Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm25642-201ENSMUST00000175137 66 ntBASIC2.69□□□□□ -1.98
Rnf43Q5NCP0 Gm27446-201ENSMUST00000183963 89 ntBASIC2.69□□□□□ -1.98
Rnf43Q5NCP0 Mir6928-201ENSMUST00000185166 70 ntBASIC2.69□□□□□ -1.98
Rnf43Q5NCP0 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.68□□□□□ -1.98
Rnf43Q5NCP0 Gm23349-201ENSMUST00000158432 98 ntBASIC2.68□□□□□ -1.98
Rnf43Q5NCP0 Gm25769-201ENSMUST00000158569 127 ntBASIC2.68□□□□□ -1.98
Rnf43Q5NCP0 Gm22416-201ENSMUST00000158590 88 ntBASIC2.68□□□□□ -1.98
Rnf43Q5NCP0 Gm25119-201ENSMUST00000158815 88 ntBASIC2.68□□□□□ -1.98
Rnf43Q5NCP0 Gm19257-201ENSMUST00000186121 183 ntBASIC2.68□□□□□ -1.98
Rnf43Q5NCP0 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.68□□□□□ -1.98
Rnf43Q5NCP0 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.68□□□□□ -1.98
Rnf43Q5NCP0 Gm25610-201ENSMUST00000104016 129 ntBASIC2.67□□□□□ -1.98
Rnf43Q5NCP0 Gm22545-201ENSMUST00000104350 132 ntBASIC2.67□□□□□ -1.98
Rnf43Q5NCP0 Gm23390-201ENSMUST00000157393 106 ntBASIC2.67□□□□□ -1.98
Rnf43Q5NCP0 Gm22338-201ENSMUST00000157715 129 ntBASIC2.67□□□□□ -1.98
Rnf43Q5NCP0 Gm27786-201ENSMUST00000184337 70 ntBASIC2.67□□□□□ -1.98
Rnf43Q5NCP0 AC122327.1-201ENSMUST00000220778 108 ntBASIC2.67□□□□□ -1.98
Rnf43Q5NCP0 Gm6109-201ENSMUST00000223297 348 ntBASIC2.67□□□□□ -1.98
Rnf43Q5NCP0 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.67□□□□□ -1.98
Rnf43Q5NCP0 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.66□□□□□ -1.98
Rnf43Q5NCP0 AC153950.1-201ENSMUST00000219916 3238 ntBASIC2.66□□□□□ -1.98
Rnf43Q5NCP0 Gm26345-201ENSMUST00000157534 120 ntBASIC2.66□□□□□ -1.98
Rnf43Q5NCP0 Gm23223-201ENSMUST00000158119 127 ntBASIC2.66□□□□□ -1.98
Rnf43Q5NCP0 Gm24946-201ENSMUST00000158332 106 ntBASIC2.66□□□□□ -1.98
Rnf43Q5NCP0 Mir301-201ENSMUST00000083655 86 ntBASIC2.66□□□□□ -1.98
Rnf43Q5NCP0 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.66□□□□□ -1.98
Rnf43Q5NCP0 Gm24670-201ENSMUST00000104154 132 ntBASIC2.65□□□□□ -1.99
Rnf43Q5NCP0 Gm26341-201ENSMUST00000104561 134 ntBASIC2.65□□□□□ -1.99
Rnf43Q5NCP0 Gm14671-201ENSMUST00000121790 262 ntBASIC2.65□□□□□ -1.99
Rnf43Q5NCP0 Gm23384-201ENSMUST00000158593 103 ntBASIC2.65□□□□□ -1.99
Rnf43Q5NCP0 Snora41-201ENSMUST00000082668 132 ntBASIC2.65□□□□□ -1.99
Rnf43Q5NCP0 Gm24038-201ENSMUST00000082872 159 ntBASIC2.65□□□□□ -1.99
