Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.56□□□□□ -2.32
Lrif1Q8CDD9 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Lrif1Q8CDD9 Gm25416-201ENSMUST00000104221 107 ntBASIC0.55□□□□□ -2.32
Lrif1Q8CDD9 Gm25828-201ENSMUST00000157087 95 ntBASIC0.55□□□□□ -2.32
Lrif1Q8CDD9 Gm24015-201ENSMUST00000157725 232 ntBASIC0.55□□□□□ -2.32
Lrif1Q8CDD9 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.55□□□□□ -2.32
Lrif1Q8CDD9 Gm22801-201ENSMUST00000175624 84 ntBASIC0.55□□□□□ -2.32
Lrif1Q8CDD9 Gm28435-201ENSMUST00000185496 108 ntBASIC0.55□□□□□ -2.32
Lrif1Q8CDD9 Gm24527-201ENSMUST00000082920 107 ntBASIC0.55□□□□□ -2.32
Lrif1Q8CDD9 Mir500-201ENSMUST00000093600 92 ntBASIC0.55□□□□□ -2.32
Lrif1Q8CDD9 Gm14883-201ENSMUST00000120179 157 ntBASIC0.54□□□□□ -2.32
Lrif1Q8CDD9 Gm25267-201ENSMUST00000158522 63 ntBASIC0.54□□□□□ -2.32
Lrif1Q8CDD9 Gm16307-201ENSMUST00000161269 210 ntBASIC0.54□□□□□ -2.32
Lrif1Q8CDD9 Gm43432-201ENSMUST00000196352 121 ntBASIC0.54□□□□□ -2.32
Lrif1Q8CDD9 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.54□□□□□ -2.32
Lrif1Q8CDD9 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.54□□□□□ -2.32
Lrif1Q8CDD9 Gm12837-201ENSMUST00000120131 373 ntBASIC0.53□□□□□ -2.32
Lrif1Q8CDD9 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
Lrif1Q8CDD9 Gm25241-201ENSMUST00000174909 84 ntBASIC0.53□□□□□ -2.32
Lrif1Q8CDD9 Gm26217-201ENSMUST00000175212 84 ntBASIC0.53□□□□□ -2.32
Lrif1Q8CDD9 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.53□□□□□ -2.32
Lrif1Q8CDD9 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.53□□□□□ -2.32
Lrif1Q8CDD9 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.53□□□□□ -2.33
Lrif1Q8CDD9 Mir547-201ENSMUST00000102051 78 ntBASIC0.52□□□□□ -2.33
Lrif1Q8CDD9 Gm23853-201ENSMUST00000158375 104 ntBASIC0.52□□□□□ -2.33
Lrif1Q8CDD9 Mir1933-201ENSMUST00000158930 88 ntBASIC0.52□□□□□ -2.33
Lrif1Q8CDD9 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.52□□□□□ -2.33
Lrif1Q8CDD9 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.52□□□□□ -2.33
Lrif1Q8CDD9 Gm26236-201ENSMUST00000175536 137 ntBASIC0.52□□□□□ -2.33
Lrif1Q8CDD9 Gm25397-201ENSMUST00000176951 92 ntBASIC0.52□□□□□ -2.33
Lrif1Q8CDD9 Gm24385-201ENSMUST00000122694 350 ntBASIC0.51□□□□□ -2.33
Lrif1Q8CDD9 Gm22887-201ENSMUST00000178586 107 ntBASIC0.51□□□□□ -2.33
Lrif1Q8CDD9 Gm27905-201ENSMUST00000184005 207 ntBASIC0.51□□□□□ -2.33
Lrif1Q8CDD9 Gm44488-201ENSMUST00000199467 119 ntBASIC0.51□□□□□ -2.33
Lrif1Q8CDD9 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.51□□□□□ -2.33
Lrif1Q8CDD9 Gm23126-201ENSMUST00000104260 134 ntBASIC0.5□□□□□ -2.33
Lrif1Q8CDD9 Gm14946-201ENSMUST00000119859 296 ntBASIC0.5□□□□□ -2.33
Lrif1Q8CDD9 Gm22522-201ENSMUST00000158271 151 ntBASIC0.5□□□□□ -2.33
Lrif1Q8CDD9 Gm27672-201ENSMUST00000183751 204 ntBASIC0.5□□□□□ -2.33
Lrif1Q8CDD9 Gm37997-201ENSMUST00000193515 267 ntBASIC0.5□□□□□ -2.33
Lrif1Q8CDD9 Gm24929-201ENSMUST00000083403 139 ntBASIC0.5□□□□□ -2.33
Lrif1Q8CDD9 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.49□□□□□ -2.33
Lrif1Q8CDD9 Gm22786-201ENSMUST00000104086 122 ntBASIC0.49□□□□□ -2.33
Lrif1Q8CDD9 Gm26026-201ENSMUST00000122726 123 ntBASIC0.49□□□□□ -2.33
Lrif1Q8CDD9 Gm22999-201ENSMUST00000157082 88 ntBASIC0.49□□□□□ -2.33
Lrif1Q8CDD9 Gm24547-201ENSMUST00000158649 149 ntBASIC0.49□□□□□ -2.33
Lrif1Q8CDD9 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.49□□□□□ -2.33
Lrif1Q8CDD9 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
Lrif1Q8CDD9 Gm8219-201ENSMUST00000218309 242 ntBASIC0.49□□□□□ -2.33
Lrif1Q8CDD9 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.49□□□□□ -2.33
