Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC2.7□□□□□ -1.98
Col18a1P39061 Gm44666-201ENSMUST00000208544 391 ntBASIC2.7□□□□□ -1.98
Col18a1P39061 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.7□□□□□ -1.98
Col18a1P39061 Gm26326-201ENSMUST00000083070 129 ntBASIC2.7□□□□□ -1.98
Col18a1P39061 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
Col18a1P39061 Gm25771-201ENSMUST00000158565 144 ntBASIC2.69□□□□□ -1.98
Col18a1P39061 Mir3094-201ENSMUST00000175121 64 ntBASIC2.69□□□□□ -1.98
Col18a1P39061 Gm24811-201ENSMUST00000175313 100 ntBASIC2.69□□□□□ -1.98
Col18a1P39061 Gm23267-201ENSMUST00000178490 132 ntBASIC2.69□□□□□ -1.98
Col18a1P39061 Mir6350-201ENSMUST00000183639 105 ntBASIC2.69□□□□□ -1.98
Col18a1P39061 Mir7678-201ENSMUST00000185076 71 ntBASIC2.69□□□□□ -1.98
Col18a1P39061 AC158631.1-201ENSMUST00000219202 138 ntBASIC2.69□□□□□ -1.98
Col18a1P39061 Gm25854-201ENSMUST00000082792 72 ntBASIC2.69□□□□□ -1.98
Col18a1P39061 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col18a1P39061 Gm24375-201ENSMUST00000104397 132 ntBASIC2.69□□□□□ -1.98
Col18a1P39061 Gm22673-201ENSMUST00000104415 131 ntBASIC2.69□□□□□ -1.98
Col18a1P39061 Gm24396-201ENSMUST00000116905 93 ntBASIC2.69□□□□□ -1.98
Col18a1P39061 Gm24896-201ENSMUST00000122741 135 ntBASIC2.69□□□□□ -1.98
Col18a1P39061 Gm24064-201ENSMUST00000157486 106 ntBASIC2.69□□□□□ -1.98
Col18a1P39061 Gm26415-201ENSMUST00000157673 292 ntBASIC2.69□□□□□ -1.98
Col18a1P39061 Gm22539-201ENSMUST00000158167 117 ntBASIC2.69□□□□□ -1.98
Col18a1P39061 Gm20108-201ENSMUST00000219977 153 ntBASIC2.69□□□□□ -1.98
Col18a1P39061 Gm11966-201ENSMUST00000119907 87 ntBASIC2.68□□□□□ -1.98
Col18a1P39061 Gm22107-201ENSMUST00000122548 100 ntBASIC2.68□□□□□ -1.98
Col18a1P39061 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.68□□□□□ -1.98
Col18a1P39061 Gm22304-201ENSMUST00000082688 129 ntBASIC2.68□□□□□ -1.98
Col18a1P39061 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC2.68□□□□□ -1.98
Col18a1P39061 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Col18a1P39061 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Col18a1P39061 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Col18a1P39061 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.67□□□□□ -1.98
Col18a1P39061 Gm22554-201ENSMUST00000157798 147 ntBASIC2.67□□□□□ -1.98
Col18a1P39061 Snora26-201ENSMUST00000175614 121 ntBASIC2.67□□□□□ -1.98
Col18a1P39061 Gm27894-201ENSMUST00000184177 92 ntBASIC2.67□□□□□ -1.98
Col18a1P39061 Gm23727-201ENSMUST00000083352 164 ntBASIC2.67□□□□□ -1.98
Col18a1P39061 Gm25337-201ENSMUST00000083723 104 ntBASIC2.67□□□□□ -1.98
Col18a1P39061 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Col18a1P39061 Gm22761-201ENSMUST00000102278 96 ntBASIC2.66□□□□□ -1.98
Col18a1P39061 Mir301b-201ENSMUST00000102333 97 ntBASIC2.66□□□□□ -1.98
Col18a1P39061 Gm26420-201ENSMUST00000104273 103 ntBASIC2.66□□□□□ -1.98
Col18a1P39061 Gm13885-201ENSMUST00000117569 187 ntBASIC2.66□□□□□ -1.98
Col18a1P39061 Gm25740-201ENSMUST00000180247 107 ntBASIC2.66□□□□□ -1.98
Col18a1P39061 Gm6801-201ENSMUST00000190697 339 ntBASIC2.66□□□□□ -1.98
Col18a1P39061 Gm25696-201ENSMUST00000082900 105 ntBASIC2.66□□□□□ -1.98
Col18a1P39061 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Col18a1P39061 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Col18a1P39061 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
Col18a1P39061 Gm26082-201ENSMUST00000104070 127 ntBASIC2.66□□□□□ -1.98
Col18a1P39061 Gm24171-201ENSMUST00000104126 131 ntBASIC2.66□□□□□ -1.98
Col18a1P39061 Gm22677-201ENSMUST00000116977 108 ntBASIC2.66□□□□□ -1.98
