Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm12309-201ENSMUST00000119889 182 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Gm24750-201ENSMUST00000157843 104 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Gm25771-201ENSMUST00000158565 144 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Gm25364-201ENSMUST00000158851 107 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Gm25838-201ENSMUST00000158920 120 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Traj60-201ENSMUST00000167781 54 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Mir6240-201ENSMUST00000184281 117 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Mir7052-201ENSMUST00000184821 65 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Gm5002-201ENSMUST00000207145 223 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Gm24624-201ENSMUST00000082617 164 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Mir654-201ENSMUST00000104787 84 ntBASIC1.39□□□□□ -2.19
Trim54Q9ERP3 Gm13345-201ENSMUST00000121928 228 ntBASIC1.39□□□□□ -2.19
Trim54Q9ERP3 Gm23636-201ENSMUST00000175070 95 ntBASIC1.39□□□□□ -2.19
Trim54Q9ERP3 Gm22862-201ENSMUST00000178593 121 ntBASIC1.39□□□□□ -2.19
Trim54Q9ERP3 Mir8119-201ENSMUST00000183371 129 ntBASIC1.39□□□□□ -2.19
Trim54Q9ERP3 Mir7039-201ENSMUST00000183852 85 ntBASIC1.39□□□□□ -2.19
Trim54Q9ERP3 Gm25401-201ENSMUST00000082975 106 ntBASIC1.39□□□□□ -2.19
Trim54Q9ERP3 Gm24588-201ENSMUST00000116696 83 ntBASIC1.38□□□□□ -2.19
Trim54Q9ERP3 Gm23329-201ENSMUST00000157415 108 ntBASIC1.38□□□□□ -2.19
Trim54Q9ERP3 Gm26090-201ENSMUST00000157897 128 ntBASIC1.38□□□□□ -2.19
Trim54Q9ERP3 Gm25069-201ENSMUST00000175238 86 ntBASIC1.38□□□□□ -2.19
Trim54Q9ERP3 Mir211-201ENSMUST00000083651 106 ntBASIC1.38□□□□□ -2.19
Trim54Q9ERP3 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.37□□□□□ -2.19
Trim54Q9ERP3 Gm23907-201ENSMUST00000104595 189 ntBASIC1.37□□□□□ -2.19
Trim54Q9ERP3 Gm22200-201ENSMUST00000158614 67 ntBASIC1.37□□□□□ -2.19
Trim54Q9ERP3 Gm24880-201ENSMUST00000158776 85 ntBASIC1.37□□□□□ -2.19
Trim54Q9ERP3 Gm22914-201ENSMUST00000175195 77 ntBASIC1.37□□□□□ -2.19
Trim54Q9ERP3 Gm23567-201ENSMUST00000178005 107 ntBASIC1.37□□□□□ -2.19
Trim54Q9ERP3 Gm44922-201ENSMUST00000206690 90 ntBASIC1.37□□□□□ -2.19
Trim54Q9ERP3 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.37□□□□□ -2.19
Trim54Q9ERP3 Mir451a-201ENSMUST00000093557 72 ntBASIC1.37□□□□□ -2.19
Trim54Q9ERP3 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.37□□□□□ -2.19
Trim54Q9ERP3 Snord72-201ENSMUST00000104549 81 ntBASIC1.36□□□□□ -2.19
Trim54Q9ERP3 Gm22559-201ENSMUST00000157329 134 ntBASIC1.36□□□□□ -2.19
Trim54Q9ERP3 Gm22606-201ENSMUST00000158290 103 ntBASIC1.36□□□□□ -2.19
Trim54Q9ERP3 Gm26029-201ENSMUST00000158659 132 ntBASIC1.36□□□□□ -2.19
Trim54Q9ERP3 Gm25495-201ENSMUST00000104431 131 ntBASIC1.35□□□□□ -2.19
Trim54Q9ERP3 Gm23328-201ENSMUST00000157418 132 ntBASIC1.35□□□□□ -2.19
Trim54Q9ERP3 Gm22946-201ENSMUST00000158558 82 ntBASIC1.35□□□□□ -2.19
Trim54Q9ERP3 Gm16546-201ENSMUST00000159442 355 ntBASIC1.35□□□□□ -2.19
Trim54Q9ERP3 Gm16399-201ENSMUST00000181423 219 ntBASIC1.35□□□□□ -2.19
Trim54Q9ERP3 Gm44358-201ENSMUST00000196301 98 ntBASIC1.35□□□□□ -2.19
Trim54Q9ERP3 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.35□□□□□ -2.19
Trim54Q9ERP3 Gm11857-201ENSMUST00000119817 324 ntBASIC1.34□□□□□ -2.19
Trim54Q9ERP3 Gm22337-201ENSMUST00000157721 132 ntBASIC1.34□□□□□ -2.19
Trim54Q9ERP3 Gm22612-201ENSMUST00000158293 101 ntBASIC1.34□□□□□ -2.19
Trim54Q9ERP3 Gm23209-201ENSMUST00000158667 110 ntBASIC1.34□□□□□ -2.19
Trim54Q9ERP3 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.34□□□□□ -2.19
Trim54Q9ERP3 Gm21940-201ENSMUST00000204940 2278 ntBASIC1.34□□□□□ -2.2
Trim54Q9ERP3 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Trim54Q9ERP3 Gm14568-201ENSMUST00000119321 294 ntBASIC1.33□□□□□ -2.2
