Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm29658-201ENSMUST00000185404 230 ntBASIC2.79□□□□□ -1.96
Col18a1P39061 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.79□□□□□ -1.96
Col18a1P39061 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Col18a1P39061 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Col18a1P39061 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Col18a1P39061 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Col18a1P39061 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Col18a1P39061 Gm24126-201ENSMUST00000104111 106 ntBASIC2.78□□□□□ -1.96
Col18a1P39061 Gm23986-201ENSMUST00000157144 63 ntBASIC2.78□□□□□ -1.96
Col18a1P39061 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
Col18a1P39061 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.78□□□□□ -1.96
Col18a1P39061 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Col18a1P39061 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Col18a1P39061 Gm26080-201ENSMUST00000104069 131 ntBASIC2.77□□□□□ -1.97
Col18a1P39061 Gm25061-201ENSMUST00000104665 107 ntBASIC2.77□□□□□ -1.97
Col18a1P39061 Gm14884-201ENSMUST00000120456 196 ntBASIC2.77□□□□□ -1.97
Col18a1P39061 Gm22522-201ENSMUST00000158271 151 ntBASIC2.77□□□□□ -1.97
Col18a1P39061 Gm25606-201ENSMUST00000158363 95 ntBASIC2.77□□□□□ -1.97
Col18a1P39061 Mir3068-202ENSMUST00000197755 79 ntBASIC2.77□□□□□ -1.97
Col18a1P39061 Gm26441-201ENSMUST00000082590 104 ntBASIC2.77□□□□□ -1.97
Col18a1P39061 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.77□□□□□ -1.97
Col18a1P39061 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Col18a1P39061 Gm14709-201ENSMUST00000121225 304 ntBASIC2.77□□□□□ -1.97
Col18a1P39061 Mir6370-201ENSMUST00000183510 120 ntBASIC2.77□□□□□ -1.97
Col18a1P39061 Mir6353-201ENSMUST00000183596 113 ntBASIC2.77□□□□□ -1.97
Col18a1P39061 Gm27446-201ENSMUST00000183963 89 ntBASIC2.77□□□□□ -1.97
Col18a1P39061 Gm44921-201ENSMUST00000205290 301 ntBASIC2.77□□□□□ -1.97
Col18a1P39061 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.77□□□□□ -1.97
Col18a1P39061 Snora33-201ENSMUST00000093556 129 ntBASIC2.77□□□□□ -1.97
Col18a1P39061 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
Col18a1P39061 Gm13246-201ENSMUST00000120994 315 ntBASIC2.76□□□□□ -1.97
Col18a1P39061 Gm24388-201ENSMUST00000177872 107 ntBASIC2.76□□□□□ -1.97
Col18a1P39061 Gm9156-201ENSMUST00000189660 463 ntBASIC2.76□□□□□ -1.97
Col18a1P39061 Gm43626-201ENSMUST00000198575 162 ntBASIC2.76□□□□□ -1.97
Col18a1P39061 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.76□□□□□ -1.97
Col18a1P39061 AC132833.2-201ENSMUST00000228699 157 ntBASIC2.76□□□□□ -1.97
Col18a1P39061 Gm22458-201ENSMUST00000082576 107 ntBASIC2.76□□□□□ -1.97
Col18a1P39061 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.76□□□□□ -1.97
Col18a1P39061 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Col18a1P39061 Gm26074-201ENSMUST00000104063 129 ntBASIC2.75□□□□□ -1.97
Col18a1P39061 Gm25878-201ENSMUST00000104327 93 ntBASIC2.75□□□□□ -1.97
Col18a1P39061 Gm23152-201ENSMUST00000175322 116 ntBASIC2.75□□□□□ -1.97
Col18a1P39061 Gm27580-201ENSMUST00000183666 149 ntBASIC2.75□□□□□ -1.97
Col18a1P39061 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.75□□□□□ -1.97
Col18a1P39061 Gm22443-201ENSMUST00000082890 107 ntBASIC2.75□□□□□ -1.97
Col18a1P39061 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Col18a1P39061 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC2.74□□□□□ -1.97
Col18a1P39061 Gm25625-201ENSMUST00000157221 96 ntBASIC2.74□□□□□ -1.97
Col18a1P39061 Gm22561-201ENSMUST00000157331 84 ntBASIC2.74□□□□□ -1.97
Col18a1P39061 Gm25059-201ENSMUST00000157367 117 ntBASIC2.74□□□□□ -1.97
