169 ntBASIC0.13□□□□□ -2.39
Pcdhgb8A0A140LI48 AL603630.1-201ENSMUST00000214781 147 ntBASIC0.13□□□□□ -2.39
Pcdhgb8A0A140LI48 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.13□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm25512-201ENSMUST00000083863 107 ntBASIC0.13□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm25362-201ENSMUST00000158854 105 ntBASIC0.12□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm26160-201ENSMUST00000158965 63 ntBASIC0.12□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm44457-201ENSMUST00000198109 76 ntBASIC0.12□□□□□ -2.39
Pcdhgb8A0A140LI48 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
Pcdhgb8A0A140LI48 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
Pcdhgb8A0A140LI48 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm25885-201ENSMUST00000157779 109 ntBASIC0.11□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm24467-201ENSMUST00000157887 126 ntBASIC0.11□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm23761-201ENSMUST00000158347 104 ntBASIC0.11□□□□□ -2.39
Pcdhgb8A0A140LI48 Mir100-201ENSMUST00000175270 80 ntBASIC0.11□□□□□ -2.39
Pcdhgb8A0A140LI48 Mir8107-201ENSMUST00000184024 117 ntBASIC0.11□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.11□□□□□ -2.39
Pcdhgb8A0A140LI48 AC109214.2-201ENSMUST00000220089 358 ntBASIC0.11□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm25497-201ENSMUST00000104425 132 ntBASIC0.1□□□□□ -2.39
Pcdhgb8A0A140LI48 Mir669i-201ENSMUST00000117007 127 ntBASIC0.1□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm11388-201ENSMUST00000120908 159 ntBASIC0.1□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm25769-201ENSMUST00000158569 127 ntBASIC0.1□□□□□ -2.39
Pcdhgb8A0A140LI48 Mir3089-201ENSMUST00000175350 84 ntBASIC0.1□□□□□ -2.39
Pcdhgb8A0A140LI48 Snord82-201ENSMUST00000082889 70 ntBASIC0.1□□□□□ -2.39
Pcdhgb8A0A140LI48 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.1□□□□□ -2.39
Pcdhgb8A0A140LI48 Gm22048-201ENSMUST00000104721 89 ntBASIC0.09□□□□□ -2.4
Pcdhgb8A0A140LI48 Gm23214-201ENSMUST00000122716 157 ntBASIC0.09□□□□□ -2.4
Pcdhgb8A0A140LI48 AC116460.1-201ENSMUST00000219040 313 ntBASIC0.09□□□□□ -2.4
Pcdhgb8A0A140LI48 mt-Tr-201ENSMUST00000082412 68 ntBASIC0.09□□□□□ -2.4
Pcdhgb8A0A140LI48 Gm25135-201ENSMUST00000082648 143 ntBASIC0.09□□□□□ -2.4
Pcdhgb8A0A140LI48 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
Pcdhgb8A0A140LI48 Mir670-201ENSMUST00000102380 100 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 150.3 ms