Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm23579-201ENSMUST00000158528 103 ntBASIC0.68□□□□□ -2.3
Lrif1Q8CDD9 Gm23581-201ENSMUST00000158531 63 ntBASIC0.68□□□□□ -2.3
Lrif1Q8CDD9 Gm16539-201ENSMUST00000160086 327 ntBASIC0.68□□□□□ -2.3
Lrif1Q8CDD9 Mir15a-201ENSMUST00000175266 84 ntBASIC0.68□□□□□ -2.3
Lrif1Q8CDD9 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Lrif1Q8CDD9 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.68□□□□□ -2.3
Lrif1Q8CDD9 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Lrif1Q8CDD9 Gm25634-201ENSMUST00000082667 105 ntBASIC0.68□□□□□ -2.3
Lrif1Q8CDD9 Rny1-201ENSMUST00000083767 112 ntBASIC0.68□□□□□ -2.3
Lrif1Q8CDD9 Mir451a-201ENSMUST00000093557 72 ntBASIC0.68□□□□□ -2.3
Lrif1Q8CDD9 Gm11204-201ENSMUST00000122438 147 ntBASIC0.67□□□□□ -2.3
Lrif1Q8CDD9 Gm25544-201ENSMUST00000122676 120 ntBASIC0.67□□□□□ -2.3
Lrif1Q8CDD9 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.67□□□□□ -2.3
Lrif1Q8CDD9 Gm44948-201ENSMUST00000209050 149 ntBASIC0.67□□□□□ -2.3
Lrif1Q8CDD9 Gm45471-201ENSMUST00000211270 281 ntBASIC0.67□□□□□ -2.3
Lrif1Q8CDD9 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.67□□□□□ -2.3
Lrif1Q8CDD9 Snora20-201ENSMUST00000082703 128 ntBASIC0.67□□□□□ -2.3
Lrif1Q8CDD9 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.67□□□□□ -2.3
Lrif1Q8CDD9 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Lrif1Q8CDD9 Gm22051-201ENSMUST00000117002 127 ntBASIC0.66□□□□□ -2.3
Lrif1Q8CDD9 Gm14792-201ENSMUST00000119725 258 ntBASIC0.66□□□□□ -2.3
Lrif1Q8CDD9 Gm13246-201ENSMUST00000120994 315 ntBASIC0.66□□□□□ -2.3
Lrif1Q8CDD9 Gm22163-201ENSMUST00000158408 135 ntBASIC0.66□□□□□ -2.3
Lrif1Q8CDD9 Gm24323-201ENSMUST00000175342 77 ntBASIC0.66□□□□□ -2.3
Lrif1Q8CDD9 Gm16404-201ENSMUST00000177739 468 ntBASIC0.66□□□□□ -2.3
Lrif1Q8CDD9 Gm23002-201ENSMUST00000179221 107 ntBASIC0.66□□□□□ -2.3
Lrif1Q8CDD9 Gm14598-201ENSMUST00000180109 468 ntBASIC0.66□□□□□ -2.3
Lrif1Q8CDD9 Gm14625-201ENSMUST00000180231 468 ntBASIC0.66□□□□□ -2.3
Lrif1Q8CDD9 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.66□□□□□ -2.3
Lrif1Q8CDD9 Mir362-201ENSMUST00000093592 65 ntBASIC0.66□□□□□ -2.3
Lrif1Q8CDD9 Mir875-201ENSMUST00000104698 78 ntBASIC0.65□□□□□ -2.31
Lrif1Q8CDD9 Gm25318-201ENSMUST00000122554 314 ntBASIC0.65□□□□□ -2.31
Lrif1Q8CDD9 Gm26090-201ENSMUST00000157897 128 ntBASIC0.65□□□□□ -2.31
Lrif1Q8CDD9 Gm25901-201ENSMUST00000158494 130 ntBASIC0.65□□□□□ -2.31
Lrif1Q8CDD9 Gm23008-201ENSMUST00000158946 80 ntBASIC0.65□□□□□ -2.31
Lrif1Q8CDD9 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.65□□□□□ -2.31
Lrif1Q8CDD9 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.31
Lrif1Q8CDD9 Mir101a-201ENSMUST00000083517 83 ntBASIC0.65□□□□□ -2.31
Lrif1Q8CDD9 Mir709-201ENSMUST00000102190 88 ntBASIC0.64□□□□□ -2.31
Lrif1Q8CDD9 Gm15069-201ENSMUST00000117792 192 ntBASIC0.64□□□□□ -2.31
Lrif1Q8CDD9 Gm15068-201ENSMUST00000119796 192 ntBASIC0.64□□□□□ -2.31
Lrif1Q8CDD9 Gm24634-201ENSMUST00000158672 107 ntBASIC0.64□□□□□ -2.31
Lrif1Q8CDD9 Mir3079-201ENSMUST00000175428 90 ntBASIC0.64□□□□□ -2.31
Lrif1Q8CDD9 Mir669k-201ENSMUST00000177742 127 ntBASIC0.64□□□□□ -2.31
Lrif1Q8CDD9 Gm25673-201ENSMUST00000179957 127 ntBASIC0.64□□□□□ -2.31
Lrif1Q8CDD9 Gm22358-201ENSMUST00000082877 122 ntBASIC0.64□□□□□ -2.31
Lrif1Q8CDD9 Gm25188-201ENSMUST00000083913 122 ntBASIC0.64□□□□□ -2.31
Lrif1Q8CDD9 Gm23203-201ENSMUST00000104374 107 ntBASIC0.63□□□□□ -2.31
Lrif1Q8CDD9 Gm23991-201ENSMUST00000117033 93 ntBASIC0.63□□□□□ -2.31
Lrif1Q8CDD9 Gm12771-201ENSMUST00000120246 135 ntBASIC0.63□□□□□ -2.31
Lrif1Q8CDD9 Gm24747-201ENSMUST00000157835 87 ntBASIC0.63□□□□□ -2.31
Lrif1Q8CDD9 Gm25935-201ENSMUST00000178746 107 ntBASIC0.63□□□□□ -2.31
Lrif1Q8CDD9 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.63□□□□□ -2.31
Lrif1Q8CDD9 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
Lrif1Q8CDD9 Gm11248-201ENSMUST00000119568 201 ntBASIC0.62□□□□□ -2.31
Lrif1Q8CDD9 Gm25968-201ENSMUST00000157167 100 ntBASIC0.62□□□□□ -2.31
Lrif1Q8CDD9 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.62□□□□□ -2.31
Lrif1Q8CDD9 Gm23679-201ENSMUST00000083161 119 ntBASIC0.62□□□□□ -2.31
Lrif1Q8CDD9 Gm24616-201ENSMUST00000083274 139 ntBASIC0.62□□□□□ -2.31
Lrif1Q8CDD9 Gm23451-201ENSMUST00000083328 122 ntBASIC0.62□□□□□ -2.31
Lrif1Q8CDD9 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.61□□□□□ -2.31
Lrif1Q8CDD9 Snord89-201ENSMUST00000104516 110 ntBASIC0.61□□□□□ -2.31
Lrif1Q8CDD9 Gm24594-201ENSMUST00000122502 99 ntBASIC0.61□□□□□ -2.31
Lrif1Q8CDD9 Gm23655-201ENSMUST00000122627 105 ntBASIC0.61□□□□□ -2.31
Lrif1Q8CDD9 Gm26274-201ENSMUST00000157103 321 ntBASIC0.61□□□□□ -2.31
Lrif1Q8CDD9 Gm23466-201ENSMUST00000157133 106 ntBASIC0.61□□□□□ -2.31
Lrif1Q8CDD9 Gm26402-201ENSMUST00000158499 113 ntBASIC0.61□□□□□ -2.31