Col18a1P39061 Gm24480-201ENSMUST00000157442 103 ntBASIC2.66□□□□□ -1.98
Col18a1P39061 Gm24846-201ENSMUST00000158033 108 ntBASIC2.66□□□□□ -1.98
Col18a1P39061 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Col18a1P39061 Mir1291-201ENSMUST00000199842 117 ntBASIC2.66□□□□□ -1.98
Col18a1P39061 Gm22245-201ENSMUST00000082479 103 ntBASIC2.66□□□□□ -1.98
Col18a1P39061 Snora34-201ENSMUST00000083402 138 ntBASIC2.66□□□□□ -1.98
Col18a1P39061 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.66□□□□□ -1.98
Col18a1P39061 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
Col18a1P39061 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Col18a1P39061 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.98
Col18a1P39061 Gm23256-201ENSMUST00000102235 110 ntBASIC2.65□□□□□ -1.99
Col18a1P39061 Gm11792-201ENSMUST00000120640 168 ntBASIC2.65□□□□□ -1.99
Col18a1P39061 Gm28650-201ENSMUST00000188413 411 ntBASIC2.65□□□□□ -1.99
Col18a1P39061 Gm24313-201ENSMUST00000082561 133 ntBASIC2.65□□□□□ -1.99
Col18a1P39061 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
Col18a1P39061 Gm22957-201ENSMUST00000122511 123 ntBASIC2.64□□□□□ -1.99
Col18a1P39061 Gm26280-201ENSMUST00000157096 101 ntBASIC2.64□□□□□ -1.99
Col18a1P39061 Gm25888-201ENSMUST00000157778 302 ntBASIC2.64□□□□□ -1.99
Col18a1P39061 Gm27639-201ENSMUST00000184937 85 ntBASIC2.64□□□□□ -1.99
Col18a1P39061 Gm45268-201ENSMUST00000210046 370 ntBASIC2.64□□□□□ -1.99
Col18a1P39061 Gm23376-201ENSMUST00000082938 160 ntBASIC2.64□□□□□ -1.99
Col18a1P39061 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Col18a1P39061 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
Col18a1P39061 AC158598.2-201ENSMUST00000213397 3832 ntBASIC2.64□□□□□ -1.99
Col18a1P39061 Gm22560-201ENSMUST00000157332 120 ntBASIC2.64□□□□□ -1.99
Col18a1P39061 Gm25644-201ENSMUST00000083209 107 ntBASIC2.64□□□□□ -1.99
Col18a1P39061 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Col18a1P39061 Gm25274-201ENSMUST00000104296 135 ntBASIC2.63□□□□□ -1.99
Col18a1P39061 Gm27975-201ENSMUST00000184400 101 ntBASIC2.63□□□□□ -1.99
Col18a1P39061 Mir6376-201ENSMUST00000185149 131 ntBASIC2.63□□□□□ -1.99
Col18a1P39061 Gm37290-201ENSMUST00000195775 339 ntBASIC2.63□□□□□ -1.99
Col18a1P39061 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Col18a1P39061 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Col18a1P39061 Gm23324-201ENSMUST00000157421 131 ntBASIC2.62□□□□□ -1.99
Col18a1P39061 Gm26485-201ENSMUST00000158019 64 ntBASIC2.62□□□□□ -1.99
Col18a1P39061 Mir148b-201ENSMUST00000083626 97 ntBASIC2.62□□□□□ -1.99
Col18a1P39061 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Col18a1P39061 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Col18a1P39061 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Col18a1P39061 Gm20613-201ENSMUST00000175828 345 ntBASIC2.61□□□□□ -1.99
Col18a1P39061 Trbv25-201ENSMUST00000194700 273 ntBASIC2.61□□□□□ -1.99
Col18a1P39061 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.61□□□□□ -1.99
Col18a1P39061 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC2.61□□□□□ -1.99
Col18a1P39061 Gm24096-201ENSMUST00000103905 110 ntBASIC2.61□□□□□ -1.99
Col18a1P39061 Gm22535-201ENSMUST00000158174 119 ntBASIC2.61□□□□□ -1.99
Col18a1P39061 Mir3968-201ENSMUST00000175355 100 ntBASIC2.61□□□□□ -1.99
Col18a1P39061 Mir7016-201ENSMUST00000184308 72 ntBASIC2.61□□□□□ -1.99
Col18a1P39061 Mir3069-201ENSMUST00000198802 65 ntBASIC2.61□□□□□ -1.99
Col18a1P39061 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.61□□□□□ -1.99
Col18a1P39061 Gm23570-201ENSMUST00000083029 104 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 220.9 ms