Rnf43Q5NCP0 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.64□□□□□ -1.99
Rnf43Q5NCP0 Gm22067-201ENSMUST00000122790 107 ntBASIC2.64□□□□□ -1.99
Rnf43Q5NCP0 Gm22279-201ENSMUST00000157200 93 ntBASIC2.64□□□□□ -1.99
Rnf43Q5NCP0 Gm27959-201ENSMUST00000185172 111 ntBASIC2.64□□□□□ -1.99
Rnf43Q5NCP0 Gm44903-201ENSMUST00000206840 130 ntBASIC2.64□□□□□ -1.99
Rnf43Q5NCP0 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.64□□□□□ -1.99
Rnf43Q5NCP0 Mir429-201ENSMUST00000083493 83 ntBASIC2.64□□□□□ -1.99
Rnf43Q5NCP0 Gm45265-201ENSMUST00000210852 2497 ntBASIC2.64□□□□□ -1.99
Rnf43Q5NCP0 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Rnf43Q5NCP0 Gm11792-201ENSMUST00000120640 168 ntBASIC2.63□□□□□ -1.99
Rnf43Q5NCP0 Gm24250-201ENSMUST00000157320 135 ntBASIC2.63□□□□□ -1.99
Rnf43Q5NCP0 Gm22651-201ENSMUST00000157872 94 ntBASIC2.63□□□□□ -1.99
Rnf43Q5NCP0 Gm22330-201ENSMUST00000158068 115 ntBASIC2.63□□□□□ -1.99
Rnf43Q5NCP0 Gm23854-201ENSMUST00000158378 108 ntBASIC2.63□□□□□ -1.99
Rnf43Q5NCP0 Mir1931-201ENSMUST00000158589 119 ntBASIC2.63□□□□□ -1.99
Rnf43Q5NCP0 Snord53-201ENSMUST00000175146 78 ntBASIC2.63□□□□□ -1.99
Rnf43Q5NCP0 Gm23770-201ENSMUST00000178009 108 ntBASIC2.63□□□□□ -1.99
Rnf43Q5NCP0 Gm22832-201ENSMUST00000178022 108 ntBASIC2.63□□□□□ -1.99
Rnf43Q5NCP0 Gm23863-201ENSMUST00000178265 108 ntBASIC2.63□□□□□ -1.99
Rnf43Q5NCP0 Gm24828-201ENSMUST00000178507 108 ntBASIC2.63□□□□□ -1.99
Rnf43Q5NCP0 Gm23052-201ENSMUST00000178633 108 ntBASIC2.63□□□□□ -1.99
Rnf43Q5NCP0 Gm25729-201ENSMUST00000179050 108 ntBASIC2.63□□□□□ -1.99
Rnf43Q5NCP0 Gm25359-201ENSMUST00000179315 108 ntBASIC2.63□□□□□ -1.99
Rnf43Q5NCP0 Gm22624-201ENSMUST00000179913 108 ntBASIC2.63□□□□□ -1.99
Rnf43Q5NCP0 Gm25680-201ENSMUST00000116917 126 ntBASIC2.62□□□□□ -1.99
Rnf43Q5NCP0 Gm22635-201ENSMUST00000116962 126 ntBASIC2.62□□□□□ -1.99
Rnf43Q5NCP0 Gm23083-201ENSMUST00000157851 116 ntBASIC2.62□□□□□ -1.99
Rnf43Q5NCP0 Gm22963-201ENSMUST00000157960 91 ntBASIC2.62□□□□□ -1.99
Rnf43Q5NCP0 Gm22332-201ENSMUST00000158072 126 ntBASIC2.62□□□□□ -1.99
Rnf43Q5NCP0 Mir6377-201ENSMUST00000183760 114 ntBASIC2.62□□□□□ -1.99
Rnf43Q5NCP0 AC166341.8-201ENSMUST00000221267 108 ntBASIC2.62□□□□□ -1.99
Rnf43Q5NCP0 Gm24524-201ENSMUST00000082925 170 ntBASIC2.62□□□□□ -1.99
Rnf43Q5NCP0 Mir34a-201ENSMUST00000083559 102 ntBASIC2.62□□□□□ -1.99
Rnf43Q5NCP0 Gm25627-201ENSMUST00000084003 153 ntBASIC2.62□□□□□ -1.99
