Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm24661-201ENSMUST00000083205 104 ntBASIC2.69□□□□□ -1.98
Limch1Q3UH68 Gm22743-201ENSMUST00000083445 133 ntBASIC2.69□□□□□ -1.98
Limch1Q3UH68 Gm24049-201ENSMUST00000102409 100 ntBASIC2.68□□□□□ -1.98
Limch1Q3UH68 Gm24937-201ENSMUST00000122597 134 ntBASIC2.68□□□□□ -1.98
Limch1Q3UH68 Gm24238-201ENSMUST00000157792 98 ntBASIC2.68□□□□□ -1.98
Limch1Q3UH68 Gm20409-201ENSMUST00000173457 130 ntBASIC2.68□□□□□ -1.98
Limch1Q3UH68 Gm22264-201ENSMUST00000178200 107 ntBASIC2.68□□□□□ -1.98
Limch1Q3UH68 Gm26073-201ENSMUST00000179906 127 ntBASIC2.68□□□□□ -1.98
Limch1Q3UH68 Mir6388-201ENSMUST00000184417 75 ntBASIC2.68□□□□□ -1.98
Limch1Q3UH68 Mir7226-201ENSMUST00000184953 60 ntBASIC2.68□□□□□ -1.98
Limch1Q3UH68 Gm24313-201ENSMUST00000082561 133 ntBASIC2.68□□□□□ -1.98
Limch1Q3UH68 Mir490-201ENSMUST00000093567 84 ntBASIC2.68□□□□□ -1.98
Limch1Q3UH68 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Limch1Q3UH68 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Limch1Q3UH68 Gm22999-201ENSMUST00000157082 88 ntBASIC2.67□□□□□ -1.98
Limch1Q3UH68 Gm25996-201ENSMUST00000175393 117 ntBASIC2.67□□□□□ -1.98
Limch1Q3UH68 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Limch1Q3UH68 Gm45268-201ENSMUST00000210046 370 ntBASIC2.67□□□□□ -1.98
Limch1Q3UH68 AC124687.1-201ENSMUST00000221868 189 ntBASIC2.67□□□□□ -1.98
Limch1Q3UH68 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.66□□□□□ -1.98
Limch1Q3UH68 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Limch1Q3UH68 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.66□□□□□ -1.98
Limch1Q3UH68 Gm22099-201ENSMUST00000157925 123 ntBASIC2.66□□□□□ -1.98
Limch1Q3UH68 Gm22332-201ENSMUST00000158072 126 ntBASIC2.66□□□□□ -1.98
Limch1Q3UH68 Gm22888-201ENSMUST00000158640 77 ntBASIC2.66□□□□□ -1.98
Limch1Q3UH68 Gm23548-201ENSMUST00000158963 106 ntBASIC2.66□□□□□ -1.98
Limch1Q3UH68 Gm23507-201ENSMUST00000083078 107 ntBASIC2.66□□□□□ -1.98
Limch1Q3UH68 Gm23038-201ENSMUST00000083873 104 ntBASIC2.66□□□□□ -1.98
Limch1Q3UH68 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.65□□□□□ -1.98
Limch1Q3UH68 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Limch1Q3UH68 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.65□□□□□ -1.99
Limch1Q3UH68 Gm23951-201ENSMUST00000104029 132 ntBASIC2.65□□□□□ -1.99
Limch1Q3UH68 Gm23011-201ENSMUST00000104148 132 ntBASIC2.65□□□□□ -1.99
Limch1Q3UH68 Gm7258-201ENSMUST00000179317 300 ntBASIC2.65□□□□□ -1.99
Limch1Q3UH68 Gm22638-201ENSMUST00000179674 107 ntBASIC2.65□□□□□ -1.99
Limch1Q3UH68 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.65□□□□□ -1.99
Limch1Q3UH68 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.65□□□□□ -1.99
Limch1Q3UH68 Gm22950-201ENSMUST00000082776 107 ntBASIC2.65□□□□□ -1.99
Limch1Q3UH68 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Limch1Q3UH68 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Limch1Q3UH68 Mir497-201ENSMUST00000200557 84 ntBASIC2.64□□□□□ -1.99
Limch1Q3UH68 Mir411-201ENSMUST00000083543 82 ntBASIC2.64□□□□□ -1.99
Limch1Q3UH68 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.63□□□□□ -1.99
Limch1Q3UH68 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC2.63□□□□□ -1.99
Limch1Q3UH68 Mir322-201ENSMUST00000083484 95 ntBASIC2.63□□□□□ -1.99
Limch1Q3UH68 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
Limch1Q3UH68 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Limch1Q3UH68 Gm25094-201ENSMUST00000103992 131 ntBASIC2.62□□□□□ -1.99
Limch1Q3UH68 Gm22083-201ENSMUST00000157586 102 ntBASIC2.62□□□□□ -1.99
Limch1Q3UH68 Gm24769-201ENSMUST00000158506 129 ntBASIC2.62□□□□□ -1.99
