Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.57□□□□□ -2
Prpf40bQ80W14 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.57□□□□□ -2
Prpf40bQ80W14 Gm16976-205ENSMUST00000227324 226 ntBASIC2.57□□□□□ -2
Prpf40bQ80W14 Gm26168-201ENSMUST00000083787 112 ntBASIC2.57□□□□□ -2
Prpf40bQ80W14 Snora2b-201ENSMUST00000084005 137 ntBASIC2.57□□□□□ -2
Prpf40bQ80W14 Mir490-201ENSMUST00000093567 84 ntBASIC2.57□□□□□ -2
Prpf40bQ80W14 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Prpf40bQ80W14 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Prpf40bQ80W14 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.56□□□□□ -2
Prpf40bQ80W14 Mir669n-201ENSMUST00000158636 54 ntBASIC2.56□□□□□ -2
Prpf40bQ80W14 Gm20477-201ENSMUST00000174028 280 ntBASIC2.56□□□□□ -2
Prpf40bQ80W14 Gm23714-201ENSMUST00000179259 105 ntBASIC2.56□□□□□ -2
Prpf40bQ80W14 Mir7232-201ENSMUST00000197929 74 ntBASIC2.56□□□□□ -2
Prpf40bQ80W14 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.56□□□□□ -2
Prpf40bQ80W14 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.56□□□□□ -2
Prpf40bQ80W14 Gm23656-201ENSMUST00000122626 112 ntBASIC2.55□□□□□ -2
Prpf40bQ80W14 Gm23181-201ENSMUST00000158685 110 ntBASIC2.55□□□□□ -2
Prpf40bQ80W14 Gm44555-201ENSMUST00000209008 148 ntBASIC2.55□□□□□ -2
Prpf40bQ80W14 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Prpf40bQ80W14 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Prpf40bQ80W14 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.55□□□□□ -2
Prpf40bQ80W14 Gm25796-201ENSMUST00000082645 163 ntBASIC2.55□□□□□ -2
Prpf40bQ80W14 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Prpf40bQ80W14 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.55□□□□□ -2
Prpf40bQ80W14 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Prpf40bQ80W14 Mir547-201ENSMUST00000102051 78 ntBASIC2.54□□□□□ -2
Prpf40bQ80W14 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.54□□□□□ -2
Prpf40bQ80W14 Gm25091-201ENSMUST00000103997 71 ntBASIC2.54□□□□□ -2
Prpf40bQ80W14 Gm27446-201ENSMUST00000183963 89 ntBASIC2.54□□□□□ -2
Prpf40bQ80W14 Gm24661-201ENSMUST00000083205 104 ntBASIC2.54□□□□□ -2
Prpf40bQ80W14 Gm22743-201ENSMUST00000083445 133 ntBASIC2.54□□□□□ -2
Prpf40bQ80W14 Gm22723-201ENSMUST00000083820 129 ntBASIC2.54□□□□□ -2
Prpf40bQ80W14 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.53□□□□□ -2
Prpf40bQ80W14 Gm23109-201ENSMUST00000116867 126 ntBASIC2.53□□□□□ -2
Prpf40bQ80W14 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.53□□□□□ -2
Prpf40bQ80W14 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.53□□□□□ -2
Prpf40bQ80W14 Gm24394-201ENSMUST00000158141 123 ntBASIC2.53□□□□□ -2
Prpf40bQ80W14 Gm24769-201ENSMUST00000158506 129 ntBASIC2.53□□□□□ -2
Prpf40bQ80W14 Gm26004-201ENSMUST00000158804 116 ntBASIC2.53□□□□□ -2
Prpf40bQ80W14 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.53□□□□□ -2
Prpf40bQ80W14 Gm22055-201ENSMUST00000083388 107 ntBASIC2.53□□□□□ -2
Prpf40bQ80W14 Mir300-201ENSMUST00000083485 79 ntBASIC2.53□□□□□ -2
Prpf40bQ80W14 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.53□□□□□ -2
Prpf40bQ80W14 Gm22149-201ENSMUST00000104442 136 ntBASIC2.52□□□□□ -2.01
Prpf40bQ80W14 Gm12013-201ENSMUST00000121971 155 ntBASIC2.52□□□□□ -2.01
Prpf40bQ80W14 Gm22451-201ENSMUST00000122803 151 ntBASIC2.52□□□□□ -2.01
Prpf40bQ80W14 Gm24250-201ENSMUST00000157320 135 ntBASIC2.52□□□□□ -2.01
Prpf40bQ80W14 Gm22083-201ENSMUST00000157586 102 ntBASIC2.52□□□□□ -2.01
Prpf40bQ80W14 Gm22888-201ENSMUST00000158640 77 ntBASIC2.52□□□□□ -2.01
Prpf40bQ80W14 Mir3086-201ENSMUST00000175072 87 ntBASIC2.52□□□□□ -2.01
Prpf40bQ80W14 Gm23770-201ENSMUST00000178009 108 ntBASIC2.52□□□□□ -2.01
