Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Gm29544-201ENSMUST00000188860 313 ntBASIC1.28□□□□□ -2.2
Tdp1Q8BJ37 Gm28808-201ENSMUST00000190978 313 ntBASIC1.28□□□□□ -2.2
Tdp1Q8BJ37 Snord14a-201ENSMUST00000082807 87 ntBASIC1.28□□□□□ -2.2
Tdp1Q8BJ37 Gm22686-201ENSMUST00000082847 100 ntBASIC1.28□□□□□ -2.2
Tdp1Q8BJ37 Gm23461-201ENSMUST00000083265 107 ntBASIC1.28□□□□□ -2.2
Tdp1Q8BJ37 Gm25423-201ENSMUST00000157609 107 ntBASIC1.27□□□□□ -2.21
Tdp1Q8BJ37 Gm25750-201ENSMUST00000175483 112 ntBASIC1.27□□□□□ -2.21
Tdp1Q8BJ37 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.27□□□□□ -2.21
Tdp1Q8BJ37 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.27□□□□□ -2.21
Tdp1Q8BJ37 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.26□□□□□ -2.21
Tdp1Q8BJ37 Mir653-201ENSMUST00000102402 85 ntBASIC1.26□□□□□ -2.21
Tdp1Q8BJ37 Snord13-201ENSMUST00000157627 104 ntBASIC1.26□□□□□ -2.21
Tdp1Q8BJ37 Mir1931-201ENSMUST00000158589 119 ntBASIC1.26□□□□□ -2.21
Tdp1Q8BJ37 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.26□□□□□ -2.21
Tdp1Q8BJ37 Gm23864-201ENSMUST00000177607 107 ntBASIC1.26□□□□□ -2.21
Tdp1Q8BJ37 Mir6394-201ENSMUST00000184738 99 ntBASIC1.26□□□□□ -2.21
Tdp1Q8BJ37 Gm28669-201ENSMUST00000188400 100 ntBASIC1.26□□□□□ -2.21
Tdp1Q8BJ37 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.26□□□□□ -2.21
Tdp1Q8BJ37 Gm22743-201ENSMUST00000083445 133 ntBASIC1.26□□□□□ -2.21
Tdp1Q8BJ37 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.26□□□□□ -2.21
Tdp1Q8BJ37 Gm24865-201ENSMUST00000103246 96 ntBASIC1.25□□□□□ -2.21
Tdp1Q8BJ37 Snord71-201ENSMUST00000104361 85 ntBASIC1.25□□□□□ -2.21
Tdp1Q8BJ37 Gm25267-201ENSMUST00000158522 63 ntBASIC1.25□□□□□ -2.21
Tdp1Q8BJ37 Gm27803-201ENSMUST00000183763 119 ntBASIC1.25□□□□□ -2.21
Tdp1Q8BJ37 Gm42506-201ENSMUST00000202009 150 ntBASIC1.25□□□□□ -2.21
Tdp1Q8BJ37 Gm26225-201ENSMUST00000082508 135 ntBASIC1.25□□□□□ -2.21
Tdp1Q8BJ37 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.25□□□□□ -2.21
Tdp1Q8BJ37 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Tdp1Q8BJ37 Mir544-201ENSMUST00000103813 78 ntBASIC1.24□□□□□ -2.21
Tdp1Q8BJ37 Gm11856-201ENSMUST00000118712 276 ntBASIC1.24□□□□□ -2.21
Tdp1Q8BJ37 Gm11334-201ENSMUST00000121969 156 ntBASIC1.24□□□□□ -2.21
Tdp1Q8BJ37 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.24□□□□□ -2.21
Tdp1Q8BJ37 Gm29603-201ENSMUST00000186792 334 ntBASIC1.24□□□□□ -2.21
Tdp1Q8BJ37 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.24□□□□□ -2.21
Tdp1Q8BJ37 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.24□□□□□ -2.21
Tdp1Q8BJ37 Gm25855-201ENSMUST00000082787 72 ntBASIC1.24□□□□□ -2.21
Tdp1Q8BJ37 Gm25038-201ENSMUST00000082928 130 ntBASIC1.24□□□□□ -2.21
Tdp1Q8BJ37 Gm22884-201ENSMUST00000083127 140 ntBASIC1.24□□□□□ -2.21
Tdp1Q8BJ37 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.24□□□□□ -2.21
Tdp1Q8BJ37 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.24□□□□□ -2.21
Tdp1Q8BJ37 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.23□□□□□ -2.21
Tdp1Q8BJ37 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
Tdp1Q8BJ37 Gm25506-201ENSMUST00000104339 70 ntBASIC1.23□□□□□ -2.21
Tdp1Q8BJ37 Gm25828-201ENSMUST00000157087 95 ntBASIC1.23□□□□□ -2.21
Tdp1Q8BJ37 Gm23277-201ENSMUST00000157914 136 ntBASIC1.23□□□□□ -2.21
Tdp1Q8BJ37 Gm22485-201ENSMUST00000157990 109 ntBASIC1.23□□□□□ -2.21
Tdp1Q8BJ37 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Tdp1Q8BJ37 Mir5104-201ENSMUST00000175319 94 ntBASIC1.23□□□□□ -2.21
Tdp1Q8BJ37 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Tdp1Q8BJ37 Mir7675-201ENSMUST00000184262 58 ntBASIC1.23□□□□□ -2.21
