Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Mir672-201ENSMUST00000102331 100 ntBASIC-0.55□□□□□ -2.5
Tpm1P58771 Gm6952-201ENSMUST00000118629 159 ntBASIC-0.55□□□□□ -2.5
Tpm1P58771 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.55□□□□□ -2.5
Tpm1P58771 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.55□□□□□ -2.5
Tpm1P58771 Gm24635-201ENSMUST00000122712 128 ntBASIC-0.56□□□□□ -2.5
Tpm1P58771 Gm22815-201ENSMUST00000157451 62 ntBASIC-0.56□□□□□ -2.5
Tpm1P58771 Gm22767-201ENSMUST00000158365 165 ntBASIC-0.56□□□□□ -2.5
Tpm1P58771 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.56□□□□□ -2.5
Tpm1P58771 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.56□□□□□ -2.5
Tpm1P58771 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.56□□□□□ -2.5
Tpm1P58771 Gm23412-201ENSMUST00000083017 107 ntBASIC-0.56□□□□□ -2.5
Tpm1P58771 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.56□□□□□ -2.5
Tpm1P58771 Gm43885-201ENSMUST00000204928 2542 ntBASIC-0.56□□□□□ -2.5
Tpm1P58771 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.57□□□□□ -2.5
Tpm1P58771 Gm25982-201ENSMUST00000157920 101 ntBASIC-0.57□□□□□ -2.5
Tpm1P58771 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.57□□□□□ -2.5
Tpm1P58771 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.57□□□□□ -2.5
Tpm1P58771 AC159896.1-201ENSMUST00000215264 215 ntBASIC-0.57□□□□□ -2.5
Tpm1P58771 AL935138.1-201ENSMUST00000215309 196 ntBASIC-0.57□□□□□ -2.5
Tpm1P58771 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.57□□□□□ -2.5
Tpm1P58771 Gm25142-201ENSMUST00000082698 107 ntBASIC-0.57□□□□□ -2.5
Tpm1P58771 Snora75-201ENSMUST00000082903 133 ntBASIC-0.57□□□□□ -2.5
Tpm1P58771 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.58□□□□□ -2.5
Tpm1P58771 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.58□□□□□ -2.5
Tpm1P58771 Snord60-201ENSMUST00000082834 78 ntBASIC-0.58□□□□□ -2.5
Tpm1P58771 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-0.58□□□□□ -2.5
Tpm1P58771 Gm25828-201ENSMUST00000157087 95 ntBASIC-0.59□□□□□ -2.5
Tpm1P58771 Gm26482-201ENSMUST00000158015 62 ntBASIC-0.59□□□□□ -2.5
Tpm1P58771 Gm23022-201ENSMUST00000158768 180 ntBASIC-0.59□□□□□ -2.5
Tpm1P58771 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-0.59□□□□□ -2.5
Tpm1P58771 CT025603.4-201ENSMUST00000225777 413 ntBASIC-0.59□□□□□ -2.5
Tpm1P58771 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.59□□□□□ -2.5
Tpm1P58771 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.59□□□□□ -2.5
Tpm1P58771 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.6□□□□□ -2.51
Tpm1P58771 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.6□□□□□ -2.51
Tpm1P58771 Gm44149-201ENSMUST00000204256 226 ntBASIC-0.6□□□□□ -2.51
Tpm1P58771 Rny3-201ENSMUST00000083011 102 ntBASIC-0.6□□□□□ -2.51
Tpm1P58771 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.61□□□□□ -2.51
Tpm1P58771 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.61□□□□□ -2.51
Tpm1P58771 Gm25323-201ENSMUST00000122555 103 ntBASIC-0.61□□□□□ -2.51
Tpm1P58771 Gm25970-201ENSMUST00000157165 86 ntBASIC-0.61□□□□□ -2.51
Tpm1P58771 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.61□□□□□ -2.51
Tpm1P58771 Mir669k-201ENSMUST00000177742 127 ntBASIC-0.61□□□□□ -2.51
Tpm1P58771 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.61□□□□□ -2.51
Tpm1P58771 Gm25673-201ENSMUST00000179957 127 ntBASIC-0.61□□□□□ -2.51
Tpm1P58771 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.61□□□□□ -2.51
Tpm1P58771 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.61□□□□□ -2.51
Tpm1P58771 Gm7240-201ENSMUST00000220769 664 ntBASIC-0.61□□□□□ -2.51
Tpm1P58771 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.62□□□□□ -2.51
Tpm1P58771 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC-0.62□□□□□ -2.51
