Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm23722-201ENSMUST00000083002 130 ntBASIC1.98□□□□□ -2.09
Ddx55Q6ZPL9 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.98□□□□□ -2.09
Ddx55Q6ZPL9 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.97□□□□□ -2.09
Ddx55Q6ZPL9 Gm25915-201ENSMUST00000104265 126 ntBASIC1.97□□□□□ -2.09
Ddx55Q6ZPL9 Gm22105-201ENSMUST00000116734 116 ntBASIC1.97□□□□□ -2.09
Ddx55Q6ZPL9 Gm24366-201ENSMUST00000175383 86 ntBASIC1.97□□□□□ -2.09
Ddx55Q6ZPL9 Gm27326-201ENSMUST00000183504 95 ntBASIC1.97□□□□□ -2.09
Ddx55Q6ZPL9 Gm23947-201ENSMUST00000093636 107 ntBASIC1.97□□□□□ -2.09
Ddx55Q6ZPL9 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.96□□□□□ -2.1
Ddx55Q6ZPL9 Gm24984-201ENSMUST00000104454 133 ntBASIC1.96□□□□□ -2.1
Ddx55Q6ZPL9 Gm23172-201ENSMUST00000157160 124 ntBASIC1.96□□□□□ -2.1
Ddx55Q6ZPL9 Gm25425-201ENSMUST00000157611 96 ntBASIC1.96□□□□□ -2.1
Ddx55Q6ZPL9 Gm23208-201ENSMUST00000158666 127 ntBASIC1.96□□□□□ -2.1
Ddx55Q6ZPL9 Gm24656-201ENSMUST00000177548 132 ntBASIC1.96□□□□□ -2.1
Ddx55Q6ZPL9 Mir7039-201ENSMUST00000183852 85 ntBASIC1.96□□□□□ -2.1
Ddx55Q6ZPL9 Mir3969-201ENSMUST00000197106 92 ntBASIC1.96□□□□□ -2.1
Ddx55Q6ZPL9 Gm44976-201ENSMUST00000205543 261 ntBASIC1.96□□□□□ -2.1
Ddx55Q6ZPL9 Mir201-201ENSMUST00000083470 66 ntBASIC1.96□□□□□ -2.1
Ddx55Q6ZPL9 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Ddx55Q6ZPL9 Gm25090-201ENSMUST00000104000 132 ntBASIC1.95□□□□□ -2.1
Ddx55Q6ZPL9 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.95□□□□□ -2.1
Ddx55Q6ZPL9 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.95□□□□□ -2.1
Ddx55Q6ZPL9 Gm26291-201ENSMUST00000158889 137 ntBASIC1.95□□□□□ -2.1
Ddx55Q6ZPL9 Gm25730-201ENSMUST00000178753 165 ntBASIC1.95□□□□□ -2.1
Ddx55Q6ZPL9 Mir6995-201ENSMUST00000183658 71 ntBASIC1.95□□□□□ -2.1
Ddx55Q6ZPL9 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.95□□□□□ -2.1
Ddx55Q6ZPL9 Gm8219-201ENSMUST00000218309 242 ntBASIC1.95□□□□□ -2.1
Ddx55Q6ZPL9 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.95□□□□□ -2.1
Ddx55Q6ZPL9 Gm23239-201ENSMUST00000083006 181 ntBASIC1.95□□□□□ -2.1
Ddx55Q6ZPL9 Gm22743-201ENSMUST00000083445 133 ntBASIC1.95□□□□□ -2.1
Ddx55Q6ZPL9 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.95□□□□□ -2.1
Ddx55Q6ZPL9 Gm25882-201ENSMUST00000157784 85 ntBASIC1.94□□□□□ -2.1
Ddx55Q6ZPL9 Gm23181-201ENSMUST00000158685 110 ntBASIC1.94□□□□□ -2.1