Trim54Q9ERP3 Gm22482-201ENSMUST00000122563 359 ntBASIC1.33□□□□□ -2.2
Trim54Q9ERP3 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.33□□□□□ -2.2
Trim54Q9ERP3 Gm26097-201ENSMUST00000179642 93 ntBASIC1.33□□□□□ -2.2
Trim54Q9ERP3 Gm24252-201ENSMUST00000083700 132 ntBASIC1.33□□□□□ -2.2
Trim54Q9ERP3 Mir488-201ENSMUST00000093595 109 ntBASIC1.33□□□□□ -2.2
Trim54Q9ERP3 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Gm22999-201ENSMUST00000157082 88 ntBASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Gm16539-201ENSMUST00000160086 327 ntBASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Mir466b-1-201ENSMUST00000177988 82 ntBASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Gm27420-201ENSMUST00000183823 79 ntBASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Gm28256-201ENSMUST00000188953 139 ntBASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Gm28559-201ENSMUST00000190532 139 ntBASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Gm44483-201ENSMUST00000197203 97 ntBASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.32□□□□□ -2.2
Trim54Q9ERP3 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Gm26224-201ENSMUST00000082506 80 ntBASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Gm26326-201ENSMUST00000083070 129 ntBASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Gm22673-201ENSMUST00000104415 131 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Gm26301-201ENSMUST00000104813 95 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Gm23080-201ENSMUST00000157846 103 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Snora24-201ENSMUST00000174989 130 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Gm27711-201ENSMUST00000183802 118 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Mir6481-201ENSMUST00000184617 110 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Gm42988-201ENSMUST00000198116 225 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Gm44490-201ENSMUST00000198566 127 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Gm25588-201ENSMUST00000082501 140 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Mir196b-201ENSMUST00000083509 85 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Gm26403-201ENSMUST00000158500 105 ntBASIC1.3□□□□□ -2.2
Trim54Q9ERP3 Gm23339-201ENSMUST00000158962 139 ntBASIC1.3□□□□□ -2.2
Trim54Q9ERP3 Gm22348-201ENSMUST00000178674 79 ntBASIC1.3□□□□□ -2.2
Trim54Q9ERP3 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.3□□□□□ -2.2
Trim54Q9ERP3 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.3□□□□□ -2.2
Trim54Q9ERP3 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.3□□□□□ -2.2
Trim54Q9ERP3 Gm23772-201ENSMUST00000104433 102 ntBASIC1.29□□□□□ -2.2
Trim54Q9ERP3 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Trim54Q9ERP3 Mir1298-201ENSMUST00000116681 98 ntBASIC1.29□□□□□ -2.2
Trim54Q9ERP3 Gm25599-201ENSMUST00000157816 103 ntBASIC1.29□□□□□ -2.2
Trim54Q9ERP3 Gm25768-201ENSMUST00000158570 98 ntBASIC1.29□□□□□ -2.2
Trim54Q9ERP3 Gm25976-201ENSMUST00000158695 130 ntBASIC1.29□□□□□ -2.2
Trim54Q9ERP3 Gm27934-201ENSMUST00000158795 63 ntBASIC1.29□□□□□ -2.2
Trim54Q9ERP3 Gm27365-201ENSMUST00000184041 177 ntBASIC1.29□□□□□ -2.2
Trim54Q9ERP3 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.29□□□□□ -2.2
Trim54Q9ERP3 Gm22003-201ENSMUST00000101885 107 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Gm24865-201ENSMUST00000103246 96 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Gm25011-201ENSMUST00000158398 126 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Gm25769-201ENSMUST00000158569 127 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Gm25044-201ENSMUST00000158603 104 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Gm22663-201ENSMUST00000158721 102 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 130.7 ms