Lrif1Q8CDD9 Gm25362-201ENSMUST00000158854 105 ntBASIC0.61□□□□□ -2.31
Lrif1Q8CDD9 Mir6364-201ENSMUST00000183396 86 ntBASIC0.61□□□□□ -2.31
Lrif1Q8CDD9 Gm37715-201ENSMUST00000193206 235 ntBASIC0.61□□□□□ -2.31
Lrif1Q8CDD9 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.61□□□□□ -2.31
Lrif1Q8CDD9 Gm22686-201ENSMUST00000082847 100 ntBASIC0.61□□□□□ -2.31
Lrif1Q8CDD9 Gm13922-201ENSMUST00000119505 156 ntBASIC0.6□□□□□ -2.31
Lrif1Q8CDD9 Gm11388-201ENSMUST00000120908 159 ntBASIC0.6□□□□□ -2.31
Lrif1Q8CDD9 Gm16265-201ENSMUST00000134558 108 ntBASIC0.6□□□□□ -2.31
Lrif1Q8CDD9 Gm25044-201ENSMUST00000158603 104 ntBASIC0.6□□□□□ -2.31
Lrif1Q8CDD9 Gm24678-201ENSMUST00000158756 104 ntBASIC0.6□□□□□ -2.31
Lrif1Q8CDD9 Mir216a-201ENSMUST00000083605 72 ntBASIC0.6□□□□□ -2.31
Lrif1Q8CDD9 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.6□□□□□ -2.31
Lrif1Q8CDD9 Snord33-201ENSMUST00000083694 84 ntBASIC0.6□□□□□ -2.31
Lrif1Q8CDD9 Gm24635-201ENSMUST00000122712 128 ntBASIC0.59□□□□□ -2.31
Lrif1Q8CDD9 Mir6336-201ENSMUST00000183581 130 ntBASIC0.59□□□□□ -2.31
Lrif1Q8CDD9 Gm44464-201ENSMUST00000198010 138 ntBASIC0.59□□□□□ -2.31
Lrif1Q8CDD9 Mir3970-201ENSMUST00000199287 90 ntBASIC0.59□□□□□ -2.31
Lrif1Q8CDD9 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.59□□□□□ -2.31
Lrif1Q8CDD9 Gm22302-201ENSMUST00000082657 106 ntBASIC0.59□□□□□ -2.31
Lrif1Q8CDD9 Gm23060-201ENSMUST00000102345 109 ntBASIC0.58□□□□□ -2.32
Lrif1Q8CDD9 Gm25378-201ENSMUST00000104333 129 ntBASIC0.58□□□□□ -2.32
Lrif1Q8CDD9 Gm25323-201ENSMUST00000122555 103 ntBASIC0.58□□□□□ -2.32
Lrif1Q8CDD9 Gm22767-201ENSMUST00000158365 165 ntBASIC0.58□□□□□ -2.32
Lrif1Q8CDD9 Gm24460-201ENSMUST00000082731 106 ntBASIC0.58□□□□□ -2.32
Lrif1Q8CDD9 Gm22482-201ENSMUST00000122563 359 ntBASIC0.57□□□□□ -2.32
Lrif1Q8CDD9 Gm22796-201ENSMUST00000157234 106 ntBASIC0.57□□□□□ -2.32
Lrif1Q8CDD9 Gm24559-201ENSMUST00000157519 121 ntBASIC0.57□□□□□ -2.32
Lrif1Q8CDD9 Gm23375-201ENSMUST00000175407 83 ntBASIC0.57□□□□□ -2.32
Lrif1Q8CDD9 Gm36956-201ENSMUST00000193830 214 ntBASIC0.57□□□□□ -2.32
Lrif1Q8CDD9 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.57□□□□□ -2.32
Lrif1Q8CDD9 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.57□□□□□ -2.32
Lrif1Q8CDD9 Gm23987-201ENSMUST00000117039 129 ntBASIC0.56□□□□□ -2.32
Lrif1Q8CDD9 Gm38019-201ENSMUST00000195133 380 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 172 ms