Tdp1Q8BJ37 Gm27465-201ENSMUST00000184290 91 ntBASIC1.23□□□□□ -2.21
Tdp1Q8BJ37 Gm26204-201ENSMUST00000082906 107 ntBASIC1.23□□□□□ -2.21
Tdp1Q8BJ37 Gm15069-201ENSMUST00000117792 192 ntBASIC1.22□□□□□ -2.21
Tdp1Q8BJ37 Gm15068-201ENSMUST00000119796 192 ntBASIC1.22□□□□□ -2.21
Tdp1Q8BJ37 Gm25323-201ENSMUST00000122555 103 ntBASIC1.22□□□□□ -2.21
Tdp1Q8BJ37 Gm22888-201ENSMUST00000158640 77 ntBASIC1.22□□□□□ -2.21
Tdp1Q8BJ37 Gm20391-201ENSMUST00000174722 106 ntBASIC1.22□□□□□ -2.21
Tdp1Q8BJ37 Gm27285-201ENSMUST00000183875 127 ntBASIC1.22□□□□□ -2.21
Tdp1Q8BJ37 Gm37624-201ENSMUST00000193751 219 ntBASIC1.22□□□□□ -2.21
Tdp1Q8BJ37 Gm44483-201ENSMUST00000197203 97 ntBASIC1.22□□□□□ -2.21
Tdp1Q8BJ37 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.22□□□□□ -2.21
Tdp1Q8BJ37 Gm22980-201ENSMUST00000082608 70 ntBASIC1.22□□□□□ -2.21
Tdp1Q8BJ37 Mir302d-201ENSMUST00000083513 66 ntBASIC1.22□□□□□ -2.21
Tdp1Q8BJ37 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.21□□□□□ -2.22
Tdp1Q8BJ37 Gm24276-201ENSMUST00000102181 110 ntBASIC1.21□□□□□ -2.22
Tdp1Q8BJ37 Gm6952-201ENSMUST00000118629 159 ntBASIC1.21□□□□□ -2.22
Tdp1Q8BJ37 Gm13246-201ENSMUST00000120994 315 ntBASIC1.21□□□□□ -2.22
Tdp1Q8BJ37 Gm14671-201ENSMUST00000121790 262 ntBASIC1.21□□□□□ -2.22
Tdp1Q8BJ37 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.21□□□□□ -2.22
Tdp1Q8BJ37 Gm25069-201ENSMUST00000175238 86 ntBASIC1.21□□□□□ -2.22
Tdp1Q8BJ37 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.21□□□□□ -2.22
Tdp1Q8BJ37 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Tdp1Q8BJ37 Mir6381-201ENSMUST00000183426 87 ntBASIC1.21□□□□□ -2.22
Tdp1Q8BJ37 Mir1a-2-201ENSMUST00000198520 72 ntBASIC1.21□□□□□ -2.22
Tdp1Q8BJ37 Gm23299-201ENSMUST00000082708 79 ntBASIC1.21□□□□□ -2.22
Tdp1Q8BJ37 Gm22169-201ENSMUST00000083229 107 ntBASIC1.21□□□□□ -2.22
Tdp1Q8BJ37 Mir471-201ENSMUST00000093596 67 ntBASIC1.21□□□□□ -2.22
Tdp1Q8BJ37 Gm26089-201ENSMUST00000157898 107 ntBASIC1.2□□□□□ -2.22
Tdp1Q8BJ37 Gm26213-201ENSMUST00000158582 110 ntBASIC1.2□□□□□ -2.22
Tdp1Q8BJ37 Gm26160-201ENSMUST00000158965 63 ntBASIC1.2□□□□□ -2.22
Tdp1Q8BJ37 Mir721-201ENSMUST00000200230 88 ntBASIC1.2□□□□□ -2.22
Tdp1Q8BJ37 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Tdp1Q8BJ37 Gm25759-201ENSMUST00000103988 129 ntBASIC1.19□□□□□ -2.22
Tdp1Q8BJ37 Gm26074-201ENSMUST00000104063 129 ntBASIC1.19□□□□□ -2.22
Tdp1Q8BJ37 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.19□□□□□ -2.22
Tdp1Q8BJ37 Gm22477-201ENSMUST00000122569 316 ntBASIC1.19□□□□□ -2.22
Tdp1Q8BJ37 Gm24559-201ENSMUST00000157519 121 ntBASIC1.19□□□□□ -2.22
Tdp1Q8BJ37 Gm23996-201ENSMUST00000158062 131 ntBASIC1.19□□□□□ -2.22
Tdp1Q8BJ37 Gm24345-201ENSMUST00000158706 124 ntBASIC1.19□□□□□ -2.22
Tdp1Q8BJ37 Gm22403-201ENSMUST00000174919 84 ntBASIC1.19□□□□□ -2.22
Tdp1Q8BJ37 Mir3061-201ENSMUST00000175129 91 ntBASIC1.19□□□□□ -2.22
Tdp1Q8BJ37 Gm22565-201ENSMUST00000175540 69 ntBASIC1.19□□□□□ -2.22
Tdp1Q8BJ37 Gm26073-201ENSMUST00000179906 127 ntBASIC1.19□□□□□ -2.22
Tdp1Q8BJ37 Gm27419-201ENSMUST00000184576 109 ntBASIC1.19□□□□□ -2.22
Tdp1Q8BJ37 Gm24523-201ENSMUST00000083965 132 ntBASIC1.19□□□□□ -2.22
Tdp1Q8BJ37 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Tdp1Q8BJ37 Gm25878-201ENSMUST00000104327 93 ntBASIC1.18□□□□□ -2.22
Tdp1Q8BJ37 Mir880-201ENSMUST00000104809 78 ntBASIC1.18□□□□□ -2.22
Tdp1Q8BJ37 Gm25985-201ENSMUST00000122677 107 ntBASIC1.18□□□□□ -2.22
Tdp1Q8BJ37 Gm26415-201ENSMUST00000157673 292 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 138.9 ms