Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm14671-201ENSMUST00000121790 262 ntBASIC0.43□□□□□ -2.34
Cldn9Q9Z0S7 Gm26479-201ENSMUST00000122620 106 ntBASIC0.43□□□□□ -2.34
Cldn9Q9Z0S7 Mir5624-201ENSMUST00000176635 61 ntBASIC0.43□□□□□ -2.34
Cldn9Q9Z0S7 Gm38183-201ENSMUST00000193189 205 ntBASIC0.43□□□□□ -2.34
Cldn9Q9Z0S7 Gm45544-201ENSMUST00000211130 88 ntBASIC0.43□□□□□ -2.34
Cldn9Q9Z0S7 Mir451a-201ENSMUST00000093557 72 ntBASIC0.43□□□□□ -2.34
Cldn9Q9Z0S7 Gm25538-201ENSMUST00000101943 107 ntBASIC0.42□□□□□ -2.34
Cldn9Q9Z0S7 Gm22786-201ENSMUST00000104086 122 ntBASIC0.42□□□□□ -2.34
Cldn9Q9Z0S7 Gm24793-201ENSMUST00000104289 132 ntBASIC0.42□□□□□ -2.34
Cldn9Q9Z0S7 Gm24275-201ENSMUST00000116780 146 ntBASIC0.42□□□□□ -2.34
Cldn9Q9Z0S7 Gm13801-201ENSMUST00000120750 160 ntBASIC0.42□□□□□ -2.34
Cldn9Q9Z0S7 Gm6272-201ENSMUST00000121256 171 ntBASIC0.42□□□□□ -2.34
Cldn9Q9Z0S7 Gm13725-201ENSMUST00000122139 207 ntBASIC0.42□□□□□ -2.34
Cldn9Q9Z0S7 Gm26274-201ENSMUST00000157103 321 ntBASIC0.42□□□□□ -2.34
Cldn9Q9Z0S7 Gm24015-201ENSMUST00000157725 232 ntBASIC0.42□□□□□ -2.34
Cldn9Q9Z0S7 Gm23024-201ENSMUST00000158770 292 ntBASIC0.42□□□□□ -2.34
Cldn9Q9Z0S7 AC166341.3-201ENSMUST00000221861 114 ntBASIC0.42□□□□□ -2.34
Cldn9Q9Z0S7 Gm25138-201ENSMUST00000083248 136 ntBASIC0.42□□□□□ -2.34
Cldn9Q9Z0S7 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.42□□□□□ -2.34
Cldn9Q9Z0S7 Gm25878-201ENSMUST00000104327 93 ntBASIC0.41□□□□□ -2.34
Cldn9Q9Z0S7 Gm22984-201ENSMUST00000122751 122 ntBASIC0.41□□□□□ -2.34
Cldn9Q9Z0S7 Gm23036-201ENSMUST00000157885 99 ntBASIC0.41□□□□□ -2.34
Cldn9Q9Z0S7 Mir6350-201ENSMUST00000183639 105 ntBASIC0.41□□□□□ -2.34
Cldn9Q9Z0S7 Gm37404-201ENSMUST00000195726 359 ntBASIC0.41□□□□□ -2.34
Cldn9Q9Z0S7 Gm44488-201ENSMUST00000199467 119 ntBASIC0.41□□□□□ -2.34
Cldn9Q9Z0S7 Gm44055-201ENSMUST00000204376 247 ntBASIC0.41□□□□□ -2.34
Cldn9Q9Z0S7 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.41□□□□□ -2.34
Cldn9Q9Z0S7 Snora20-201ENSMUST00000082703 128 ntBASIC0.41□□□□□ -2.34
Cldn9Q9Z0S7 Mir500-201ENSMUST00000093600 92 ntBASIC0.41□□□□□ -2.34
Cldn9Q9Z0S7 Gm23672-201ENSMUST00000157471 107 ntBASIC0.4□□□□□ -2.35
Cldn9Q9Z0S7 Gm26415-201ENSMUST00000157673 292 ntBASIC0.4□□□□□ -2.35
Cldn9Q9Z0S7 Gm22553-201ENSMUST00000157797 295 ntBASIC0.4□□□□□ -2.35
Cldn9Q9Z0S7 Gm26090-201ENSMUST00000157897 128 ntBASIC0.4□□□□□ -2.35