Ddx55Q6ZPL9 Gm22665-201ENSMUST00000158720 275 ntBASIC1.94□□□□□ -2.1
Ddx55Q6ZPL9 Gm25364-201ENSMUST00000158851 107 ntBASIC1.94□□□□□ -2.1
Ddx55Q6ZPL9 Gm29613-201ENSMUST00000185846 313 ntBASIC1.94□□□□□ -2.1
Ddx55Q6ZPL9 Gm29544-201ENSMUST00000188860 313 ntBASIC1.94□□□□□ -2.1
Ddx55Q6ZPL9 Gm28808-201ENSMUST00000190978 313 ntBASIC1.94□□□□□ -2.1
Ddx55Q6ZPL9 Gm43381-201ENSMUST00000198553 165 ntBASIC1.94□□□□□ -2.1
Ddx55Q6ZPL9 Gm44470-201ENSMUST00000203913 142 ntBASIC1.94□□□□□ -2.1
Ddx55Q6ZPL9 Gm45544-201ENSMUST00000211130 88 ntBASIC1.94□□□□□ -2.1
Ddx55Q6ZPL9 Gm24805-201ENSMUST00000082931 104 ntBASIC1.94□□□□□ -2.1
Ddx55Q6ZPL9 Mir320-201ENSMUST00000083594 82 ntBASIC1.94□□□□□ -2.1
Ddx55Q6ZPL9 Gm25980-201ENSMUST00000157176 218 ntBASIC1.93□□□□□ -2.1
Ddx55Q6ZPL9 Gm26181-201ENSMUST00000157687 106 ntBASIC1.93□□□□□ -2.1
Ddx55Q6ZPL9 Gm24000-201ENSMUST00000158063 89 ntBASIC1.93□□□□□ -2.1
Ddx55Q6ZPL9 Gm18665-201ENSMUST00000189783 270 ntBASIC1.93□□□□□ -2.1
Ddx55Q6ZPL9 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.93□□□□□ -2.1
Ddx55Q6ZPL9 Gm25588-201ENSMUST00000082501 140 ntBASIC1.93□□□□□ -2.1
Ddx55Q6ZPL9 Gm22283-201ENSMUST00000082556 161 ntBASIC1.93□□□□□ -2.1
Ddx55Q6ZPL9 Gm10172-201ENSMUST00000085929 558 ntBASIC1.93□□□□□ -2.1
Ddx55Q6ZPL9 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Ddx55Q6ZPL9 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Ddx55Q6ZPL9 Snord90-201ENSMUST00000104568 111 ntBASIC1.92□□□□□ -2.1
Ddx55Q6ZPL9 Gm14709-201ENSMUST00000121225 304 ntBASIC1.92□□□□□ -2.1
Ddx55Q6ZPL9 Gm26415-201ENSMUST00000157673 292 ntBASIC1.92□□□□□ -2.1
Ddx55Q6ZPL9 Gm25771-201ENSMUST00000158565 144 ntBASIC1.92□□□□□ -2.1
Ddx55Q6ZPL9 Gm22888-201ENSMUST00000158640 77 ntBASIC1.92□□□□□ -2.1
Ddx55Q6ZPL9 Gm44358-201ENSMUST00000196301 98 ntBASIC1.92□□□□□ -2.1
Ddx55Q6ZPL9 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.92□□□□□ -2.1
Ddx55Q6ZPL9 Mir669b-201ENSMUST00000102172 97 ntBASIC1.91□□□□□ -2.1
Ddx55Q6ZPL9 Gm15692-201ENSMUST00000152173 352 ntBASIC1.91□□□□□ -2.1
Ddx55Q6ZPL9 Gm24345-201ENSMUST00000158706 124 ntBASIC1.91□□□□□ -2.1
Ddx55Q6ZPL9 Gm25750-201ENSMUST00000175483 112 ntBASIC1.91□□□□□ -2.1
Ddx55Q6ZPL9 Gm26337-201ENSMUST00000178000 79 ntBASIC1.91□□□□□ -2.1
Ddx55Q6ZPL9 Gm43911-201ENSMUST00000203097 76 ntBASIC1.91□□□□□ -2.1
Ddx55Q6ZPL9 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.91□□□□□ -2.1
Ddx55Q6ZPL9 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.91□□□□□ -2.1
Ddx55Q6ZPL9 BC022960-201ENSMUST00000119987 1815 ntBASIC1.9□□□□□ -2.11
Ddx55Q6ZPL9 Mir466b-3-201ENSMUST00000103806 81 ntBASIC1.9□□□□□ -2.11
Ddx55Q6ZPL9 Gm11856-201ENSMUST00000118712 276 ntBASIC1.9□□□□□ -2.11
Ddx55Q6ZPL9 Gm27894-201ENSMUST00000184177 92 ntBASIC1.9□□□□□ -2.11
Ddx55Q6ZPL9 Mir6950-201ENSMUST00000184438 73 ntBASIC1.9□□□□□ -2.11
Ddx55Q6ZPL9 Mir7665-201ENSMUST00000184907 63 ntBASIC1.9□□□□□ -2.11
Ddx55Q6ZPL9 Gm28383-201ENSMUST00000187563 139 ntBASIC1.9□□□□□ -2.11
Ddx55Q6ZPL9 Gm25855-201ENSMUST00000082787 72 ntBASIC1.9□□□□□ -2.11
Ddx55Q6ZPL9 Snord61-201ENSMUST00000083176 71 ntBASIC1.9□□□□□ -2.11
Ddx55Q6ZPL9 Mir880-201ENSMUST00000104809 78 ntBASIC1.89□□□□□ -2.11
Ddx55Q6ZPL9 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC1.89□□□□□ -2.11
Ddx55Q6ZPL9 Gm22790-201ENSMUST00000157229 129 ntBASIC1.89□□□□□ -2.11
Ddx55Q6ZPL9 Gm24572-201ENSMUST00000175505 88 ntBASIC1.89□□□□□ -2.11
Ddx55Q6ZPL9 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ddx55Q6ZPL9 Gm15115-201ENSMUST00000121145 264 ntBASIC1.88□□□□□ -2.11
Ddx55Q6ZPL9 Gm22384-201ENSMUST00000158187 104 ntBASIC1.88□□□□□ -2.11
Ddx55Q6ZPL9 Gm23922-201ENSMUST00000178792 79 ntBASIC1.88□□□□□ -2.11
Ddx55Q6ZPL9 Gm21885-201ENSMUST00000178891 327 ntBASIC1.88□□□□□ -2.11
Ddx55Q6ZPL9 Gm24657-201ENSMUST00000180085 79 ntBASIC1.88□□□□□ -2.11
Ddx55Q6ZPL9 Gm22996-201ENSMUST00000180236 79 ntBASIC1.88□□□□□ -2.11
Ddx55Q6ZPL9 Mir6379-201ENSMUST00000183392 115 ntBASIC1.88□□□□□ -2.11
Ddx55Q6ZPL9 Gm27851-201ENSMUST00000183529 63 ntBASIC1.88□□□□□ -2.11
Ddx55Q6ZPL9 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.88□□□□□ -2.11
Ddx55Q6ZPL9 AC164561.1-201ENSMUST00000220414 115 ntBASIC1.88□□□□□ -2.11
Ddx55Q6ZPL9 Gm23100-201ENSMUST00000083455 141 ntBASIC1.88□□□□□ -2.11
Ddx55Q6ZPL9 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.88□□□□□ -2.11
Ddx55Q6ZPL9 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ddx55Q6ZPL9 Gm23060-201ENSMUST00000102345 109 ntBASIC1.87□□□□□ -2.11
Ddx55Q6ZPL9 Gm14674-201ENSMUST00000117816 342 ntBASIC1.87□□□□□ -2.11
Ddx55Q6ZPL9 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.87□□□□□ -2.11
Ddx55Q6ZPL9 Gm26073-201ENSMUST00000179906 127 ntBASIC1.87□□□□□ -2.11
Ddx55Q6ZPL9 Gm27517-201ENSMUST00000184347 236 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 282.1 ms