Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.33□□□□□ -2.46
Sdc4O35988 Ighv12-2-201ENSMUST00000191949 362 ntBASIC-0.33□□□□□ -2.46
Sdc4O35988 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.33□□□□□ -2.46
Sdc4O35988 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.33□□□□□ -2.46
Sdc4O35988 Gm44959-201ENSMUST00000209127 231 ntBASIC-0.33□□□□□ -2.46
Sdc4O35988 Snora75-201ENSMUST00000082903 133 ntBASIC-0.33□□□□□ -2.46
Sdc4O35988 Gm24204-201ENSMUST00000082950 107 ntBASIC-0.33□□□□□ -2.46
Sdc4O35988 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
Sdc4O35988 Gm25538-201ENSMUST00000101943 107 ntBASIC-0.34□□□□□ -2.46
Sdc4O35988 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.34□□□□□ -2.46
Sdc4O35988 Gm22097-201ENSMUST00000157929 278 ntBASIC-0.34□□□□□ -2.46
Sdc4O35988 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.34□□□□□ -2.46
Sdc4O35988 Gm27539-201ENSMUST00000184971 224 ntBASIC-0.34□□□□□ -2.46
Sdc4O35988 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.34□□□□□ -2.46
Sdc4O35988 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC-0.34□□□□□ -2.46
Sdc4O35988 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.34□□□□□ -2.46
Sdc4O35988 CT025526.1-201ENSMUST00000217327 267 ntBASIC-0.34□□□□□ -2.46
Sdc4O35988 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.34□□□□□ -2.46
Sdc4O35988 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.35□□□□□ -2.47
Sdc4O35988 Gm13801-201ENSMUST00000120750 160 ntBASIC-0.35□□□□□ -2.47
Sdc4O35988 Gm25102-201ENSMUST00000122479 112 ntBASIC-0.35□□□□□ -2.47
Sdc4O35988 Gm16356-201ENSMUST00000143300 169 ntBASIC-0.35□□□□□ -2.47
Sdc4O35988 Gm23466-201ENSMUST00000157133 106 ntBASIC-0.35□□□□□ -2.47
Sdc4O35988 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.35□□□□□ -2.47
Sdc4O35988 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.35□□□□□ -2.47
Sdc4O35988 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.35□□□□□ -2.47
Sdc4O35988 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.35□□□□□ -2.47
Sdc4O35988 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
Sdc4O35988 Gm25929-201ENSMUST00000082784 107 ntBASIC-0.35□□□□□ -2.47
Sdc4O35988 Mir214-201ENSMUST00000083582 110 ntBASIC-0.35□□□□□ -2.47
Sdc4O35988 Gm26111-201ENSMUST00000083969 106 ntBASIC-0.35□□□□□ -2.47
Sdc4O35988 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
Sdc4O35988 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
Sdc4O35988 Gm25611-201ENSMUST00000104017 133 ntBASIC-0.36□□□□□ -2.47
Sdc4O35988 Gm24171-201ENSMUST00000104126 131 ntBASIC-0.36□□□□□ -2.47
Sdc4O35988 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.36□□□□□ -2.47
Sdc4O35988 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.36□□□□□ -2.47
Sdc4O35988 Gm6952-201ENSMUST00000118629 159 ntBASIC-0.36□□□□□ -2.47
Sdc4O35988 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.36□□□□□ -2.47
Sdc4O35988 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.36□□□□□ -2.47
Sdc4O35988 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
Sdc4O35988 Gm23571-201ENSMUST00000180073 127 ntBASIC-0.36□□□□□ -2.47
Sdc4O35988 Mir191-201ENSMUST00000196210 74 ntBASIC-0.36□□□□□ -2.47
Sdc4O35988 Mir3535-201ENSMUST00000197651 147 ntBASIC-0.36□□□□□ -2.47
Sdc4O35988 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.36□□□□□ -2.47
Sdc4O35988 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.36□□□□□ -2.47
Sdc4O35988 AC131720.2-201ENSMUST00000220420 431 ntBASIC-0.36□□□□□ -2.47
Sdc4O35988 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.36□□□□□ -2.47
Sdc4O35988 Mir141-201ENSMUST00000083540 72 ntBASIC-0.36□□□□□ -2.47
Sdc4O35988 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.37□□□□□ -2.47