Cldn9Q9Z0S7 Gm22118-201ENSMUST00000175593 171 ntBASIC0.4□□□□□ -2.35
Cldn9Q9Z0S7 Gm22801-201ENSMUST00000175624 84 ntBASIC0.4□□□□□ -2.35
Cldn9Q9Z0S7 Mir6896-201ENSMUST00000198033 73 ntBASIC0.4□□□□□ -2.35
Cldn9Q9Z0S7 Gm23969-201ENSMUST00000083324 74 ntBASIC0.4□□□□□ -2.35
Cldn9Q9Z0S7 Gm23749-201ENSMUST00000104223 131 ntBASIC0.39□□□□□ -2.35
Cldn9Q9Z0S7 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Cldn9Q9Z0S7 Gm24634-201ENSMUST00000158672 107 ntBASIC0.39□□□□□ -2.35
Cldn9Q9Z0S7 Gm45005-201ENSMUST00000206640 157 ntBASIC0.39□□□□□ -2.35
Cldn9Q9Z0S7 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.39□□□□□ -2.35
Cldn9Q9Z0S7 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.38□□□□□ -2.35
Cldn9Q9Z0S7 Mir759-201ENSMUST00000103254 98 ntBASIC0.38□□□□□ -2.35
Cldn9Q9Z0S7 Gm14946-201ENSMUST00000119859 296 ntBASIC0.38□□□□□ -2.35
Cldn9Q9Z0S7 Gm15213-201ENSMUST00000122098 216 ntBASIC0.38□□□□□ -2.35
Cldn9Q9Z0S7 Gm25718-201ENSMUST00000158632 118 ntBASIC0.38□□□□□ -2.35
Cldn9Q9Z0S7 Gm16307-201ENSMUST00000161269 210 ntBASIC0.38□□□□□ -2.35
Cldn9Q9Z0S7 Mir3089-201ENSMUST00000175350 84 ntBASIC0.38□□□□□ -2.35
Cldn9Q9Z0S7 Gm28418-201ENSMUST00000186179 423 ntBASIC0.38□□□□□ -2.35
Cldn9Q9Z0S7 Gm44858-201ENSMUST00000207360 154 ntBASIC0.38□□□□□ -2.35
Cldn9Q9Z0S7 Mir224-201ENSMUST00000083608 82 ntBASIC0.38□□□□□ -2.35
Cldn9Q9Z0S7 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
Cldn9Q9Z0S7 Gm25875-201ENSMUST00000104323 107 ntBASIC0.37□□□□□ -2.35
Cldn9Q9Z0S7 Gm23853-201ENSMUST00000158375 104 ntBASIC0.37□□□□□ -2.35
Cldn9Q9Z0S7 Gm27977-201ENSMUST00000185159 111 ntBASIC0.37□□□□□ -2.35
Cldn9Q9Z0S7 Gm44989-201ENSMUST00000204749 217 ntBASIC0.37□□□□□ -2.35
Cldn9Q9Z0S7 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.37□□□□□ -2.35
Cldn9Q9Z0S7 Gm14884-201ENSMUST00000120456 196 ntBASIC0.36□□□□□ -2.35
Cldn9Q9Z0S7 Gm14919-201ENSMUST00000120839 390 ntBASIC0.36□□□□□ -2.35
Cldn9Q9Z0S7 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.36□□□□□ -2.35
Cldn9Q9Z0S7 Mir1933-201ENSMUST00000158930 88 ntBASIC0.36□□□□□ -2.35
Cldn9Q9Z0S7 Gm26116-201ENSMUST00000175600 77 ntBASIC0.36□□□□□ -2.35
Cldn9Q9Z0S7 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.36□□□□□ -2.35
Cldn9Q9Z0S7 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.36□□□□□ -2.35
Cldn9Q9Z0S7 AC192333.1-201ENSMUST00000224573 376 ntBASIC0.36□□□□□ -2.35