Prpf40bQ80W14 Gm22832-201ENSMUST00000178022 108 ntBASIC2.52□□□□□ -2.01
Prpf40bQ80W14 Gm23863-201ENSMUST00000178265 108 ntBASIC2.52□□□□□ -2.01
Prpf40bQ80W14 Gm24828-201ENSMUST00000178507 108 ntBASIC2.52□□□□□ -2.01
Prpf40bQ80W14 Gm23052-201ENSMUST00000178633 108 ntBASIC2.52□□□□□ -2.01
Prpf40bQ80W14 Gm25729-201ENSMUST00000179050 108 ntBASIC2.52□□□□□ -2.01
Prpf40bQ80W14 Gm25359-201ENSMUST00000179315 108 ntBASIC2.52□□□□□ -2.01
Prpf40bQ80W14 Gm26073-201ENSMUST00000179906 127 ntBASIC2.52□□□□□ -2.01
Prpf40bQ80W14 Gm22624-201ENSMUST00000179913 108 ntBASIC2.52□□□□□ -2.01
Prpf40bQ80W14 Mir6928-201ENSMUST00000185166 70 ntBASIC2.52□□□□□ -2.01
Prpf40bQ80W14 Gm37330-201ENSMUST00000192606 153 ntBASIC2.52□□□□□ -2.01
Prpf40bQ80W14 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.51□□□□□ -2.01
Prpf40bQ80W14 Gm22556-201ENSMUST00000157803 100 ntBASIC2.51□□□□□ -2.01
Prpf40bQ80W14 Mir3094-201ENSMUST00000175121 64 ntBASIC2.51□□□□□ -2.01
Prpf40bQ80W14 Gm24656-201ENSMUST00000177548 132 ntBASIC2.51□□□□□ -2.01
Prpf40bQ80W14 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.51□□□□□ -2.01
Prpf40bQ80W14 Snora3-201ENSMUST00000083082 132 ntBASIC2.51□□□□□ -2.01
Prpf40bQ80W14 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.51□□□□□ -2.01
Prpf40bQ80W14 Gm22545-201ENSMUST00000104350 132 ntBASIC2.5□□□□□ -2.01
Prpf40bQ80W14 Gm24379-201ENSMUST00000122695 86 ntBASIC2.5□□□□□ -2.01
Prpf40bQ80W14 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Prpf40bQ80W14 Gm12309-201ENSMUST00000119889 182 ntBASIC2.49□□□□□ -2.01
Prpf40bQ80W14 Gm22490-201ENSMUST00000157188 119 ntBASIC2.49□□□□□ -2.01
Prpf40bQ80W14 Gm26345-201ENSMUST00000157534 120 ntBASIC2.49□□□□□ -2.01
Prpf40bQ80W14 Gm16561-201ENSMUST00000163001 192 ntBASIC2.49□□□□□ -2.01
Prpf40bQ80W14 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.49□□□□□ -2.01
Prpf40bQ80W14 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.49□□□□□ -2.01
Prpf40bQ80W14 Snord43-201ENSMUST00000199549 108 ntBASIC2.49□□□□□ -2.01
Prpf40bQ80W14 Snora20-201ENSMUST00000082703 128 ntBASIC2.49□□□□□ -2.01
Prpf40bQ80W14 Gm25855-201ENSMUST00000082787 72 ntBASIC2.49□□□□□ -2.01
Prpf40bQ80W14 Gm22866-201ENSMUST00000083947 177 ntBASIC2.49□□□□□ -2.01
Prpf40bQ80W14 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.49□□□□□ -2.01
Prpf40bQ80W14 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Prpf40bQ80W14 Mir880-201ENSMUST00000104809 78 ntBASIC2.48□□□□□ -2.01
Prpf40bQ80W14 Gm22999-201ENSMUST00000157082 88 ntBASIC2.48□□□□□ -2.01
Prpf40bQ80W14 Gm27979-201ENSMUST00000185126 56 ntBASIC2.48□□□□□ -2.01
Prpf40bQ80W14 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.48□□□□□ -2.01
Prpf40bQ80W14 Gm22196-201ENSMUST00000116865 109 ntBASIC2.47□□□□□ -2.01
Prpf40bQ80W14 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.47□□□□□ -2.01
Prpf40bQ80W14 Gm16510-201ENSMUST00000153501 249 ntBASIC2.47□□□□□ -2.01
Prpf40bQ80W14 Gm25678-201ENSMUST00000174984 73 ntBASIC2.47□□□□□ -2.01
Prpf40bQ80W14 Gm24638-201ENSMUST00000179807 132 ntBASIC2.47□□□□□ -2.01
Prpf40bQ80W14 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.47□□□□□ -2.01
Prpf40bQ80W14 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Prpf40bQ80W14 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Prpf40bQ80W14 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
Prpf40bQ80W14 Gm22004-201ENSMUST00000101884 107 ntBASIC2.46□□□□□ -2.02
Prpf40bQ80W14 Gm8034-201ENSMUST00000178853 132 ntBASIC2.46□□□□□ -2.02
Prpf40bQ80W14 Mir6377-201ENSMUST00000183760 114 ntBASIC2.46□□□□□ -2.02
Prpf40bQ80W14 Gm43324-201ENSMUST00000197482 289 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 131.2 ms