Limch1Q3UH68 Gm26004-201ENSMUST00000158804 116 ntBASIC2.62□□□□□ -1.99
Limch1Q3UH68 Gm24656-201ENSMUST00000177548 132 ntBASIC2.62□□□□□ -1.99
Limch1Q3UH68 Mir7009-201ENSMUST00000184519 64 ntBASIC2.62□□□□□ -1.99
Limch1Q3UH68 Mir7232-201ENSMUST00000197929 74 ntBASIC2.62□□□□□ -1.99
Limch1Q3UH68 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.62□□□□□ -1.99
Limch1Q3UH68 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Limch1Q3UH68 Snora20-201ENSMUST00000082703 128 ntBASIC2.62□□□□□ -1.99
Limch1Q3UH68 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
Limch1Q3UH68 Mir880-201ENSMUST00000104809 78 ntBASIC2.61□□□□□ -1.99
Limch1Q3UH68 Gm12941-201ENSMUST00000117934 220 ntBASIC2.61□□□□□ -1.99
Limch1Q3UH68 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.61□□□□□ -1.99
Limch1Q3UH68 Gm23083-201ENSMUST00000157851 116 ntBASIC2.61□□□□□ -1.99
Limch1Q3UH68 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Limch1Q3UH68 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.61□□□□□ -1.99
Limch1Q3UH68 Gm25855-201ENSMUST00000082787 72 ntBASIC2.61□□□□□ -1.99
Limch1Q3UH68 Mir423-201ENSMUST00000083584 109 ntBASIC2.61□□□□□ -1.99
Limch1Q3UH68 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.61□□□□□ -1.99
Limch1Q3UH68 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Limch1Q3UH68 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Limch1Q3UH68 Gm22545-201ENSMUST00000104350 132 ntBASIC2.6□□□□□ -1.99
Limch1Q3UH68 Gm23048-201ENSMUST00000157237 129 ntBASIC2.6□□□□□ -1.99
Limch1Q3UH68 Gm7214-201ENSMUST00000222428 272 ntBASIC2.6□□□□□ -1.99
Limch1Q3UH68 Snora41-201ENSMUST00000082668 132 ntBASIC2.6□□□□□ -1.99
Limch1Q3UH68 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.6□□□□□ -1.99
Limch1Q3UH68 Gm25090-201ENSMUST00000104000 132 ntBASIC2.59□□□□□ -1.99
Limch1Q3UH68 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.59□□□□□ -1.99
Limch1Q3UH68 Gm16265-201ENSMUST00000134558 108 ntBASIC2.59□□□□□ -1.99
Limch1Q3UH68 Gm16510-201ENSMUST00000153501 249 ntBASIC2.59□□□□□ -1.99
Limch1Q3UH68 Mir6406-201ENSMUST00000183592 120 ntBASIC2.59□□□□□ -1.99
Limch1Q3UH68 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.59□□□□□ -1.99
Limch1Q3UH68 Gm26379-202ENSMUST00000200225 132 ntBASIC2.59□□□□□ -1.99
Limch1Q3UH68 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.59□□□□□ -1.99
Limch1Q3UH68 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.59□□□□□ -2
Limch1Q3UH68 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.59□□□□□ -2
Limch1Q3UH68 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC2.59□□□□□ -2
Limch1Q3UH68 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.58□□□□□ -2
Limch1Q3UH68 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.58□□□□□ -2
Limch1Q3UH68 Gm22772-201ENSMUST00000104451 121 ntBASIC2.58□□□□□ -2
Limch1Q3UH68 Gm23656-201ENSMUST00000122626 112 ntBASIC2.58□□□□□ -2
Limch1Q3UH68 Mir6997-201ENSMUST00000184313 71 ntBASIC2.58□□□□□ -2
Limch1Q3UH68 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Limch1Q3UH68 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Limch1Q3UH68 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Limch1Q3UH68 Snord78-201ENSMUST00000104032 66 ntBASIC2.57□□□□□ -2
Limch1Q3UH68 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.57□□□□□ -2
Limch1Q3UH68 Gm26090-201ENSMUST00000157897 128 ntBASIC2.57□□□□□ -2
Limch1Q3UH68 Gm24900-201ENSMUST00000158128 134 ntBASIC2.57□□□□□ -2
Limch1Q3UH68 Mir3083-201ENSMUST00000175377 64 ntBASIC2.57□□□□□ -2
Limch1Q3UH68 Gm44308-201ENSMUST00000197080 99 ntBASIC2.57□□□□□ -2
Limch1Q3UH68 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 138.2 ms