Tpm1P58771 Gm27997-201ENSMUST00000184942 69 ntBASIC-0.62□□□□□ -2.51
Tpm1P58771 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.62□□□□□ -2.51
Tpm1P58771 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.63□□□□□ -2.51
Tpm1P58771 Gm22555-201ENSMUST00000157801 62 ntBASIC-0.63□□□□□ -2.51
Tpm1P58771 Gm44419-201ENSMUST00000203338 229 ntBASIC-0.63□□□□□ -2.51
Tpm1P58771 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-0.63□□□□□ -2.51
Tpm1P58771 Gm24555-201ENSMUST00000104548 124 ntBASIC-0.64□□□□□ -2.51
Tpm1P58771 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC-0.64□□□□□ -2.51
Tpm1P58771 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.64□□□□□ -2.51
Tpm1P58771 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.64□□□□□ -2.51
Tpm1P58771 Gm22085-201ENSMUST00000158344 110 ntBASIC-0.64□□□□□ -2.51
Tpm1P58771 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.64□□□□□ -2.51
Tpm1P58771 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC-0.64□□□□□ -2.51
Tpm1P58771 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.64□□□□□ -2.51
Tpm1P58771 Snord42a-201ENSMUST00000082606 65 ntBASIC-0.64□□□□□ -2.51
Tpm1P58771 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.64□□□□□ -2.51
Tpm1P58771 Gm23845-201ENSMUST00000083834 152 ntBASIC-0.64□□□□□ -2.51
Tpm1P58771 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-0.65□□□□□ -2.51
Tpm1P58771 Gm22984-201ENSMUST00000122751 122 ntBASIC-0.65□□□□□ -2.51
Tpm1P58771 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.65□□□□□ -2.51
Tpm1P58771 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
Tpm1P58771 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.66□□□□□ -2.52
Tpm1P58771 Gm26479-201ENSMUST00000122620 106 ntBASIC-0.66□□□□□ -2.52
Tpm1P58771 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.66□□□□□ -2.52
Tpm1P58771 Gm25771-201ENSMUST00000158565 144 ntBASIC-0.66□□□□□ -2.52
Tpm1P58771 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.66□□□□□ -2.52
Tpm1P58771 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.66□□□□□ -2.52
Tpm1P58771 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.66□□□□□ -2.52
Tpm1P58771 Ighv12-2-201ENSMUST00000191949 362 ntBASIC-0.67□□□□□ -2.52
Tpm1P58771 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.68□□□□□ -2.52
Tpm1P58771 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-0.68□□□□□ -2.52
Tpm1P58771 Gm24192-201ENSMUST00000157978 145 ntBASIC-0.68□□□□□ -2.52
Tpm1P58771 Gm24501-201ENSMUST00000158452 62 ntBASIC-0.68□□□□□ -2.52
Tpm1P58771 Gm23059-201ENSMUST00000158978 107 ntBASIC-0.68□□□□□ -2.52
Tpm1P58771 Gm22118-201ENSMUST00000175593 171 ntBASIC-0.68□□□□□ -2.52
Tpm1P58771 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.68□□□□□ -2.52
Tpm1P58771 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.68□□□□□ -2.52
Tpm1P58771 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.68□□□□□ -2.52
Tpm1P58771 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.69□□□□□ -2.52
Tpm1P58771 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.69□□□□□ -2.52
Tpm1P58771 Mir191-201ENSMUST00000196210 74 ntBASIC-0.69□□□□□ -2.52
Tpm1P58771 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.69□□□□□ -2.52
Tpm1P58771 Mir214-201ENSMUST00000083582 110 ntBASIC-0.69□□□□□ -2.52
Tpm1P58771 Gm23655-201ENSMUST00000122627 105 ntBASIC-0.7□□□□□ -2.52
Tpm1P58771 Gm25424-201ENSMUST00000157612 58 ntBASIC-0.7□□□□□ -2.52
Tpm1P58771 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.7□□□□□ -2.52
Tpm1P58771 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.7□□□□□ -2.52
Tpm1P58771 Gm26379-202ENSMUST00000200225 132 ntBASIC-0.7□□□□□ -2.52
Tpm1P58771 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.7□□□□□ -2.52
Tpm1P58771 Gm22686-201ENSMUST00000082847 100 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 135.5 ms