Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mre11Q61216 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mre11Q61216 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mre11Q61216 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.37■□□□□ 0.85
Mre11Q61216 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mre11Q61216 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Mre11Q61216 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mre11Q61216 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Mre11Q61216 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Mre11Q61216 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mre11Q61216 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.37■□□□□ 0.85
Mre11Q61216 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.37■□□□□ 0.85
Mre11Q61216 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.37■□□□□ 0.85
Mre11Q61216 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Mre11Q61216 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.37■□□□□ 0.85
Mre11Q61216 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mre11Q61216 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mre11Q61216 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Mre11Q61216 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mre11Q61216 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mre11Q61216 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mre11Q61216 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mre11Q61216 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mre11Q61216 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Mre11Q61216 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Mre11Q61216 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mre11Q61216 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Mre11Q61216 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Mre11Q61216 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mre11Q61216 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mre11Q61216 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Mre11Q61216 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Mre11Q61216 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mre11Q61216 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mre11Q61216 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mre11Q61216 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mre11Q61216 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mre11Q61216 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Mre11Q61216 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mre11Q61216 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mre11Q61216 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mre11Q61216 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Mre11Q61216 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mre11Q61216 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mre11Q61216 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mre11Q61216 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Mre11Q61216 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
Mre11Q61216 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mre11Q61216 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Mre11Q61216 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mre11Q61216 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mre11Q61216 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mre11Q61216 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Mre11Q61216 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mre11Q61216 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Mre11Q61216 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Mre11Q61216 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Mre11Q61216 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mre11Q61216 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mre11Q61216 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mre11Q61216 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mre11Q61216 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mre11Q61216 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC20.34■□□□□ 0.85
Mre11Q61216 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mre11Q61216 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mre11Q61216 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Mre11Q61216 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.34■□□□□ 0.85
Mre11Q61216 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.34■□□□□ 0.85
Mre11Q61216 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.34■□□□□ 0.85
Mre11Q61216 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mre11Q61216 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Mre11Q61216 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mre11Q61216 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mre11Q61216 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mre11Q61216 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Mre11Q61216 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mre11Q61216 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mre11Q61216 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.33■□□□□ 0.85
Mre11Q61216 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Mre11Q61216 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mre11Q61216 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mre11Q61216 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mre11Q61216 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Mre11Q61216 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Mre11Q61216 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Mre11Q61216 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Mre11Q61216 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.33■□□□□ 0.84
Mre11Q61216 Gm45212-201ENSMUST00000205831 3403 ntBASIC20.33■□□□□ 0.84
Mre11Q61216 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Mre11Q61216 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC20.33■□□□□ 0.84
Mre11Q61216 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Mre11Q61216 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Mre11Q61216 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mre11Q61216 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mre11Q61216 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mre11Q61216 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Mre11Q61216 Gm13401-201ENSMUST00000117074 291 ntBASIC20.32■□□□□ 0.84
Mre11Q61216 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.32■□□□□ 0.84
Mre11Q61216 Gm38285-201ENSMUST00000192928 922 ntBASIC20.32■□□□□ 0.84
Mre11Q61216 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms