Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hoxd4P10628 Gm26077-201ENSMUST00000104064 123 ntBASIC2.12□□□□□ -2.07
Hoxd4P10628 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.12□□□□□ -2.07
Hoxd4P10628 Mir1187-201ENSMUST00000116936 122 ntBASIC2.12□□□□□ -2.07
Hoxd4P10628 Gm14588-201ENSMUST00000119895 172 ntBASIC2.12□□□□□ -2.07
Hoxd4P10628 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.12□□□□□ -2.07
Hoxd4P10628 n-R5s39-201ENSMUST00000122613 108 ntBASIC2.12□□□□□ -2.07
Hoxd4P10628 Gm26150-201ENSMUST00000157426 151 ntBASIC2.12□□□□□ -2.07
Hoxd4P10628 Mir1950-201ENSMUST00000158526 74 ntBASIC2.12□□□□□ -2.07
Hoxd4P10628 Mir3076-201ENSMUST00000175415 60 ntBASIC2.12□□□□□ -2.07
Hoxd4P10628 Mir5619-201ENSMUST00000176065 61 ntBASIC2.12□□□□□ -2.07
Hoxd4P10628 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.12□□□□□ -2.07
Hoxd4P10628 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.12□□□□□ -2.07
Hoxd4P10628 Gm22622-201ENSMUST00000082870 129 ntBASIC2.12□□□□□ -2.07
Hoxd4P10628 Mir411-201ENSMUST00000083543 82 ntBASIC2.12□□□□□ -2.07
Hoxd4P10628 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Hoxd4P10628 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.12□□□□□ -2.07
Hoxd4P10628 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
Hoxd4P10628 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC2.11□□□□□ -2.07
Hoxd4P10628 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Hoxd4P10628 Gm24637-201ENSMUST00000158674 85 ntBASIC2.11□□□□□ -2.07
Hoxd4P10628 Gm23917-201ENSMUST00000175256 98 ntBASIC2.11□□□□□ -2.07
Hoxd4P10628 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Hoxd4P10628 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.11□□□□□ -2.07
Hoxd4P10628 Gm24527-201ENSMUST00000082920 107 ntBASIC2.11□□□□□ -2.07
Hoxd4P10628 Gm24536-201ENSMUST00000083144 107 ntBASIC2.11□□□□□ -2.07
Hoxd4P10628 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Hoxd4P10628 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Hoxd4P10628 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Hoxd4P10628 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.1□□□□□ -2.07
Hoxd4P10628 Mir682-201ENSMUST00000102281 96 ntBASIC2.1□□□□□ -2.07
Hoxd4P10628 Gm26339-201ENSMUST00000102368 99 ntBASIC2.1□□□□□ -2.07
Hoxd4P10628 Gm12309-201ENSMUST00000119889 182 ntBASIC2.1□□□□□ -2.07
Hoxd4P10628 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.1□□□□□ -2.07
Hoxd4P10628 Gm16355-201ENSMUST00000128606 231 ntBASIC2.1□□□□□ -2.07
Hoxd4P10628 Gm23065-201ENSMUST00000158236 130 ntBASIC2.1□□□□□ -2.07
Hoxd4P10628 Gm24922-201ENSMUST00000158511 102 ntBASIC2.1□□□□□ -2.07
Hoxd4P10628 Gm24345-201ENSMUST00000158706 124 ntBASIC2.1□□□□□ -2.07
Hoxd4P10628 Mir3075-201ENSMUST00000175340 85 ntBASIC2.1□□□□□ -2.07
Hoxd4P10628 Gm28900-201ENSMUST00000185232 156 ntBASIC2.1□□□□□ -2.07
Hoxd4P10628 Mir7217-201ENSMUST00000200304 62 ntBASIC2.1□□□□□ -2.07
Hoxd4P10628 Gm45544-201ENSMUST00000211130 88 ntBASIC2.1□□□□□ -2.07
Hoxd4P10628 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.1□□□□□ -2.07
Hoxd4P10628 Gm25697-201ENSMUST00000082902 98 ntBASIC2.1□□□□□ -2.07
Hoxd4P10628 Mir30d-201ENSMUST00000083503 82 ntBASIC2.1□□□□□ -2.07
Hoxd4P10628 Snord80-201ENSMUST00000083801 81 ntBASIC2.1□□□□□ -2.07
Hoxd4P10628 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Hoxd4P10628 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Hoxd4P10628 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Hoxd4P10628 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.09□□□□□ -2.07
