Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm25828-201ENSMUST00000157087 95 ntBASIC1.52□□□□□ -2.17
Trim54Q9ERP3 Gm23419-201ENSMUST00000175523 84 ntBASIC1.52□□□□□ -2.17
Trim54Q9ERP3 Gm27265-201ENSMUST00000183559 77 ntBASIC1.52□□□□□ -2.17
Trim54Q9ERP3 Gm27672-201ENSMUST00000183751 204 ntBASIC1.52□□□□□ -2.17
Trim54Q9ERP3 Gm29603-201ENSMUST00000186792 334 ntBASIC1.52□□□□□ -2.17
Trim54Q9ERP3 Mir6962-201ENSMUST00000199512 63 ntBASIC1.52□□□□□ -2.17
Trim54Q9ERP3 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
Trim54Q9ERP3 Gm45544-201ENSMUST00000211130 88 ntBASIC1.52□□□□□ -2.17
Trim54Q9ERP3 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.52□□□□□ -2.17
Trim54Q9ERP3 Gm23299-201ENSMUST00000082708 79 ntBASIC1.52□□□□□ -2.17
Trim54Q9ERP3 Snord100-201ENSMUST00000116836 74 ntBASIC1.51□□□□□ -2.17
Trim54Q9ERP3 Gm13922-201ENSMUST00000119505 156 ntBASIC1.51□□□□□ -2.17
Trim54Q9ERP3 Gm25985-201ENSMUST00000122677 107 ntBASIC1.51□□□□□ -2.17
Trim54Q9ERP3 Gm24895-201ENSMUST00000122742 74 ntBASIC1.51□□□□□ -2.17
Trim54Q9ERP3 Gm22929-201ENSMUST00000175517 107 ntBASIC1.51□□□□□ -2.17
Trim54Q9ERP3 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.51□□□□□ -2.17
Trim54Q9ERP3 Gm25855-201ENSMUST00000082787 72 ntBASIC1.51□□□□□ -2.17
Trim54Q9ERP3 Gm26204-201ENSMUST00000082906 107 ntBASIC1.51□□□□□ -2.17
Trim54Q9ERP3 Mir186-201ENSMUST00000083497 71 ntBASIC1.51□□□□□ -2.17
Trim54Q9ERP3 BC022960-201ENSMUST00000119987 1815 ntBASIC1.51□□□□□ -2.17
Trim54Q9ERP3 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Trim54Q9ERP3 Gm26082-201ENSMUST00000104070 127 ntBASIC1.5□□□□□ -2.17
Trim54Q9ERP3 Gm24559-201ENSMUST00000157519 121 ntBASIC1.5□□□□□ -2.17
Trim54Q9ERP3 Gm22963-201ENSMUST00000157960 91 ntBASIC1.5□□□□□ -2.17
Trim54Q9ERP3 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Trim54Q9ERP3 Mir343-201ENSMUST00000102360 75 ntBASIC1.49□□□□□ -2.17
Trim54Q9ERP3 Gm14567-201ENSMUST00000117155 174 ntBASIC1.49□□□□□ -2.17
Trim54Q9ERP3 Gm22164-201ENSMUST00000158413 106 ntBASIC1.49□□□□□ -2.17
Trim54Q9ERP3 Gm24345-201ENSMUST00000158706 124 ntBASIC1.49□□□□□ -2.17
Trim54Q9ERP3 Gm22476-201ENSMUST00000158902 100 ntBASIC1.49□□□□□ -2.17
Trim54Q9ERP3 Gm27894-201ENSMUST00000184177 92 ntBASIC1.49□□□□□ -2.17
Trim54Q9ERP3 Snord80-202ENSMUST00000199023 77 ntBASIC1.49□□□□□ -2.17
Trim54Q9ERP3 Gm22283-201ENSMUST00000082556 161 ntBASIC1.49□□□□□ -2.17
Trim54Q9ERP3 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.49□□□□□ -2.17
Trim54Q9ERP3 Gm20391-201ENSMUST00000174722 106 ntBASIC1.48□□□□□ -2.17
Trim54Q9ERP3 Mir3968-201ENSMUST00000175355 100 ntBASIC1.48□□□□□ -2.17
Trim54Q9ERP3 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.48□□□□□ -2.17
Trim54Q9ERP3 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.48□□□□□ -2.17
Trim54Q9ERP3 Gm25409-201ENSMUST00000083764 131 ntBASIC1.48□□□□□ -2.17
Trim54Q9ERP3 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.47□□□□□ -2.17
Trim54Q9ERP3 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.47□□□□□ -2.17
Trim54Q9ERP3 Gm25992-201ENSMUST00000102437 109 ntBASIC1.47□□□□□ -2.17
Trim54Q9ERP3 Gm22148-201ENSMUST00000104445 107 ntBASIC1.47□□□□□ -2.17
Trim54Q9ERP3 Gm24379-201ENSMUST00000122695 86 ntBASIC1.47□□□□□ -2.17
Trim54Q9ERP3 Gm26415-201ENSMUST00000157673 292 ntBASIC1.47□□□□□ -2.17
Trim54Q9ERP3 Gm22850-201ENSMUST00000157714 82 ntBASIC1.47□□□□□ -2.17
Trim54Q9ERP3 Gm23221-201ENSMUST00000158118 93 ntBASIC1.47□□□□□ -2.17
Trim54Q9ERP3 Snord96a-201ENSMUST00000082791 81 ntBASIC1.47□□□□□ -2.17
Trim54Q9ERP3 Snord47-201ENSMUST00000083034 77 ntBASIC1.47□□□□□ -2.17
Trim54Q9ERP3 Gm24494-201ENSMUST00000083804 81 ntBASIC1.47□□□□□ -2.17
