Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.53□□□□□ -2
Trim56Q80VI1 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.53□□□□□ -2
Trim56Q80VI1 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trim56Q80VI1 Gm25094-201ENSMUST00000103992 131 ntBASIC2.52□□□□□ -2.01
Trim56Q80VI1 Gm12941-201ENSMUST00000117934 220 ntBASIC2.52□□□□□ -2.01
Trim56Q80VI1 Gm16510-201ENSMUST00000153501 249 ntBASIC2.52□□□□□ -2.01
Trim56Q80VI1 Gm24650-201ENSMUST00000157105 103 ntBASIC2.52□□□□□ -2.01
Trim56Q80VI1 Gm22227-201ENSMUST00000157356 259 ntBASIC2.52□□□□□ -2.01
Trim56Q80VI1 Gm24237-201ENSMUST00000157790 132 ntBASIC2.52□□□□□ -2.01
Trim56Q80VI1 Gm8034-201ENSMUST00000178853 132 ntBASIC2.52□□□□□ -2.01
Trim56Q80VI1 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim56Q80VI1 Gm45429-201ENSMUST00000209527 172 ntBASIC2.52□□□□□ -2.01
Trim56Q80VI1 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.52□□□□□ -2.01
Trim56Q80VI1 Mir7-1-201ENSMUST00000083500 108 ntBASIC2.52□□□□□ -2.01
Trim56Q80VI1 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Trim56Q80VI1 Mir880-201ENSMUST00000104809 78 ntBASIC2.51□□□□□ -2.01
Trim56Q80VI1 Gm11792-201ENSMUST00000120640 168 ntBASIC2.51□□□□□ -2.01
Trim56Q80VI1 Gm15536-201ENSMUST00000121411 114 ntBASIC2.51□□□□□ -2.01
Trim56Q80VI1 Gm23656-201ENSMUST00000122626 112 ntBASIC2.51□□□□□ -2.01
Trim56Q80VI1 Gm26345-201ENSMUST00000157534 120 ntBASIC2.51□□□□□ -2.01
Trim56Q80VI1 Gm22083-201ENSMUST00000157586 102 ntBASIC2.51□□□□□ -2.01
Trim56Q80VI1 Gm22845-201ENSMUST00000157712 104 ntBASIC2.51□□□□□ -2.01
Trim56Q80VI1 Gm26004-201ENSMUST00000158804 116 ntBASIC2.51□□□□□ -2.01
Trim56Q80VI1 Gm20409-201ENSMUST00000173457 130 ntBASIC2.51□□□□□ -2.01
Trim56Q80VI1 Mir3086-201ENSMUST00000175072 87 ntBASIC2.51□□□□□ -2.01
Trim56Q80VI1 AC126939.1-201ENSMUST00000224943 226 ntBASIC2.51□□□□□ -2.01
Trim56Q80VI1 AC160962.3-201ENSMUST00000225914 112 ntBASIC2.51□□□□□ -2.01
Trim56Q80VI1 Gm25788-201ENSMUST00000082721 131 ntBASIC2.51□□□□□ -2.01
Trim56Q80VI1 Gm24656-201ENSMUST00000177548 132 ntBASIC2.5□□□□□ -2.01
Trim56Q80VI1 Gm3724-201ENSMUST00000197957 349 ntBASIC2.5□□□□□ -2.01
Trim56Q80VI1 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.5□□□□□ -2.01
Trim56Q80VI1 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.49□□□□□ -2.01
Trim56Q80VI1 Gm24913-201ENSMUST00000157286 107 ntBASIC2.49□□□□□ -2.01
Trim56Q80VI1 Gm25393-201ENSMUST00000157336 285 ntBASIC2.49□□□□□ -2.01
Trim56Q80VI1 Gm22212-201ENSMUST00000158096 106 ntBASIC2.49□□□□□ -2.01
Trim56Q80VI1 Gm24900-201ENSMUST00000158128 134 ntBASIC2.49□□□□□ -2.01
Trim56Q80VI1 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.49□□□□□ -2.01
Trim56Q80VI1 Mir423-201ENSMUST00000083584 109 ntBASIC2.49□□□□□ -2.01
Trim56Q80VI1 Snora69-201ENSMUST00000083708 131 ntBASIC2.49□□□□□ -2.01
Trim56Q80VI1 Gm26076-201ENSMUST00000104065 105 ntBASIC2.48□□□□□ -2.01
Trim56Q80VI1 Gm22332-201ENSMUST00000158072 126 ntBASIC2.48□□□□□ -2.01
Trim56Q80VI1 Gm20477-201ENSMUST00000174028 280 ntBASIC2.48□□□□□ -2.01
Trim56Q80VI1 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.48□□□□□ -2.01
Trim56Q80VI1 Gm24572-201ENSMUST00000175505 88 ntBASIC2.48□□□□□ -2.01
Trim56Q80VI1 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.48□□□□□ -2.01
Trim56Q80VI1 Gm25820-202ENSMUST00000197479 128 ntBASIC2.48□□□□□ -2.01
Trim56Q80VI1 Mir7232-201ENSMUST00000197929 74 ntBASIC2.48□□□□□ -2.01
Trim56Q80VI1 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.48□□□□□ -2.01
Trim56Q80VI1 Gm22545-201ENSMUST00000104350 132 ntBASIC2.47□□□□□ -2.01
Trim56Q80VI1 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.47□□□□□ -2.01