Cldn9Q9Z0S7 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.35□□□□□ -2.35
Cldn9Q9Z0S7 Gm22759-201ENSMUST00000102276 96 ntBASIC0.35□□□□□ -2.35
Cldn9Q9Z0S7 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Cldn9Q9Z0S7 Gm12771-201ENSMUST00000120246 135 ntBASIC0.35□□□□□ -2.35
Cldn9Q9Z0S7 Gm22387-201ENSMUST00000158191 131 ntBASIC0.35□□□□□ -2.35
Cldn9Q9Z0S7 Gm23416-201ENSMUST00000175520 95 ntBASIC0.35□□□□□ -2.35
Cldn9Q9Z0S7 Gm22450-201ENSMUST00000179641 107 ntBASIC0.35□□□□□ -2.35
Cldn9Q9Z0S7 Gm25473-201ENSMUST00000180191 107 ntBASIC0.35□□□□□ -2.35
Cldn9Q9Z0S7 Gm44211-201ENSMUST00000204867 145 ntBASIC0.35□□□□□ -2.35
Cldn9Q9Z0S7 Gm24856-201ENSMUST00000082809 107 ntBASIC0.35□□□□□ -2.35
Cldn9Q9Z0S7 Gm26071-201ENSMUST00000083261 107 ntBASIC0.35□□□□□ -2.35
Cldn9Q9Z0S7 Gm24521-201ENSMUST00000083958 107 ntBASIC0.35□□□□□ -2.35
Cldn9Q9Z0S7 Gm23941-201ENSMUST00000101953 107 ntBASIC0.34□□□□□ -2.36
Cldn9Q9Z0S7 Mir547-201ENSMUST00000102051 78 ntBASIC0.34□□□□□ -2.36
Cldn9Q9Z0S7 Gm25393-201ENSMUST00000157336 285 ntBASIC0.34□□□□□ -2.36
Cldn9Q9Z0S7 Gm22080-201ENSMUST00000157591 106 ntBASIC0.34□□□□□ -2.36
Cldn9Q9Z0S7 Gm36189-201ENSMUST00000204113 523 ntBASIC0.34□□□□□ -2.36
Cldn9Q9Z0S7 Gm26326-201ENSMUST00000083070 129 ntBASIC0.34□□□□□ -2.36
Cldn9Q9Z0S7 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Cldn9Q9Z0S7 Gm24171-201ENSMUST00000104126 131 ntBASIC0.33□□□□□ -2.36
Cldn9Q9Z0S7 Gm26482-201ENSMUST00000158015 62 ntBASIC0.33□□□□□ -2.36
Cldn9Q9Z0S7 Gm23763-201ENSMUST00000158345 60 ntBASIC0.33□□□□□ -2.36
Cldn9Q9Z0S7 Gm23375-201ENSMUST00000175407 83 ntBASIC0.33□□□□□ -2.36
Cldn9Q9Z0S7 Gm42594-201ENSMUST00000199511 246 ntBASIC0.33□□□□□ -2.36
Cldn9Q9Z0S7 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.33□□□□□ -2.36
Cldn9Q9Z0S7 Gm45673-201ENSMUST00000210293 358 ntBASIC0.33□□□□□ -2.36
Cldn9Q9Z0S7 Gm45313-201ENSMUST00000210584 178 ntBASIC0.33□□□□□ -2.36
Cldn9Q9Z0S7 Gm7240-201ENSMUST00000220769 664 ntBASIC0.33□□□□□ -2.36
Cldn9Q9Z0S7 Mir30a-201ENSMUST00000083471 71 ntBASIC0.33□□□□□ -2.36
Cldn9Q9Z0S7 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
Cldn9Q9Z0S7 Gm25110-201ENSMUST00000116684 121 ntBASIC0.32□□□□□ -2.36
Cldn9Q9Z0S7 Gm25775-201ENSMUST00000116716 121 ntBASIC0.32□□□□□ -2.36
Cldn9Q9Z0S7 Gm24795-201ENSMUST00000116737 121 ntBASIC0.32□□□□□ -2.36
Cldn9Q9Z0S7 Gm25171-201ENSMUST00000116926 121 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 135 ms