Lrif1Q8CDD9 Gm26123-201ENSMUST00000083363 135 ntBASIC0.49□□□□□ -2.33
Lrif1Q8CDD9 Mir30a-201ENSMUST00000083471 71 ntBASIC0.49□□□□□ -2.33
Lrif1Q8CDD9 Mir384-201ENSMUST00000083565 88 ntBASIC0.49□□□□□ -2.33
Lrif1Q8CDD9 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.49□□□□□ -2.33
Lrif1Q8CDD9 Gm26293-201ENSMUST00000104170 84 ntBASIC0.48□□□□□ -2.33
Lrif1Q8CDD9 Mir881-201ENSMUST00000104844 78 ntBASIC0.48□□□□□ -2.33
Lrif1Q8CDD9 Gm13577-201ENSMUST00000121365 205 ntBASIC0.48□□□□□ -2.33
Lrif1Q8CDD9 Gm26285-201ENSMUST00000177923 107 ntBASIC0.48□□□□□ -2.33
Lrif1Q8CDD9 Gm27585-201ENSMUST00000183717 199 ntBASIC0.48□□□□□ -2.33
Lrif1Q8CDD9 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.48□□□□□ -2.33
Lrif1Q8CDD9 Gm19790-201ENSMUST00000214414 251 ntBASIC0.48□□□□□ -2.33
Lrif1Q8CDD9 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.48□□□□□ -2.33
Lrif1Q8CDD9 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.48□□□□□ -2.33
Lrif1Q8CDD9 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.48□□□□□ -2.33
Lrif1Q8CDD9 Gm23622-201ENSMUST00000082460 107 ntBASIC0.48□□□□□ -2.33
Lrif1Q8CDD9 Gm25138-201ENSMUST00000083248 136 ntBASIC0.48□□□□□ -2.33
Lrif1Q8CDD9 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.48□□□□□ -2.33
Lrif1Q8CDD9 Gm25496-201ENSMUST00000104430 120 ntBASIC0.47□□□□□ -2.33
Lrif1Q8CDD9 Gm25509-201ENSMUST00000116985 106 ntBASIC0.47□□□□□ -2.33
Lrif1Q8CDD9 Gm12815-201ENSMUST00000121737 135 ntBASIC0.47□□□□□ -2.33
Lrif1Q8CDD9 Gm25720-201ENSMUST00000157503 105 ntBASIC0.47□□□□□ -2.33
Lrif1Q8CDD9 Gm25882-201ENSMUST00000157784 85 ntBASIC0.47□□□□□ -2.33
Lrif1Q8CDD9 Gm26484-201ENSMUST00000158018 106 ntBASIC0.47□□□□□ -2.33
Lrif1Q8CDD9 Mir6389-201ENSMUST00000183661 102 ntBASIC0.47□□□□□ -2.33
Lrif1Q8CDD9 Gm6003-201ENSMUST00000187903 463 ntBASIC0.47□□□□□ -2.33
Lrif1Q8CDD9 Gm24258-201ENSMUST00000083739 133 ntBASIC0.47□□□□□ -2.33
Lrif1Q8CDD9 Gm22469-201ENSMUST00000104118 133 ntBASIC0.46□□□□□ -2.34
Lrif1Q8CDD9 Gm6272-201ENSMUST00000121256 171 ntBASIC0.46□□□□□ -2.34
Lrif1Q8CDD9 Gm13345-201ENSMUST00000121928 228 ntBASIC0.46□□□□□ -2.34
Lrif1Q8CDD9 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.46□□□□□ -2.34
Lrif1Q8CDD9 Gm27289-201ENSMUST00000183341 82 ntBASIC0.46□□□□□ -2.34
Lrif1Q8CDD9 Mir6377-201ENSMUST00000183760 114 ntBASIC0.46□□□□□ -2.34
Lrif1Q8CDD9 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.46□□□□□ -2.34
Lrif1Q8CDD9 Mir146-201ENSMUST00000083667 65 ntBASIC0.46□□□□□ -2.34
Lrif1Q8CDD9 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
Lrif1Q8CDD9 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Lrif1Q8CDD9 Gm24867-201ENSMUST00000104161 107 ntBASIC0.45□□□□□ -2.34
Lrif1Q8CDD9 Gm23321-201ENSMUST00000104465 126 ntBASIC0.45□□□□□ -2.34
Lrif1Q8CDD9 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.45□□□□□ -2.34
Lrif1Q8CDD9 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.45□□□□□ -2.34
Lrif1Q8CDD9 Gm38364-201ENSMUST00000191814 179 ntBASIC0.45□□□□□ -2.34
Lrif1Q8CDD9 Gm44462-201ENSMUST00000199696 129 ntBASIC0.45□□□□□ -2.34
Lrif1Q8CDD9 Gm25814-201ENSMUST00000082754 107 ntBASIC0.45□□□□□ -2.34
Lrif1Q8CDD9 Gm22759-201ENSMUST00000102276 96 ntBASIC0.44□□□□□ -2.34
Lrif1Q8CDD9 Gm25110-201ENSMUST00000116684 121 ntBASIC0.44□□□□□ -2.34
Lrif1Q8CDD9 Gm25775-201ENSMUST00000116716 121 ntBASIC0.44□□□□□ -2.34
Lrif1Q8CDD9 Gm24795-201ENSMUST00000116737 121 ntBASIC0.44□□□□□ -2.34
Lrif1Q8CDD9 Gm25171-201ENSMUST00000116926 121 ntBASIC0.44□□□□□ -2.34
Lrif1Q8CDD9 Gm23841-201ENSMUST00000116951 114 ntBASIC0.44□□□□□ -2.34
Lrif1Q8CDD9 Gm14567-201ENSMUST00000117155 174 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 162.7 ms