Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Znf235Q61116 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Znf235Q61116 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Znf235Q61116 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Znf235Q61116 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Znf235Q61116 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Znf235Q61116 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Znf235Q61116 Mir3081-201ENSMUST00000175305 84 ntBASIC17.74■□□□□ 0.43
Znf235Q61116 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.74■□□□□ 0.43
Znf235Q61116 Gm17971-201ENSMUST00000190239 806 ntBASIC17.74■□□□□ 0.43
Znf235Q61116 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Znf235Q61116 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Znf235Q61116 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Znf235Q61116 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Znf235Q61116 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Znf235Q61116 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Znf235Q61116 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.74■□□□□ 0.43
Znf235Q61116 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.74■□□□□ 0.43
Znf235Q61116 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Znf235Q61116 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Znf235Q61116 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.74■□□□□ 0.43
Znf235Q61116 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Znf235Q61116 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.74■□□□□ 0.43
Znf235Q61116 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Znf235Q61116 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Znf235Q61116 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Znf235Q61116 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.73■□□□□ 0.43
Znf235Q61116 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Znf235Q61116 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Znf235Q61116 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Znf235Q61116 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Znf235Q61116 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.72■□□□□ 0.43
Znf235Q61116 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.72■□□□□ 0.43
Znf235Q61116 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Znf235Q61116 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Znf235Q61116 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Znf235Q61116 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Znf235Q61116 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Znf235Q61116 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.72■□□□□ 0.43
Znf235Q61116 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.72■□□□□ 0.43
Znf235Q61116 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Znf235Q61116 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Znf235Q61116 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Znf235Q61116 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Znf235Q61116 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Znf235Q61116 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Znf235Q61116 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Znf235Q61116 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Znf235Q61116 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Znf235Q61116 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Znf235Q61116 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Znf235Q61116 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Znf235Q61116 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Znf235Q61116 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Znf235Q61116 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.71■□□□□ 0.43
Znf235Q61116 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Znf235Q61116 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Znf235Q61116 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Znf235Q61116 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Znf235Q61116 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Znf235Q61116 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Znf235Q61116 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Znf235Q61116 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Znf235Q61116 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Znf235Q61116 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Znf235Q61116 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Znf235Q61116 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Znf235Q61116 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Znf235Q61116 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.7■□□□□ 0.42
Znf235Q61116 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Znf235Q61116 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Znf235Q61116 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.7■□□□□ 0.42
Znf235Q61116 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.7■□□□□ 0.42
Znf235Q61116 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
Znf235Q61116 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Znf235Q61116 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Znf235Q61116 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Znf235Q61116 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Znf235Q61116 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Znf235Q61116 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.69■□□□□ 0.42
Znf235Q61116 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Znf235Q61116 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Znf235Q61116 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Znf235Q61116 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Znf235Q61116 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Znf235Q61116 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Znf235Q61116 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.69■□□□□ 0.42
Znf235Q61116 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Znf235Q61116 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Znf235Q61116 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Znf235Q61116 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Znf235Q61116 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.69■□□□□ 0.42
Znf235Q61116 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Znf235Q61116 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Znf235Q61116 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Znf235Q61116 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
Znf235Q61116 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Znf235Q61116 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Znf235Q61116 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.68■□□□□ 0.42
Znf235Q61116 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms