Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Mir547-201ENSMUST00000102051 78 ntBASIC2.62□□□□□ -1.99
Trim56Q80VI1 Gm25091-201ENSMUST00000103997 71 ntBASIC2.62□□□□□ -1.99
Trim56Q80VI1 Gm25377-201ENSMUST00000104334 129 ntBASIC2.62□□□□□ -1.99
Trim56Q80VI1 Mir344e-201ENSMUST00000104677 66 ntBASIC2.62□□□□□ -1.99
Trim56Q80VI1 Gm22796-201ENSMUST00000157234 106 ntBASIC2.62□□□□□ -1.99
Trim56Q80VI1 Gm24475-201ENSMUST00000157435 143 ntBASIC2.62□□□□□ -1.99
Trim56Q80VI1 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.62□□□□□ -1.99
Trim56Q80VI1 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trim56Q80VI1 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
Trim56Q80VI1 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.61□□□□□ -1.99
Trim56Q80VI1 Gm24769-201ENSMUST00000158506 129 ntBASIC2.61□□□□□ -1.99
Trim56Q80VI1 Gm22666-201ENSMUST00000158717 164 ntBASIC2.61□□□□□ -1.99
Trim56Q80VI1 Gm24877-201ENSMUST00000158779 116 ntBASIC2.61□□□□□ -1.99
Trim56Q80VI1 Gm24333-201ENSMUST00000175101 84 ntBASIC2.61□□□□□ -1.99
Trim56Q80VI1 Gm27446-201ENSMUST00000183963 89 ntBASIC2.61□□□□□ -1.99
Trim56Q80VI1 Gm24698-201ENSMUST00000083883 130 ntBASIC2.61□□□□□ -1.99
Trim56Q80VI1 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Trim56Q80VI1 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
Trim56Q80VI1 BC022960-201ENSMUST00000119987 1815 ntBASIC2.61□□□□□ -1.99
Trim56Q80VI1 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trim56Q80VI1 Gm23033-201ENSMUST00000157996 134 ntBASIC2.6□□□□□ -1.99
Trim56Q80VI1 Gm24000-201ENSMUST00000158063 89 ntBASIC2.6□□□□□ -1.99
Trim56Q80VI1 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.6□□□□□ -1.99
Trim56Q80VI1 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.6□□□□□ -1.99
Trim56Q80VI1 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.6□□□□□ -1.99
Trim56Q80VI1 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.59□□□□□ -1.99
Trim56Q80VI1 Gm25996-201ENSMUST00000175393 117 ntBASIC2.59□□□□□ -1.99
Trim56Q80VI1 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trim56Q80VI1 Mir378a-201ENSMUST00000198300 66 ntBASIC2.59□□□□□ -1.99
Trim56Q80VI1 Mir3069-201ENSMUST00000198802 65 ntBASIC2.59□□□□□ -1.99
Trim56Q80VI1 Gm23370-201ENSMUST00000199545 130 ntBASIC2.59□□□□□ -1.99
Trim56Q80VI1 Gm45522-201ENSMUST00000210784 166 ntBASIC2.59□□□□□ -1.99
Trim56Q80VI1 Gm22283-201ENSMUST00000082556 161 ntBASIC2.59□□□□□ -1.99
Trim56Q80VI1 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trim56Q80VI1 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -1.99
Trim56Q80VI1 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Trim56Q80VI1 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.59□□□□□ -2
Trim56Q80VI1 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.58□□□□□ -2
Trim56Q80VI1 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Trim56Q80VI1 Gm23654-201ENSMUST00000116758 126 ntBASIC2.58□□□□□ -2
Trim56Q80VI1 Gm22159-201ENSMUST00000158412 130 ntBASIC2.58□□□□□ -2
Trim56Q80VI1 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trim56Q80VI1 Gm22743-201ENSMUST00000083445 133 ntBASIC2.58□□□□□ -2
Trim56Q80VI1 Mir490-201ENSMUST00000093567 84 ntBASIC2.58□□□□□ -2
Trim56Q80VI1 Gm23551-201ENSMUST00000116852 121 ntBASIC2.57□□□□□ -2
Trim56Q80VI1 Gm12309-201ENSMUST00000119889 182 ntBASIC2.57□□□□□ -2
Trim56Q80VI1 Gm25544-201ENSMUST00000122676 120 ntBASIC2.57□□□□□ -2
Trim56Q80VI1 Gm24250-201ENSMUST00000157320 135 ntBASIC2.57□□□□□ -2
Trim56Q80VI1 Gm24345-201ENSMUST00000158706 124 ntBASIC2.57□□□□□ -2
Trim56Q80VI1 Gm22093-201ENSMUST00000158980 111 ntBASIC2.57□□□□□ -2
