Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm15069-201ENSMUST00000117792 192 ntBASIC0.32□□□□□ -2.36
Cldn9Q9Z0S7 Gm15068-201ENSMUST00000119796 192 ntBASIC0.32□□□□□ -2.36
Cldn9Q9Z0S7 Gm13246-201ENSMUST00000120994 315 ntBASIC0.32□□□□□ -2.36
Cldn9Q9Z0S7 Gm25424-201ENSMUST00000157612 58 ntBASIC0.32□□□□□ -2.36
Cldn9Q9Z0S7 Gm25882-201ENSMUST00000157784 85 ntBASIC0.32□□□□□ -2.36
Cldn9Q9Z0S7 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC0.32□□□□□ -2.36
Cldn9Q9Z0S7 Gm28579-201ENSMUST00000186143 369 ntBASIC0.32□□□□□ -2.36
Cldn9Q9Z0S7 Mir7227-201ENSMUST00000200408 59 ntBASIC0.32□□□□□ -2.36
Cldn9Q9Z0S7 Gm44828-201ENSMUST00000203745 106 ntBASIC0.32□□□□□ -2.36
Cldn9Q9Z0S7 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.32□□□□□ -2.36
Cldn9Q9Z0S7 Gm26497-201ENSMUST00000083146 107 ntBASIC0.32□□□□□ -2.36
Cldn9Q9Z0S7 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.32□□□□□ -2.36
Cldn9Q9Z0S7 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Cldn9Q9Z0S7 Mir710-201ENSMUST00000102088 110 ntBASIC0.31□□□□□ -2.36
Cldn9Q9Z0S7 Gm26303-201ENSMUST00000116845 119 ntBASIC0.31□□□□□ -2.36
Cldn9Q9Z0S7 Gm12924-201ENSMUST00000121747 318 ntBASIC0.31□□□□□ -2.36
Cldn9Q9Z0S7 Gm22586-201ENSMUST00000157507 122 ntBASIC0.31□□□□□ -2.36
Cldn9Q9Z0S7 Gm26159-201ENSMUST00000158968 104 ntBASIC0.31□□□□□ -2.36
Cldn9Q9Z0S7 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.31□□□□□ -2.36
Cldn9Q9Z0S7 Gm24527-201ENSMUST00000082920 107 ntBASIC0.31□□□□□ -2.36
Cldn9Q9Z0S7 Gm25108-201ENSMUST00000122473 78 ntBASIC0.3□□□□□ -2.36
Cldn9Q9Z0S7 Gm24963-201ENSMUST00000157916 144 ntBASIC0.3□□□□□ -2.36
Cldn9Q9Z0S7 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.3□□□□□ -2.36
Cldn9Q9Z0S7 Gm22448-201ENSMUST00000179254 107 ntBASIC0.3□□□□□ -2.36
Cldn9Q9Z0S7 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.3□□□□□ -2.36
Cldn9Q9Z0S7 Gm44563-201ENSMUST00000207958 178 ntBASIC0.3□□□□□ -2.36
Cldn9Q9Z0S7 Gm12837-201ENSMUST00000120131 373 ntBASIC0.29□□□□□ -2.36
Cldn9Q9Z0S7 Gm25318-201ENSMUST00000122554 314 ntBASIC0.29□□□□□ -2.36
Cldn9Q9Z0S7 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.29□□□□□ -2.36
Cldn9Q9Z0S7 Gm22706-201ENSMUST00000157907 112 ntBASIC0.29□□□□□ -2.36
Cldn9Q9Z0S7 Gm25024-201ENSMUST00000179667 104 ntBASIC0.29□□□□□ -2.36
Cldn9Q9Z0S7 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.29□□□□□ -2.36
Cldn9Q9Z0S7 Gm25142-201ENSMUST00000082698 107 ntBASIC0.29□□□□□ -2.36
