Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 AC154282.1-201ENSMUST00000223154 265 ntBASIC-0.23□□□□□ -2.45
Sdc4O35988 AC154484.1-201ENSMUST00000227311 771 ntBASIC-0.23□□□□□ -2.45
Sdc4O35988 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.23□□□□□ -2.45
Sdc4O35988 Gm22598-201ENSMUST00000157600 127 ntBASIC-0.24□□□□□ -2.45
Sdc4O35988 Gm25444-201ENSMUST00000158999 113 ntBASIC-0.24□□□□□ -2.45
Sdc4O35988 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.24□□□□□ -2.45
Sdc4O35988 Gm26076-201ENSMUST00000104065 105 ntBASIC-0.25□□□□□ -2.45
Sdc4O35988 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.25□□□□□ -2.45
Sdc4O35988 Gm13720-201ENSMUST00000120741 196 ntBASIC-0.25□□□□□ -2.45
Sdc4O35988 Gm13341-201ENSMUST00000120780 672 ntBASIC-0.25□□□□□ -2.45
Sdc4O35988 Gm25494-201ENSMUST00000158143 100 ntBASIC-0.25□□□□□ -2.45
Sdc4O35988 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC-0.25□□□□□ -2.45
Sdc4O35988 Gm26400-201ENSMUST00000175012 85 ntBASIC-0.25□□□□□ -2.45
Sdc4O35988 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC-0.25□□□□□ -2.45
Sdc4O35988 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.25□□□□□ -2.45
Sdc4O35988 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.25□□□□□ -2.45
Sdc4O35988 Mir465d-201ENSMUST00000196314 58 ntBASIC-0.25□□□□□ -2.45
Sdc4O35988 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.25□□□□□ -2.45
Sdc4O35988 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC-0.25□□□□□ -2.45
Sdc4O35988 Gm29818-201ENSMUST00000218070 165 ntBASIC-0.25□□□□□ -2.45
Sdc4O35988 Gm23404-201ENSMUST00000082543 97 ntBASIC-0.25□□□□□ -2.45
Sdc4O35988 Gm23614-201ENSMUST00000082598 107 ntBASIC-0.25□□□□□ -2.45
Sdc4O35988 Gm24150-201ENSMUST00000082759 104 ntBASIC-0.25□□□□□ -2.45
Sdc4O35988 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.25□□□□□ -2.45
Sdc4O35988 Mir377-201ENSMUST00000083504 68 ntBASIC-0.25□□□□□ -2.45
Sdc4O35988 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.25□□□□□ -2.45
Sdc4O35988 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.25□□□□□ -2.45
Sdc4O35988 Gm26482-201ENSMUST00000158015 62 ntBASIC-0.26□□□□□ -2.45
Sdc4O35988 Cfap61-214ENSMUST00000167179 183 ntBASIC-0.26□□□□□ -2.45
Sdc4O35988 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-0.26□□□□□ -2.45
Sdc4O35988 AC115735.2-201ENSMUST00000227135 351 ntBASIC-0.26□□□□□ -2.45
Sdc4O35988 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.26□□□□□ -2.45
Sdc4O35988 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.26□□□□□ -2.45
Sdc4O35988 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.27□□□□□ -2.45
Sdc4O35988 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.27□□□□□ -2.45
Sdc4O35988 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.27□□□□□ -2.45
Sdc4O35988 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.27□□□□□ -2.45
Sdc4O35988 Gm26056-201ENSMUST00000083043 104 ntBASIC-0.27□□□□□ -2.45
Sdc4O35988 Gm22421-201ENSMUST00000083058 107 ntBASIC-0.27□□□□□ -2.45
Sdc4O35988 Gm24043-201ENSMUST00000083108 116 ntBASIC-0.27□□□□□ -2.45
Sdc4O35988 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.27□□□□□ -2.45
Sdc4O35988 Mir672-201ENSMUST00000102331 100 ntBASIC-0.28□□□□□ -2.45
Sdc4O35988 Gm23020-201ENSMUST00000158766 253 ntBASIC-0.28□□□□□ -2.45
Sdc4O35988 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.28□□□□□ -2.45
Sdc4O35988 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.28□□□□□ -2.45
Sdc4O35988 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.28□□□□□ -2.45
Sdc4O35988 Gm38183-201ENSMUST00000193189 205 ntBASIC-0.28□□□□□ -2.45
Sdc4O35988 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.28□□□□□ -2.45
Sdc4O35988 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.28□□□□□ -2.45
Sdc4O35988 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