Trim56Q80VI1 Gm23770-201ENSMUST00000178009 108 ntBASIC2.57□□□□□ -2
Trim56Q80VI1 Gm22832-201ENSMUST00000178022 108 ntBASIC2.57□□□□□ -2
Trim56Q80VI1 Gm23863-201ENSMUST00000178265 108 ntBASIC2.57□□□□□ -2
Trim56Q80VI1 Gm24828-201ENSMUST00000178507 108 ntBASIC2.57□□□□□ -2
Trim56Q80VI1 Gm23052-201ENSMUST00000178633 108 ntBASIC2.57□□□□□ -2
Trim56Q80VI1 Gm25729-201ENSMUST00000179050 108 ntBASIC2.57□□□□□ -2
Trim56Q80VI1 Gm25359-201ENSMUST00000179315 108 ntBASIC2.57□□□□□ -2
Trim56Q80VI1 Gm22624-201ENSMUST00000179913 108 ntBASIC2.57□□□□□ -2
Trim56Q80VI1 Mir6377-201ENSMUST00000183760 114 ntBASIC2.57□□□□□ -2
Trim56Q80VI1 AC158598.2-201ENSMUST00000213397 3832 ntBASIC2.57□□□□□ -2
Trim56Q80VI1 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.57□□□□□ -2
Trim56Q80VI1 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.57□□□□□ -2
Trim56Q80VI1 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trim56Q80VI1 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.56□□□□□ -2
Trim56Q80VI1 Gm13433-201ENSMUST00000121701 240 ntBASIC2.56□□□□□ -2
Trim56Q80VI1 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.56□□□□□ -2
Trim56Q80VI1 Gm25978-201ENSMUST00000158698 90 ntBASIC2.56□□□□□ -2
Trim56Q80VI1 Gm26498-201ENSMUST00000177799 79 ntBASIC2.56□□□□□ -2
Trim56Q80VI1 Gm26230-201ENSMUST00000180141 79 ntBASIC2.56□□□□□ -2
Trim56Q80VI1 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.56□□□□□ -2
Trim56Q80VI1 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.56□□□□□ -2
Trim56Q80VI1 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trim56Q80VI1 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.56□□□□□ -2
Trim56Q80VI1 Gm22196-201ENSMUST00000116865 109 ntBASIC2.55□□□□□ -2
Trim56Q80VI1 Gm22947-201ENSMUST00000158559 91 ntBASIC2.55□□□□□ -2
Trim56Q80VI1 Gm23181-201ENSMUST00000158685 110 ntBASIC2.55□□□□□ -2
Trim56Q80VI1 Gm23548-201ENSMUST00000158963 106 ntBASIC2.55□□□□□ -2
Trim56Q80VI1 Mir6928-201ENSMUST00000185166 70 ntBASIC2.55□□□□□ -2
Trim56Q80VI1 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.55□□□□□ -2
Trim56Q80VI1 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trim56Q80VI1 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trim56Q80VI1 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.54□□□□□ -2
Trim56Q80VI1 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.54□□□□□ -2
Trim56Q80VI1 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.54□□□□□ -2
Trim56Q80VI1 Gm22999-201ENSMUST00000157082 88 ntBASIC2.54□□□□□ -2
Trim56Q80VI1 Gm24238-201ENSMUST00000157792 98 ntBASIC2.54□□□□□ -2
Trim56Q80VI1 Gm22888-201ENSMUST00000158640 77 ntBASIC2.54□□□□□ -2
Trim56Q80VI1 Mir3094-201ENSMUST00000175121 64 ntBASIC2.54□□□□□ -2
Trim56Q80VI1 Gm26073-201ENSMUST00000179906 127 ntBASIC2.54□□□□□ -2
Trim56Q80VI1 Gm45268-201ENSMUST00000210046 370 ntBASIC2.54□□□□□ -2
Trim56Q80VI1 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.54□□□□□ -2
Trim56Q80VI1 Gm7214-201ENSMUST00000222428 272 ntBASIC2.54□□□□□ -2
Trim56Q80VI1 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trim56Q80VI1 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trim56Q80VI1 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trim56Q80VI1 Mir450b-201ENSMUST00000102095 82 ntBASIC2.53□□□□□ -2
Trim56Q80VI1 Gm22099-201ENSMUST00000157925 123 ntBASIC2.53□□□□□ -2
Trim56Q80VI1 Mir7009-201ENSMUST00000184519 64 ntBASIC2.53□□□□□ -2
Trim56Q80VI1 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.53□□□□□ -2
Trim56Q80VI1 CT033781.2-201ENSMUST00000221113 153 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 218.4 ms