Cldn9Q9Z0S7 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.28□□□□□ -2.36
Cldn9Q9Z0S7 Gm26152-201ENSMUST00000157427 101 ntBASIC0.28□□□□□ -2.36
Cldn9Q9Z0S7 Gm22983-201ENSMUST00000158308 104 ntBASIC0.28□□□□□ -2.36
Cldn9Q9Z0S7 Gm24547-201ENSMUST00000158649 149 ntBASIC0.28□□□□□ -2.36
Cldn9Q9Z0S7 Mir6377-201ENSMUST00000183760 114 ntBASIC0.28□□□□□ -2.36
Cldn9Q9Z0S7 Gm28008-201ENSMUST00000184021 186 ntBASIC0.28□□□□□ -2.36
Cldn9Q9Z0S7 Gm27521-201ENSMUST00000184022 64 ntBASIC0.28□□□□□ -2.36
Cldn9Q9Z0S7 Gm23406-201ENSMUST00000082537 122 ntBASIC0.28□□□□□ -2.36
Cldn9Q9Z0S7 Gm15289-201ENSMUST00000117793 244 ntBASIC0.27□□□□□ -2.37
Cldn9Q9Z0S7 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.27□□□□□ -2.37
Cldn9Q9Z0S7 Gm25772-201ENSMUST00000158574 56 ntBASIC0.27□□□□□ -2.37
Cldn9Q9Z0S7 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Cldn9Q9Z0S7 AC154552.1-201ENSMUST00000222969 202 ntBASIC0.27□□□□□ -2.37
Cldn9Q9Z0S7 Gm24559-201ENSMUST00000157519 121 ntBASIC0.26□□□□□ -2.37
Cldn9Q9Z0S7 Gm25664-201ENSMUST00000157697 107 ntBASIC0.26□□□□□ -2.37
Cldn9Q9Z0S7 Gm24500-201ENSMUST00000158447 124 ntBASIC0.26□□□□□ -2.37
Cldn9Q9Z0S7 Gm24549-201ENSMUST00000158647 139 ntBASIC0.26□□□□□ -2.37
Cldn9Q9Z0S7 Gm22466-201ENSMUST00000175278 69 ntBASIC0.26□□□□□ -2.37
Cldn9Q9Z0S7 Gm29140-201ENSMUST00000190187 476 ntBASIC0.26□□□□□ -2.37
Cldn9Q9Z0S7 Gm43505-201ENSMUST00000200579 139 ntBASIC0.26□□□□□ -2.37
Cldn9Q9Z0S7 Gm45541-201ENSMUST00000210443 54 ntBASIC0.26□□□□□ -2.37
Cldn9Q9Z0S7 Gm26447-201ENSMUST00000082448 129 ntBASIC0.26□□□□□ -2.37
Cldn9Q9Z0S7 Gm25814-201ENSMUST00000082754 107 ntBASIC0.26□□□□□ -2.37
Cldn9Q9Z0S7 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.25□□□□□ -2.37
Cldn9Q9Z0S7 Gm25611-201ENSMUST00000104017 133 ntBASIC0.25□□□□□ -2.37
Cldn9Q9Z0S7 Snord69-201ENSMUST00000104024 80 ntBASIC0.25□□□□□ -2.37
Cldn9Q9Z0S7 Gm22784-201ENSMUST00000104088 132 ntBASIC0.25□□□□□ -2.37
Cldn9Q9Z0S7 Gm12797-201ENSMUST00000118645 273 ntBASIC0.25□□□□□ -2.37
Cldn9Q9Z0S7 Gm23655-201ENSMUST00000122627 105 ntBASIC0.25□□□□□ -2.37
Cldn9Q9Z0S7 Gm22962-201ENSMUST00000157962 73 ntBASIC0.25□□□□□ -2.37
Cldn9Q9Z0S7 Mir466m-201ENSMUST00000175052 84 ntBASIC0.25□□□□□ -2.37
Cldn9Q9Z0S7 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.25□□□□□ -2.37
Cldn9Q9Z0S7 Gm13922-201ENSMUST00000119505 156 ntBASIC0.24□□□□□ -2.37