Col18a1P39061 Gm23342-201ENSMUST00000158958 115 ntBASIC2.74□□□□□ -1.97
Col18a1P39061 Gm24801-201ENSMUST00000178503 105 ntBASIC2.74□□□□□ -1.97
Col18a1P39061 Gm27326-201ENSMUST00000183504 95 ntBASIC2.74□□□□□ -1.97
Col18a1P39061 Gm44464-201ENSMUST00000198010 138 ntBASIC2.74□□□□□ -1.97
Col18a1P39061 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.74□□□□□ -1.97
Col18a1P39061 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col18a1P39061 Gm23785-201ENSMUST00000116741 96 ntBASIC2.73□□□□□ -1.97
Col18a1P39061 Gm14882-201ENSMUST00000117216 218 ntBASIC2.73□□□□□ -1.97
Col18a1P39061 Mir8119-201ENSMUST00000183371 129 ntBASIC2.73□□□□□ -1.97
Col18a1P39061 Snora41-201ENSMUST00000082668 132 ntBASIC2.73□□□□□ -1.97
Col18a1P39061 Gm26109-201ENSMUST00000083970 70 ntBASIC2.73□□□□□ -1.97
Col18a1P39061 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col18a1P39061 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC2.72□□□□□ -1.97
Col18a1P39061 Gm22193-201ENSMUST00000116868 76 ntBASIC2.72□□□□□ -1.97
Col18a1P39061 Gm24649-201ENSMUST00000157106 134 ntBASIC2.72□□□□□ -1.97
Col18a1P39061 Gm24900-201ENSMUST00000158128 134 ntBASIC2.72□□□□□ -1.97
Col18a1P39061 Gm25769-201ENSMUST00000158569 127 ntBASIC2.72□□□□□ -1.97
Col18a1P39061 Gm24056-201ENSMUST00000158617 146 ntBASIC2.72□□□□□ -1.97
Col18a1P39061 Gm5900-201ENSMUST00000179862 375 ntBASIC2.72□□□□□ -1.97
Col18a1P39061 Mir6377-201ENSMUST00000183760 114 ntBASIC2.72□□□□□ -1.97
Col18a1P39061 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC2.72□□□□□ -1.97
Col18a1P39061 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.72□□□□□ -1.97
Col18a1P39061 Gm23838-201ENSMUST00000158067 162 ntBASIC2.72□□□□□ -1.97
Col18a1P39061 Gm22332-201ENSMUST00000158072 126 ntBASIC2.72□□□□□ -1.97
Col18a1P39061 Gm24769-201ENSMUST00000158506 129 ntBASIC2.72□□□□□ -1.97
Col18a1P39061 Gm23917-201ENSMUST00000175256 98 ntBASIC2.72□□□□□ -1.97
Col18a1P39061 Gm25229-201ENSMUST00000178587 79 ntBASIC2.72□□□□□ -1.97
Col18a1P39061 Gm26435-201ENSMUST00000179026 107 ntBASIC2.72□□□□□ -1.97
Col18a1P39061 n-R5s220-201ENSMUST00000082926 120 ntBASIC2.72□□□□□ -1.97
Col18a1P39061 Gm24805-201ENSMUST00000082931 104 ntBASIC2.72□□□□□ -1.97
Col18a1P39061 Gm25402-201ENSMUST00000082966 131 ntBASIC2.72□□□□□ -1.97
Col18a1P39061 Gm23850-201ENSMUST00000083830 169 ntBASIC2.72□□□□□ -1.97
Col18a1P39061 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Col18a1P39061 Gm3702-201ENSMUST00000211754 346 ntBASIC2.71□□□□□ -1.98
Col18a1P39061 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.71□□□□□ -1.98
Col18a1P39061 Gm24044-201ENSMUST00000083107 156 ntBASIC2.71□□□□□ -1.98
Col18a1P39061 Mir208a-201ENSMUST00000083498 83 ntBASIC2.71□□□□□ -1.98
Col18a1P39061 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.71□□□□□ -1.98
Col18a1P39061 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Col18a1P39061 Gm42448-201ENSMUST00000197122 2644 ntBASIC2.7□□□□□ -1.98
Col18a1P39061 Gm25680-201ENSMUST00000116917 126 ntBASIC2.7□□□□□ -1.98
Col18a1P39061 Gm22635-201ENSMUST00000116962 126 ntBASIC2.7□□□□□ -1.98
Col18a1P39061 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.7□□□□□ -1.98
Col18a1P39061 Gm16510-201ENSMUST00000153501 249 ntBASIC2.7□□□□□ -1.98
Col18a1P39061 Gm22706-201ENSMUST00000157907 112 ntBASIC2.7□□□□□ -1.98
Col18a1P39061 Gm22727-201ENSMUST00000158090 116 ntBASIC2.7□□□□□ -1.98
Col18a1P39061 Gm25976-201ENSMUST00000158695 130 ntBASIC2.7□□□□□ -1.98
Col18a1P39061 Gm24495-201ENSMUST00000178575 79 ntBASIC2.7□□□□□ -1.98
Col18a1P39061 Gm22253-201ENSMUST00000179870 79 ntBASIC2.7□□□□□ -1.98
Col18a1P39061 Mir6371-201ENSMUST00000184470 111 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 206.1 ms