Sdc4O35988 Gm15069-201ENSMUST00000117792 192 ntBASIC-0.37□□□□□ -2.47
Sdc4O35988 Gm15068-201ENSMUST00000119796 192 ntBASIC-0.37□□□□□ -2.47
Sdc4O35988 Gm22553-201ENSMUST00000157797 295 ntBASIC-0.37□□□□□ -2.47
Sdc4O35988 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.37□□□□□ -2.47
Sdc4O35988 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.37□□□□□ -2.47
Sdc4O35988 Mir669k-201ENSMUST00000177742 127 ntBASIC-0.37□□□□□ -2.47
Sdc4O35988 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.37□□□□□ -2.47
Sdc4O35988 Gm25673-201ENSMUST00000179957 127 ntBASIC-0.37□□□□□ -2.47
Sdc4O35988 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.37□□□□□ -2.47
Sdc4O35988 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.37□□□□□ -2.47
Sdc4O35988 Gm28767-201ENSMUST00000188601 114 ntBASIC-0.37□□□□□ -2.47
Sdc4O35988 AC159896.1-201ENSMUST00000215264 215 ntBASIC-0.37□□□□□ -2.47
Sdc4O35988 Gm24035-201ENSMUST00000082867 107 ntBASIC-0.37□□□□□ -2.47
Sdc4O35988 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.38□□□□□ -2.47
Sdc4O35988 Gm13725-201ENSMUST00000122139 207 ntBASIC-0.38□□□□□ -2.47
Sdc4O35988 Gm24393-201ENSMUST00000158135 97 ntBASIC-0.38□□□□□ -2.47
Sdc4O35988 Gm23793-201ENSMUST00000179396 117 ntBASIC-0.38□□□□□ -2.47
Sdc4O35988 AC160984.1-201ENSMUST00000225855 3154 ntBASIC-0.39□□□□□ -2.47
Sdc4O35988 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.39□□□□□ -2.47
Sdc4O35988 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC-0.39□□□□□ -2.47
Sdc4O35988 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.39□□□□□ -2.47
Sdc4O35988 Gm23779-201ENSMUST00000157938 64 ntBASIC-0.39□□□□□ -2.47
Sdc4O35988 Gm38280-201ENSMUST00000192610 158 ntBASIC-0.39□□□□□ -2.47
Sdc4O35988 Gm43238-201ENSMUST00000196463 359 ntBASIC-0.39□□□□□ -2.47
Sdc4O35988 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.39□□□□□ -2.47
Sdc4O35988 Mir327-201ENSMUST00000199328 69 ntBASIC-0.39□□□□□ -2.47
Sdc4O35988 Gm7240-201ENSMUST00000220769 664 ntBASIC-0.39□□□□□ -2.47
Sdc4O35988 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC-0.39□□□□□ -2.47
Sdc4O35988 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.39□□□□□ -2.47
Sdc4O35988 Snord60-201ENSMUST00000082834 78 ntBASIC-0.39□□□□□ -2.47
Sdc4O35988 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-0.39□□□□□ -2.47
Sdc4O35988 CT030170.3-201ENSMUST00000221205 1815 ntBASIC-0.39□□□□□ -2.47
Sdc4O35988 Mir759-201ENSMUST00000103254 98 ntBASIC-0.4□□□□□ -2.47
Sdc4O35988 Gm24635-201ENSMUST00000122712 128 ntBASIC-0.4□□□□□ -2.47
Sdc4O35988 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.41□□□□□ -2.48
Sdc4O35988 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.41□□□□□ -2.48
Sdc4O35988 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC-0.41□□□□□ -2.48
Sdc4O35988 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.41□□□□□ -2.48
Sdc4O35988 Gm22767-201ENSMUST00000158365 165 ntBASIC-0.41□□□□□ -2.48
Sdc4O35988 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.41□□□□□ -2.48
Sdc4O35988 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.41□□□□□ -2.48
Sdc4O35988 Gm37763-201ENSMUST00000193445 120 ntBASIC-0.41□□□□□ -2.48
Sdc4O35988 Gm43976-201ENSMUST00000203637 235 ntBASIC-0.41□□□□□ -2.48
Sdc4O35988 Gm44687-201ENSMUST00000204975 235 ntBASIC-0.41□□□□□ -2.48
Sdc4O35988 Gm24453-201ENSMUST00000083346 76 ntBASIC-0.41□□□□□ -2.48
Sdc4O35988 Gm24275-201ENSMUST00000116780 146 ntBASIC-0.42□□□□□ -2.48
Sdc4O35988 Gm22984-201ENSMUST00000122751 122 ntBASIC-0.42□□□□□ -2.48
Sdc4O35988 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.42□□□□□ -2.48
Sdc4O35988 Gm42795-201ENSMUST00000198847 76 ntBASIC-0.42□□□□□ -2.48
Sdc4O35988 Gm26293-201ENSMUST00000104170 84 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 191.5 ms