Sdc4O35988 Snora19-201ENSMUST00000082962 132 ntBASIC-0.28□□□□□ -2.45
Sdc4O35988 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.28□□□□□ -2.45
Sdc4O35988 Gm23658-201ENSMUST00000083233 132 ntBASIC-0.28□□□□□ -2.45
Sdc4O35988 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.29□□□□□ -2.46
Sdc4O35988 Gm27755-201ENSMUST00000184623 132 ntBASIC-0.29□□□□□ -2.46
Sdc4O35988 Mir721-201ENSMUST00000200230 88 ntBASIC-0.29□□□□□ -2.46
Sdc4O35988 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-0.29□□□□□ -2.46
Sdc4O35988 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.29□□□□□ -2.46
Sdc4O35988 Mir18-201ENSMUST00000083469 96 ntBASIC-0.29□□□□□ -2.46
Sdc4O35988 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
Sdc4O35988 Gm23640-201ENSMUST00000157860 104 ntBASIC-0.3□□□□□ -2.46
Sdc4O35988 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.3□□□□□ -2.46
Sdc4O35988 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.3□□□□□ -2.46
Sdc4O35988 Gm22114-201ENSMUST00000177756 107 ntBASIC-0.3□□□□□ -2.46
Sdc4O35988 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.3□□□□□ -2.46
Sdc4O35988 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.31□□□□□ -2.46
Sdc4O35988 Gm14298-201ENSMUST00000139032 237 ntBASIC-0.31□□□□□ -2.46
Sdc4O35988 Gm24559-201ENSMUST00000157519 121 ntBASIC-0.31□□□□□ -2.46
Sdc4O35988 Gm22387-201ENSMUST00000158191 131 ntBASIC-0.31□□□□□ -2.46
Sdc4O35988 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.31□□□□□ -2.46
Sdc4O35988 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-0.31□□□□□ -2.46
Sdc4O35988 Gm27943-201ENSMUST00000184844 116 ntBASIC-0.31□□□□□ -2.46
Sdc4O35988 Gm38050-201ENSMUST00000191904 238 ntBASIC-0.31□□□□□ -2.46
Sdc4O35988 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.31□□□□□ -2.46
Sdc4O35988 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.31□□□□□ -2.46
Sdc4O35988 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
Sdc4O35988 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
Sdc4O35988 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.32□□□□□ -2.46
Sdc4O35988 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.32□□□□□ -2.46
Sdc4O35988 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.32□□□□□ -2.46
Sdc4O35988 Gm12647-201ENSMUST00000118977 265 ntBASIC-0.32□□□□□ -2.46
Sdc4O35988 Gm12771-201ENSMUST00000120246 135 ntBASIC-0.32□□□□□ -2.46
Sdc4O35988 Gm13246-201ENSMUST00000120994 315 ntBASIC-0.32□□□□□ -2.46
Sdc4O35988 Gm11834-201ENSMUST00000122257 585 ntBASIC-0.32□□□□□ -2.46
Sdc4O35988 Gm22199-201ENSMUST00000122660 126 ntBASIC-0.32□□□□□ -2.46
Sdc4O35988 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.32□□□□□ -2.46
Sdc4O35988 Gm22814-201ENSMUST00000157452 104 ntBASIC-0.32□□□□□ -2.46
Sdc4O35988 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.32□□□□□ -2.46
Sdc4O35988 Gm23262-201ENSMUST00000158323 168 ntBASIC-0.32□□□□□ -2.46
Sdc4O35988 Gm25241-201ENSMUST00000174909 84 ntBASIC-0.32□□□□□ -2.46
Sdc4O35988 Gm26217-201ENSMUST00000175212 84 ntBASIC-0.32□□□□□ -2.46
Sdc4O35988 Gm45673-201ENSMUST00000210293 358 ntBASIC-0.32□□□□□ -2.46
Sdc4O35988 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.32□□□□□ -2.46
Sdc4O35988 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.32□□□□□ -2.46
Sdc4O35988 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.32□□□□□ -2.46
Sdc4O35988 Gm26123-201ENSMUST00000083363 135 ntBASIC-0.32□□□□□ -2.46
Sdc4O35988 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-0.33□□□□□ -2.46
Sdc4O35988 Gm25828-201ENSMUST00000157087 95 ntBASIC-0.33□□□□□ -2.46
Sdc4O35988 Gm23982-201ENSMUST00000157141 106 ntBASIC-0.33□□□□□ -2.46
Sdc4O35988 Gm25615-201ENSMUST00000177836 94 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 76,532 protein–RNA pairs in 227.1 ms