Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm25828-201ENSMUST00000157087 95 ntBASIC0.37□□□□□ -2.35
P20040 Gm23763-201ENSMUST00000158345 60 ntBASIC0.37□□□□□ -2.35
P20040 Gm24547-201ENSMUST00000158649 149 ntBASIC0.37□□□□□ -2.35
P20040 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.37□□□□□ -2.35
P20040 Mir6377-201ENSMUST00000183760 114 ntBASIC0.37□□□□□ -2.35
P20040 Mir6951-201ENSMUST00000183910 75 ntBASIC0.37□□□□□ -2.35
P20040 Gm37997-201ENSMUST00000193515 267 ntBASIC0.37□□□□□ -2.35
P20040 Gm43432-201ENSMUST00000196352 121 ntBASIC0.37□□□□□ -2.35
P20040 Gm23345-201ENSMUST00000083817 150 ntBASIC0.37□□□□□ -2.35
P20040 Mir875-201ENSMUST00000104698 78 ntBASIC0.36□□□□□ -2.35
P20040 Gm24963-201ENSMUST00000157916 144 ntBASIC0.36□□□□□ -2.35
P20040 Gm25241-201ENSMUST00000174909 84 ntBASIC0.36□□□□□ -2.35
P20040 Gm26217-201ENSMUST00000175212 84 ntBASIC0.36□□□□□ -2.35
P20040 Gm22887-201ENSMUST00000178586 107 ntBASIC0.36□□□□□ -2.35
P20040 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
P20040 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
P20040 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
P20040 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.35□□□□□ -2.35
P20040 Gm25393-201ENSMUST00000157336 285 ntBASIC0.35□□□□□ -2.35
P20040 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.35□□□□□ -2.35
P20040 Gm37715-201ENSMUST00000193206 235 ntBASIC0.35□□□□□ -2.35
P20040 Snord69-201ENSMUST00000104024 80 ntBASIC0.34□□□□□ -2.36
P20040 Gm22469-201ENSMUST00000104118 133 ntBASIC0.34□□□□□ -2.36
P20040 Gm11322-201ENSMUST00000118095 435 ntBASIC0.34□□□□□ -2.36
P20040 Gm23672-201ENSMUST00000157471 107 ntBASIC0.34□□□□□ -2.36
P20040 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.34□□□□□ -2.36
P20040 Gm25814-201ENSMUST00000082754 107 ntBASIC0.34□□□□□ -2.36
P20040 Gm26326-201ENSMUST00000083070 129 ntBASIC0.34□□□□□ -2.36
P20040 Gm22759-201ENSMUST00000102276 96 ntBASIC0.33□□□□□ -2.36
P20040 Mir466f-2-201ENSMUST00000104805 94 ntBASIC0.33□□□□□ -2.36
P20040 Gm14792-201ENSMUST00000119725 258 ntBASIC0.33□□□□□ -2.36
P20040 Gm23466-201ENSMUST00000157133 106 ntBASIC0.33□□□□□ -2.36
P20040 Gm44462-201ENSMUST00000199696 129 ntBASIC0.33□□□□□ -2.36
P20040 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.33□□□□□ -2.36
P20040 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
P20040 Gm26123-201ENSMUST00000083363 135 ntBASIC0.33□□□□□ -2.36
P20040 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.33□□□□□ -2.36
P20040 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
P20040 Gm26293-201ENSMUST00000104170 84 ntBASIC0.32□□□□□ -2.36
P20040 Gm23126-201ENSMUST00000104260 134 ntBASIC0.32□□□□□ -2.36
P20040 Gm15289-201ENSMUST00000117793 244 ntBASIC0.32□□□□□ -2.36
P20040 Gm25318-201ENSMUST00000122554 314 ntBASIC0.32□□□□□ -2.36
P20040 Gm23581-201ENSMUST00000158531 63 ntBASIC0.32□□□□□ -2.36
P20040 Gm24549-201ENSMUST00000158647 139 ntBASIC0.32□□□□□ -2.36
P20040 Gm25935-201ENSMUST00000178746 107 ntBASIC0.32□□□□□ -2.36
P20040 Gm44373-201ENSMUST00000196112 169 ntBASIC0.32□□□□□ -2.36
P20040 Gm44828-201ENSMUST00000203745 106 ntBASIC0.32□□□□□ -2.36
P20040 Gm26303-201ENSMUST00000116845 119 ntBASIC0.31□□□□□ -2.36
P20040 Gm24509-201ENSMUST00000157086 101 ntBASIC0.31□□□□□ -2.36
P20040 Gm25358-201ENSMUST00000157189 101 ntBASIC0.31□□□□□ -2.36