Hoxd4P10628 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Hoxd4P10628 Gm25061-201ENSMUST00000104665 107 ntBASIC2.09□□□□□ -2.07
Hoxd4P10628 Mir293-201ENSMUST00000104841 80 ntBASIC2.09□□□□□ -2.07
Hoxd4P10628 Gm26247-201ENSMUST00000116702 91 ntBASIC2.09□□□□□ -2.07
Hoxd4P10628 Gm16510-201ENSMUST00000153501 249 ntBASIC2.09□□□□□ -2.07
Hoxd4P10628 Gm26105-201ENSMUST00000157253 190 ntBASIC2.09□□□□□ -2.07
Hoxd4P10628 Gm25371-201ENSMUST00000158162 101 ntBASIC2.09□□□□□ -2.07
Hoxd4P10628 Gm24801-201ENSMUST00000178503 105 ntBASIC2.09□□□□□ -2.07
Hoxd4P10628 Gm23963-201ENSMUST00000179603 77 ntBASIC2.09□□□□□ -2.07
Hoxd4P10628 Gm26073-201ENSMUST00000179906 127 ntBASIC2.09□□□□□ -2.07
Hoxd4P10628 Mir6376-201ENSMUST00000185149 131 ntBASIC2.09□□□□□ -2.07
Hoxd4P10628 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Hoxd4P10628 Gm44325-201ENSMUST00000196757 77 ntBASIC2.09□□□□□ -2.07
Hoxd4P10628 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.09□□□□□ -2.07
Hoxd4P10628 Gm26441-201ENSMUST00000082590 104 ntBASIC2.09□□□□□ -2.07
Hoxd4P10628 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Hoxd4P10628 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Hoxd4P10628 Gm23011-201ENSMUST00000104148 132 ntBASIC2.08□□□□□ -2.08
Hoxd4P10628 Gm13433-201ENSMUST00000121701 240 ntBASIC2.08□□□□□ -2.08
Hoxd4P10628 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.08□□□□□ -2.08
Hoxd4P10628 Gm22503-201ENSMUST00000158983 115 ntBASIC2.08□□□□□ -2.08
Hoxd4P10628 Gm23190-201ENSMUST00000180307 64 ntBASIC2.08□□□□□ -2.08
Hoxd4P10628 Gm28647-201ENSMUST00000188416 197 ntBASIC2.08□□□□□ -2.08
Hoxd4P10628 Snord118-201ENSMUST00000082965 135 ntBASIC2.08□□□□□ -2.08
Hoxd4P10628 Gm25199-201ENSMUST00000083095 104 ntBASIC2.08□□□□□ -2.08
Hoxd4P10628 Snord7-201ENSMUST00000083781 97 ntBASIC2.08□□□□□ -2.08
Hoxd4P10628 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.08□□□□□ -2.08
Hoxd4P10628 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.08□□□□□ -2.08
Hoxd4P10628 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.07□□□□□ -2.08
Hoxd4P10628 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Hoxd4P10628 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Hoxd4P10628 Gm23983-201ENSMUST00000157142 114 ntBASIC2.07□□□□□ -2.08
Hoxd4P10628 Gm25329-201ENSMUST00000158041 126 ntBASIC2.07□□□□□ -2.08
Hoxd4P10628 Gm22605-201ENSMUST00000158289 108 ntBASIC2.07□□□□□ -2.08
Hoxd4P10628 Gm23761-201ENSMUST00000158347 104 ntBASIC2.07□□□□□ -2.08
Hoxd4P10628 Gm45268-201ENSMUST00000210046 370 ntBASIC2.07□□□□□ -2.08
Hoxd4P10628 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.07□□□□□ -2.08
Hoxd4P10628 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.07□□□□□ -2.08
Hoxd4P10628 Gm25337-201ENSMUST00000083723 104 ntBASIC2.07□□□□□ -2.08
Hoxd4P10628 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.06□□□□□ -2.08
Hoxd4P10628 Mir802-201ENSMUST00000103258 97 ntBASIC2.06□□□□□ -2.08
Hoxd4P10628 Gm24122-201ENSMUST00000104107 132 ntBASIC2.06□□□□□ -2.08
Hoxd4P10628 Mir466k-201ENSMUST00000116774 122 ntBASIC2.06□□□□□ -2.08
Hoxd4P10628 Gm24238-201ENSMUST00000157792 98 ntBASIC2.06□□□□□ -2.08
Hoxd4P10628 Gm22731-201ENSMUST00000158086 94 ntBASIC2.06□□□□□ -2.08
Hoxd4P10628 Gm22535-201ENSMUST00000158174 119 ntBASIC2.06□□□□□ -2.08
Hoxd4P10628 Gm16584-201ENSMUST00000159267 189 ntBASIC2.06□□□□□ -2.08
Hoxd4P10628 Gm25354-201ENSMUST00000179110 105 ntBASIC2.06□□□□□ -2.08
Hoxd4P10628 Mir6237-201ENSMUST00000183808 91 ntBASIC2.06□□□□□ -2.08
Hoxd4P10628 Mir21c-201ENSMUST00000184910 78 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 137 ms