Cldn9Q9Z0S7 Gm13797-201ENSMUST00000121792 120 ntBASIC0.24□□□□□ -2.37
Cldn9Q9Z0S7 Gm24635-201ENSMUST00000122712 128 ntBASIC0.24□□□□□ -2.37
Cldn9Q9Z0S7 Gm24392-201ENSMUST00000158136 103 ntBASIC0.24□□□□□ -2.37
Cldn9Q9Z0S7 Gm26287-201ENSMUST00000158887 81 ntBASIC0.24□□□□□ -2.37
Cldn9Q9Z0S7 Gm24667-201ENSMUST00000158938 103 ntBASIC0.24□□□□□ -2.37
Cldn9Q9Z0S7 Gm25241-201ENSMUST00000174909 84 ntBASIC0.24□□□□□ -2.37
Cldn9Q9Z0S7 Gm26217-201ENSMUST00000175212 84 ntBASIC0.24□□□□□ -2.37
Cldn9Q9Z0S7 Gm44464-201ENSMUST00000198010 138 ntBASIC0.24□□□□□ -2.37
Cldn9Q9Z0S7 Gm44468-201ENSMUST00000199516 105 ntBASIC0.24□□□□□ -2.37
Cldn9Q9Z0S7 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0.24□□□□□ -2.37
Cldn9Q9Z0S7 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Cldn9Q9Z0S7 Gm22767-201ENSMUST00000158365 165 ntBASIC0.23□□□□□ -2.37
Cldn9Q9Z0S7 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.23□□□□□ -2.37
Cldn9Q9Z0S7 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.23□□□□□ -2.37
Cldn9Q9Z0S7 Gm25300-201ENSMUST00000175284 84 ntBASIC0.23□□□□□ -2.37
Cldn9Q9Z0S7 Gm22887-201ENSMUST00000178586 107 ntBASIC0.23□□□□□ -2.37
Cldn9Q9Z0S7 Gm27475-201ENSMUST00000183420 61 ntBASIC0.23□□□□□ -2.37
Cldn9Q9Z0S7 Gm27402-201ENSMUST00000183890 120 ntBASIC0.23□□□□□ -2.37
Cldn9Q9Z0S7 Mir7065-201ENSMUST00000185110 61 ntBASIC0.23□□□□□ -2.37
Cldn9Q9Z0S7 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Cldn9Q9Z0S7 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.23□□□□□ -2.37
Cldn9Q9Z0S7 Gm25634-201ENSMUST00000082667 105 ntBASIC0.23□□□□□ -2.37
Cldn9Q9Z0S7 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.23□□□□□ -2.37
Cldn9Q9Z0S7 Gm22757-201ENSMUST00000102279 96 ntBASIC0.22□□□□□ -2.37
Cldn9Q9Z0S7 Scarna8-201ENSMUST00000158333 131 ntBASIC0.22□□□□□ -2.37
Cldn9Q9Z0S7 Gm44977-201ENSMUST00000205283 420 ntBASIC0.22□□□□□ -2.37
Cldn9Q9Z0S7 Gm22051-201ENSMUST00000117002 127 ntBASIC0.21□□□□□ -2.38
Cldn9Q9Z0S7 Gm24509-201ENSMUST00000157086 101 ntBASIC0.21□□□□□ -2.38
Cldn9Q9Z0S7 Gm25358-201ENSMUST00000157189 101 ntBASIC0.21□□□□□ -2.38
Cldn9Q9Z0S7 Mir669k-201ENSMUST00000177742 127 ntBASIC0.21□□□□□ -2.38
Cldn9Q9Z0S7 Gm25673-201ENSMUST00000179957 127 ntBASIC0.21□□□□□ -2.38
Cldn9Q9Z0S7 Gm24415-201ENSMUST00000180218 107 ntBASIC0.21□□□□□ -2.38
Cldn9Q9Z0S7 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.21□□□□□ -2.38
Cldn9Q9Z0S7 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 138.6 ms