P20040 Gm16546-201ENSMUST00000159442 355 ntBASIC0.31□□□□□ -2.36
P20040 Gm22466-201ENSMUST00000175278 69 ntBASIC0.31□□□□□ -2.36
P20040 Gm43944-201ENSMUST00000205220 120 ntBASIC0.31□□□□□ -2.36
P20040 AL603630.1-201ENSMUST00000214781 147 ntBASIC0.31□□□□□ -2.36
P20040 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.3□□□□□ -2.36
P20040 Gm23579-201ENSMUST00000158528 103 ntBASIC0.3□□□□□ -2.36
P20040 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.3□□□□□ -2.36
P20040 Mir6336-201ENSMUST00000183581 130 ntBASIC0.3□□□□□ -2.36
P20040 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.3□□□□□ -2.36
P20040 Gm23451-201ENSMUST00000083328 122 ntBASIC0.3□□□□□ -2.36
P20040 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
P20040 Gm26076-201ENSMUST00000104065 105 ntBASIC0.29□□□□□ -2.36
P20040 Gm25496-201ENSMUST00000104430 120 ntBASIC0.29□□□□□ -2.36
P20040 Mir669i-201ENSMUST00000117007 127 ntBASIC0.29□□□□□ -2.36
P20040 Gm11388-201ENSMUST00000120908 159 ntBASIC0.29□□□□□ -2.36
P20040 Gm24594-201ENSMUST00000122502 99 ntBASIC0.29□□□□□ -2.36
P20040 Gm25494-201ENSMUST00000158143 100 ntBASIC0.29□□□□□ -2.36
P20040 Gm22983-201ENSMUST00000158308 104 ntBASIC0.29□□□□□ -2.36
P20040 Gm25300-201ENSMUST00000175284 84 ntBASIC0.29□□□□□ -2.36
P20040 Gm26116-201ENSMUST00000175600 77 ntBASIC0.29□□□□□ -2.36
P20040 Mir669a-7-201ENSMUST00000180364 87 ntBASIC0.29□□□□□ -2.36
P20040 Gm27672-201ENSMUST00000183751 204 ntBASIC0.29□□□□□ -2.36
P20040 Mir669a-6-201ENSMUST00000196127 87 ntBASIC0.29□□□□□ -2.36
P20040 Mir669a-12-201ENSMUST00000197274 87 ntBASIC0.29□□□□□ -2.36
P20040 Mir669a-5-201ENSMUST00000197439 87 ntBASIC0.29□□□□□ -2.36
P20040 Mir669a-10-201ENSMUST00000197745 87 ntBASIC0.29□□□□□ -2.36
P20040 Mir669a-11-201ENSMUST00000197952 87 ntBASIC0.29□□□□□ -2.36
P20040 Mir219b-201ENSMUST00000198317 65 ntBASIC0.29□□□□□ -2.36
P20040 Mir669a-4-201ENSMUST00000198665 87 ntBASIC0.29□□□□□ -2.36
P20040 Mir669a-9-201ENSMUST00000200087 87 ntBASIC0.29□□□□□ -2.36
P20040 Mir669a-8-201ENSMUST00000200268 87 ntBASIC0.29□□□□□ -2.36
P20040 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.29□□□□□ -2.36
P20040 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.29□□□□□ -2.36
P20040 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.29□□□□□ -2.36
P20040 Gm12837-201ENSMUST00000120131 373 ntBASIC0.28□□□□□ -2.36
P20040 Gm13339-201ENSMUST00000120651 510 ntBASIC0.28□□□□□ -2.36
P20040 Gm22999-201ENSMUST00000157082 88 ntBASIC0.28□□□□□ -2.36
P20040 Gm22706-201ENSMUST00000157907 112 ntBASIC0.28□□□□□ -2.36
P20040 Gm24500-201ENSMUST00000158447 124 ntBASIC0.28□□□□□ -2.36
P20040 Gm45541-201ENSMUST00000210443 54 ntBASIC0.28□□□□□ -2.36
P20040 Gm22358-201ENSMUST00000082877 122 ntBASIC0.28□□□□□ -2.36
P20040 Gm25188-201ENSMUST00000083913 122 ntBASIC0.28□□□□□ -2.36
P20040 Gm25848-201ENSMUST00000116790 144 ntBASIC0.27□□□□□ -2.37
P20040 Gm23989-201ENSMUST00000117030 66 ntBASIC0.27□□□□□ -2.37
P20040 Gm26152-201ENSMUST00000157427 101 ntBASIC0.27□□□□□ -2.37
P20040 Gm24476-201ENSMUST00000157437 131 ntBASIC0.27□□□□□ -2.37
P20040 Gm25771-201ENSMUST00000158565 144 ntBASIC0.27□□□□□ -2.37
P20040 Gm23969-201ENSMUST00000083324 74 ntBASIC0.27□□□□□ -2.37
P20040 Mir532-201ENSMUST00000093630 96 ntBASIC0.27□□□□□ -2.37
P20040 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.27□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 223.7 ms