Rnf43Q5NCP0 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
Rnf43Q5NCP0 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Rnf43Q5NCP0 Gm25090-201ENSMUST00000104000 132 ntBASIC2.61□□□□□ -1.99
Rnf43Q5NCP0 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.61□□□□□ -1.99
Rnf43Q5NCP0 Gm27365-201ENSMUST00000184041 177 ntBASIC2.61□□□□□ -1.99
Rnf43Q5NCP0 Gm24261-201ENSMUST00000083744 104 ntBASIC2.61□□□□□ -1.99
Rnf43Q5NCP0 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Rnf43Q5NCP0 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.6□□□□□ -1.99
Rnf43Q5NCP0 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Rnf43Q5NCP0 Gm24049-201ENSMUST00000102409 100 ntBASIC2.6□□□□□ -1.99
Rnf43Q5NCP0 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Rnf43Q5NCP0 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.6□□□□□ -1.99
Rnf43Q5NCP0 Gm22387-201ENSMUST00000158191 131 ntBASIC2.6□□□□□ -1.99
Rnf43Q5NCP0 Gm24210-201ENSMUST00000158263 133 ntBASIC2.6□□□□□ -1.99
Rnf43Q5NCP0 Mir6386-201ENSMUST00000183558 104 ntBASIC2.6□□□□□ -1.99
Rnf43Q5NCP0 Gm27369-201ENSMUST00000185182 71 ntBASIC2.6□□□□□ -1.99
Rnf43Q5NCP0 Mir6925-201ENSMUST00000197857 70 ntBASIC2.6□□□□□ -1.99
Rnf43Q5NCP0 Gm42960-201ENSMUST00000202160 241 ntBASIC2.6□□□□□ -1.99
Rnf43Q5NCP0 Gm43977-201ENSMUST00000203970 189 ntBASIC2.6□□□□□ -1.99
Rnf43Q5NCP0 Gm24203-201ENSMUST00000082949 114 ntBASIC2.6□□□□□ -1.99
Rnf43Q5NCP0 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.6□□□□□ -1.99
Rnf43Q5NCP0 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.59□□□□□ -1.99
Rnf43Q5NCP0 Gm14937-201ENSMUST00000119709 208 ntBASIC2.59□□□□□ -1.99
Rnf43Q5NCP0 Gm23601-201ENSMUST00000157259 131 ntBASIC2.59□□□□□ -1.99
Rnf43Q5NCP0 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.59□□□□□ -1.99
Rnf43Q5NCP0 Gm18346-201ENSMUST00000216782 325 ntBASIC2.59□□□□□ -1.99
Rnf43Q5NCP0 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Rnf43Q5NCP0 Gm24649-201ENSMUST00000157106 134 ntBASIC2.58□□□□□ -2
Rnf43Q5NCP0 Gm23261-201ENSMUST00000158316 136 ntBASIC2.58□□□□□ -2
Rnf43Q5NCP0 Gm22768-201ENSMUST00000158366 153 ntBASIC2.58□□□□□ -2
Rnf43Q5NCP0 Mir6353-201ENSMUST00000183596 113 ntBASIC2.58□□□□□ -2
Rnf43Q5NCP0 AC158598.2-201ENSMUST00000213397 3832 ntBASIC2.58□□□□□ -2
Rnf43Q5NCP0 Snora33-201ENSMUST00000093556 129 ntBASIC2.58□□□□□ -2
Rnf43Q5NCP0 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 188.9 ms