Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Mir7050-201ENSMUST00000184636 60 ntBASIC1.76□□□□□ -2.13
Rnf220Q6PDX6 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.76□□□□□ -2.13
Rnf220Q6PDX6 Snord1a-201ENSMUST00000083160 74 ntBASIC1.76□□□□□ -2.13
Rnf220Q6PDX6 Gm22576-201ENSMUST00000083733 104 ntBASIC1.76□□□□□ -2.13
Rnf220Q6PDX6 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.75□□□□□ -2.13
Rnf220Q6PDX6 Gm14502-201ENSMUST00000118154 113 ntBASIC1.75□□□□□ -2.13
Rnf220Q6PDX6 Gm26038-201ENSMUST00000158151 106 ntBASIC1.75□□□□□ -2.13
Rnf220Q6PDX6 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Rnf220Q6PDX6 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC1.75□□□□□ -2.13
Rnf220Q6PDX6 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.75□□□□□ -2.13
Rnf220Q6PDX6 Gm10172-201ENSMUST00000085929 558 ntBASIC1.75□□□□□ -2.13
Rnf220Q6PDX6 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Rnf220Q6PDX6 BC022960-201ENSMUST00000119987 1815 ntBASIC1.75□□□□□ -2.13
Rnf220Q6PDX6 Mir654-201ENSMUST00000104787 84 ntBASIC1.74□□□□□ -2.13
Rnf220Q6PDX6 Gm24262-201ENSMUST00000157431 144 ntBASIC1.74□□□□□ -2.13
Rnf220Q6PDX6 Gm26345-201ENSMUST00000157534 120 ntBASIC1.74□□□□□ -2.13
Rnf220Q6PDX6 Gm25071-201ENSMUST00000175232 70 ntBASIC1.74□□□□□ -2.13
Rnf220Q6PDX6 Gm44477-201ENSMUST00000199661 110 ntBASIC1.74□□□□□ -2.13
Rnf220Q6PDX6 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.74□□□□□ -2.13
Rnf220Q6PDX6 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.74□□□□□ -2.13
Rnf220Q6PDX6 Snord7-201ENSMUST00000083781 97 ntBASIC1.74□□□□□ -2.13
Rnf220Q6PDX6 Mir669b-201ENSMUST00000102172 97 ntBASIC1.73□□□□□ -2.13
Rnf220Q6PDX6 Gm25529-201ENSMUST00000104850 92 ntBASIC1.73□□□□□ -2.13
Rnf220Q6PDX6 Mir873a-201ENSMUST00000104863 77 ntBASIC1.73□□□□□ -2.13
Rnf220Q6PDX6 Gm23350-201ENSMUST00000158429 103 ntBASIC1.73□□□□□ -2.13
Rnf220Q6PDX6 Gm27399-201ENSMUST00000184250 78 ntBASIC1.73□□□□□ -2.13
Rnf220Q6PDX6 Gm27443-201ENSMUST00000184660 98 ntBASIC1.73□□□□□ -2.13
Rnf220Q6PDX6 Gm44859-201ENSMUST00000207831 94 ntBASIC1.73□□□□□ -2.13
Rnf220Q6PDX6 Gm23722-201ENSMUST00000083002 130 ntBASIC1.73□□□□□ -2.13
Rnf220Q6PDX6 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Rnf220Q6PDX6 Gm24478-201ENSMUST00000157439 158 ntBASIC1.72□□□□□ -2.13
Rnf220Q6PDX6 Gm24880-201ENSMUST00000158776 85 ntBASIC1.72□□□□□ -2.13
Rnf220Q6PDX6 Gm22802-201ENSMUST00000175621 89 ntBASIC1.72□□□□□ -2.13
Rnf220Q6PDX6 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.72□□□□□ -2.13
Rnf220Q6PDX6 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.72□□□□□ -2.13
Rnf220Q6PDX6 Gm25541-201ENSMUST00000116888 126 ntBASIC1.71□□□□□ -2.14
Rnf220Q6PDX6 Gm16328-201ENSMUST00000126985 196 ntBASIC1.71□□□□□ -2.14
Rnf220Q6PDX6 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC1.71□□□□□ -2.14
Rnf220Q6PDX6 Gm22999-201ENSMUST00000157082 88 ntBASIC1.71□□□□□ -2.14
Rnf220Q6PDX6 Gm22099-201ENSMUST00000157925 123 ntBASIC1.71□□□□□ -2.14
Rnf220Q6PDX6 Gm23859-201ENSMUST00000158383 64 ntBASIC1.71□□□□□ -2.14
Rnf220Q6PDX6 Gm25838-201ENSMUST00000158920 120 ntBASIC1.71□□□□□ -2.14
Rnf220Q6PDX6 Gm25936-201ENSMUST00000179952 114 ntBASIC1.71□□□□□ -2.14
Rnf220Q6PDX6 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.71□□□□□ -2.14
Rnf220Q6PDX6 Gm26076-201ENSMUST00000104065 105 ntBASIC1.7□□□□□ -2.14
Rnf220Q6PDX6 Gm11644-201ENSMUST00000119735 150 ntBASIC1.7□□□□□ -2.14
Rnf220Q6PDX6 Gm12309-201ENSMUST00000119889 182 ntBASIC1.7□□□□□ -2.14
Rnf220Q6PDX6 Gm23106-201ENSMUST00000157554 101 ntBASIC1.7□□□□□ -2.14
Rnf220Q6PDX6 Gm24222-201ENSMUST00000158834 93 ntBASIC1.7□□□□□ -2.14
Rnf220Q6PDX6 Gm14923-201ENSMUST00000118270 155 ntBASIC1.69□□□□□ -2.14
Rnf220Q6PDX6 Gm15536-201ENSMUST00000121411 114 ntBASIC1.69□□□□□ -2.14
Rnf220Q6PDX6 Gm24747-201ENSMUST00000157835 87 ntBASIC1.69□□□□□ -2.14
Rnf220Q6PDX6 Gm22164-201ENSMUST00000158413 106 ntBASIC1.69□□□□□ -2.14
Rnf220Q6PDX6 Gm22200-201ENSMUST00000158614 67 ntBASIC1.69□□□□□ -2.14
Rnf220Q6PDX6 Gm22666-201ENSMUST00000158717 164 ntBASIC1.69□□□□□ -2.14
Rnf220Q6PDX6 Mir6351-201ENSMUST00000183826 99 ntBASIC1.69□□□□□ -2.14
Rnf220Q6PDX6 Mir6901-201ENSMUST00000185062 62 ntBASIC1.69□□□□□ -2.14
Rnf220Q6PDX6 Gm44470-201ENSMUST00000203913 142 ntBASIC1.69□□□□□ -2.14
Rnf220Q6PDX6 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.69□□□□□ -2.14
Rnf220Q6PDX6 Gm23303-201ENSMUST00000082714 152 ntBASIC1.69□□□□□ -2.14
Rnf220Q6PDX6 Gm24494-201ENSMUST00000083804 81 ntBASIC1.69□□□□□ -2.14
Rnf220Q6PDX6 Mir653-201ENSMUST00000102402 85 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Mir344e-201ENSMUST00000104677 66 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Gm23551-201ENSMUST00000116852 121 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Gm12941-201ENSMUST00000117934 220 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Gm24250-201ENSMUST00000157320 135 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Gm22079-201ENSMUST00000157592 106 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Gm26291-201ENSMUST00000158889 137 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Gm16539-201ENSMUST00000160086 327 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Gm23770-201ENSMUST00000178009 108 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Gm22832-201ENSMUST00000178022 108 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Gm23863-201ENSMUST00000178265 108 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Gm24828-201ENSMUST00000178507 108 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Gm23052-201ENSMUST00000178633 108 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Gm25729-201ENSMUST00000179050 108 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Gm25359-201ENSMUST00000179315 108 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Gm22624-201ENSMUST00000179913 108 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Mir7068-201ENSMUST00000183439 74 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Gm24461-201ENSMUST00000082735 103 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Gm23239-201ENSMUST00000083006 181 ntBASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Rnf220Q6PDX6 Gm26342-201ENSMUST00000104557 129 ntBASIC1.67□□□□□ -2.14
Rnf220Q6PDX6 Gm25428-201ENSMUST00000157608 114 ntBASIC1.67□□□□□ -2.14
Rnf220Q6PDX6 Snora24-201ENSMUST00000174989 130 ntBASIC1.67□□□□□ -2.14
Rnf220Q6PDX6 Gm25642-201ENSMUST00000175137 66 ntBASIC1.67□□□□□ -2.14
Rnf220Q6PDX6 Mir7014-201ENSMUST00000183853 63 ntBASIC1.67□□□□□ -2.14
Rnf220Q6PDX6 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.67□□□□□ -2.14
Rnf220Q6PDX6 Gm22664-201ENSMUST00000158719 105 ntBASIC1.66□□□□□ -2.14
Rnf220Q6PDX6 Mir5118-201ENSMUST00000175551 67 ntBASIC1.66□□□□□ -2.14
Rnf220Q6PDX6 Gm26337-201ENSMUST00000178000 79 ntBASIC1.66□□□□□ -2.14
Rnf220Q6PDX6 Gm27792-201ENSMUST00000184031 115 ntBASIC1.66□□□□□ -2.14
Rnf220Q6PDX6 Mir7241-201ENSMUST00000184532 64 ntBASIC1.66□□□□□ -2.14
Rnf220Q6PDX6 Gm28862-201ENSMUST00000188246 163 ntBASIC1.66□□□□□ -2.14
Rnf220Q6PDX6 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.66□□□□□ -2.14
Rnf220Q6PDX6 AC124739.2-201ENSMUST00000222201 109 ntBASIC1.66□□□□□ -2.14
Rnf220Q6PDX6 Gm23445-201ENSMUST00000082800 107 ntBASIC1.66□□□□□ -2.14
Rnf220Q6PDX6 Gm25650-201ENSMUST00000083784 162 ntBASIC1.66□□□□□ -2.14
Rnf220Q6PDX6 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 785 ms