Trim56Q80VI1 Gm27443-201ENSMUST00000184660 98 ntBASIC2.47□□□□□ -2.01
Trim56Q80VI1 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.47□□□□□ -2.01
Trim56Q80VI1 Snora20-201ENSMUST00000082703 128 ntBASIC2.47□□□□□ -2.01
Trim56Q80VI1 Gm25855-201ENSMUST00000082787 72 ntBASIC2.47□□□□□ -2.01
Trim56Q80VI1 Mir300-201ENSMUST00000083485 79 ntBASIC2.47□□□□□ -2.01
Trim56Q80VI1 Mir411-201ENSMUST00000083543 82 ntBASIC2.47□□□□□ -2.01
Trim56Q80VI1 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Trim56Q80VI1 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.01
Trim56Q80VI1 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Trim56Q80VI1 Gm23244-201ENSMUST00000083375 92 ntBASIC2.46□□□□□ -2.02
Trim56Q80VI1 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Trim56Q80VI1 Gm26154-201ENSMUST00000102339 96 ntBASIC2.45□□□□□ -2.02
Trim56Q80VI1 Gm23996-201ENSMUST00000158062 131 ntBASIC2.45□□□□□ -2.02
Trim56Q80VI1 AC124687.1-201ENSMUST00000221868 189 ntBASIC2.45□□□□□ -2.02
Trim56Q80VI1 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.44□□□□□ -2.02
Trim56Q80VI1 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Trim56Q80VI1 Gm23011-201ENSMUST00000104148 132 ntBASIC2.44□□□□□ -2.02
Trim56Q80VI1 Snord43-201ENSMUST00000199549 108 ntBASIC2.44□□□□□ -2.02
Trim56Q80VI1 Gm25796-201ENSMUST00000082645 163 ntBASIC2.44□□□□□ -2.02
Trim56Q80VI1 Mir222-201ENSMUST00000083537 79 ntBASIC2.44□□□□□ -2.02
Trim56Q80VI1 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trim56Q80VI1 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trim56Q80VI1 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.43□□□□□ -2.02
Trim56Q80VI1 Gm26421-201ENSMUST00000104279 132 ntBASIC2.43□□□□□ -2.02
Trim56Q80VI1 Gm22031-201ENSMUST00000116945 126 ntBASIC2.43□□□□□ -2.02
Trim56Q80VI1 Gm11856-201ENSMUST00000118712 276 ntBASIC2.43□□□□□ -2.02
Trim56Q80VI1 Gm14588-201ENSMUST00000119895 172 ntBASIC2.43□□□□□ -2.02
Trim56Q80VI1 Gm23083-201ENSMUST00000157851 116 ntBASIC2.43□□□□□ -2.02
Trim56Q80VI1 Gm26090-201ENSMUST00000157897 128 ntBASIC2.43□□□□□ -2.02
Trim56Q80VI1 Gm22429-201ENSMUST00000158553 130 ntBASIC2.43□□□□□ -2.02
Trim56Q80VI1 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.43□□□□□ -2.02
Trim56Q80VI1 Mir6901-201ENSMUST00000185062 62 ntBASIC2.43□□□□□ -2.02
Trim56Q80VI1 Gm28270-201ENSMUST00000188550 109 ntBASIC2.43□□□□□ -2.02
Trim56Q80VI1 Gm28328-201ENSMUST00000188869 109 ntBASIC2.43□□□□□ -2.02
Trim56Q80VI1 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trim56Q80VI1 Snora3-201ENSMUST00000083082 132 ntBASIC2.43□□□□□ -2.02
Trim56Q80VI1 Mir322-201ENSMUST00000083484 95 ntBASIC2.43□□□□□ -2.02
Trim56Q80VI1 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trim56Q80VI1 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.43□□□□□ -2.02
Trim56Q80VI1 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Trim56Q80VI1 Gm24468-201ENSMUST00000104489 104 ntBASIC2.42□□□□□ -2.02
Trim56Q80VI1 Gm23342-201ENSMUST00000158958 115 ntBASIC2.42□□□□□ -2.02
Trim56Q80VI1 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.42□□□□□ -2.02
Trim56Q80VI1 Gm22638-201ENSMUST00000179674 107 ntBASIC2.42□□□□□ -2.02
Trim56Q80VI1 Gm27979-201ENSMUST00000185126 56 ntBASIC2.42□□□□□ -2.02
Trim56Q80VI1 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trim56Q80VI1 Mir669d-201ENSMUST00000104644 121 ntBASIC2.41□□□□□ -2.02
Trim56Q80VI1 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.41□□□□□ -2.02
Trim56Q80VI1 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trim56Q80VI1 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 156.3 ms