Trim54Q9ERP3 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.46□□□□□ -2.18
Trim54Q9ERP3 Gm23106-201ENSMUST00000157554 101 ntBASIC1.46□□□□□ -2.18
Trim54Q9ERP3 Gm22557-201ENSMUST00000157804 102 ntBASIC1.46□□□□□ -2.18
Trim54Q9ERP3 Gm26073-201ENSMUST00000179906 127 ntBASIC1.46□□□□□ -2.18
Trim54Q9ERP3 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Trim54Q9ERP3 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.46□□□□□ -2.18
Trim54Q9ERP3 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.46□□□□□ -2.18
Trim54Q9ERP3 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.46□□□□□ -2.18
Trim54Q9ERP3 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Trim54Q9ERP3 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Trim54Q9ERP3 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.45□□□□□ -2.18
Trim54Q9ERP3 Gm26074-201ENSMUST00000104063 129 ntBASIC1.45□□□□□ -2.18
Trim54Q9ERP3 Gm14923-201ENSMUST00000118270 155 ntBASIC1.45□□□□□ -2.18
Trim54Q9ERP3 Gm22802-201ENSMUST00000175621 89 ntBASIC1.45□□□□□ -2.18
Trim54Q9ERP3 Gm44464-201ENSMUST00000198010 138 ntBASIC1.45□□□□□ -2.18
Trim54Q9ERP3 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Trim54Q9ERP3 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trim54Q9ERP3 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.44□□□□□ -2.18
Trim54Q9ERP3 Gm22785-201ENSMUST00000104087 132 ntBASIC1.44□□□□□ -2.18
Trim54Q9ERP3 Gm24915-201ENSMUST00000157288 78 ntBASIC1.44□□□□□ -2.18
Trim54Q9ERP3 Gm25663-201ENSMUST00000157698 135 ntBASIC1.44□□□□□ -2.18
Trim54Q9ERP3 Gm22989-201ENSMUST00000158313 86 ntBASIC1.44□□□□□ -2.18
Trim54Q9ERP3 Gm37997-201ENSMUST00000193515 267 ntBASIC1.44□□□□□ -2.18
Trim54Q9ERP3 Gm37116-201ENSMUST00000195161 147 ntBASIC1.44□□□□□ -2.18
Trim54Q9ERP3 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.44□□□□□ -2.18
Trim54Q9ERP3 Gm22704-201ENSMUST00000083027 137 ntBASIC1.44□□□□□ -2.18
Trim54Q9ERP3 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trim54Q9ERP3 Gm25949-201ENSMUST00000175333 114 ntBASIC1.43□□□□□ -2.18
Trim54Q9ERP3 Mir7059-201ENSMUST00000184825 59 ntBASIC1.43□□□□□ -2.18
Trim54Q9ERP3 Gm28862-201ENSMUST00000188246 163 ntBASIC1.43□□□□□ -2.18
Trim54Q9ERP3 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.43□□□□□ -2.18
Trim54Q9ERP3 Snora20-201ENSMUST00000082703 128 ntBASIC1.43□□□□□ -2.18
Trim54Q9ERP3 Gm22973-201ENSMUST00000083298 191 ntBASIC1.43□□□□□ -2.18
Trim54Q9ERP3 Gm22738-201ENSMUST00000083440 147 ntBASIC1.43□□□□□ -2.18
Trim54Q9ERP3 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.42□□□□□ -2.18
Trim54Q9ERP3 Gm23760-201ENSMUST00000158350 116 ntBASIC1.42□□□□□ -2.18
Trim54Q9ERP3 Gm26360-201ENSMUST00000158872 103 ntBASIC1.42□□□□□ -2.18
Trim54Q9ERP3 Gm24154-201ENSMUST00000175261 130 ntBASIC1.42□□□□□ -2.18
Trim54Q9ERP3 Mir7063-201ENSMUST00000184158 91 ntBASIC1.42□□□□□ -2.18
Trim54Q9ERP3 Gm45471-201ENSMUST00000211270 281 ntBASIC1.42□□□□□ -2.18
Trim54Q9ERP3 Gm22169-201ENSMUST00000083229 107 ntBASIC1.42□□□□□ -2.18
Trim54Q9ERP3 Gm25759-201ENSMUST00000103988 129 ntBASIC1.41□□□□□ -2.18
Trim54Q9ERP3 Gm12432-201ENSMUST00000119540 186 ntBASIC1.41□□□□□ -2.18
Trim54Q9ERP3 Snord13-201ENSMUST00000157627 104 ntBASIC1.41□□□□□ -2.18
Trim54Q9ERP3 Gm23083-201ENSMUST00000157851 116 ntBASIC1.41□□□□□ -2.18
Trim54Q9ERP3 Gm16404-201ENSMUST00000177739 468 ntBASIC1.41□□□□□ -2.18
Trim54Q9ERP3 Gm14598-201ENSMUST00000180109 468 ntBASIC1.41□□□□□ -2.18
Trim54Q9ERP3 Gm14625-201ENSMUST00000180231 468 ntBASIC1.41□□□□□ -2.18
Trim54Q9ERP3 Gm25650-201ENSMUST00000083784 162 ntBASIC1.41□□□□□ -2.18
Trim54Q9ERP3 Gm22780-201ENSMUST00000104084 132 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms