Protein–RNA interactions for Protein: Q497Q6

Fam228b, Protein FAM228B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228bQ497Q6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.33■□□□□ 0.85
Fam228bQ497Q6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.33■□□□□ 0.85
Fam228bQ497Q6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Fam228bQ497Q6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Fam228bQ497Q6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Fam228bQ497Q6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Fam228bQ497Q6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Fam228bQ497Q6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Fam228bQ497Q6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Fam228bQ497Q6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Fam228bQ497Q6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Fam228bQ497Q6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fam228bQ497Q6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fam228bQ497Q6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fam228bQ497Q6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Fam228bQ497Q6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Fam228bQ497Q6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Fam228bQ497Q6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fam228bQ497Q6 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.32■□□□□ 0.84
Fam228bQ497Q6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Fam228bQ497Q6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.31■□□□□ 0.84
Fam228bQ497Q6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam228bQ497Q6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam228bQ497Q6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam228bQ497Q6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.31■□□□□ 0.84
Fam228bQ497Q6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Fam228bQ497Q6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Fam228bQ497Q6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Fam228bQ497Q6 Gm18101-201ENSMUST00000215769 548 ntBASIC20.31■□□□□ 0.84
Fam228bQ497Q6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Fam228bQ497Q6 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.31■□□□□ 0.84
Fam228bQ497Q6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Fam228bQ497Q6 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.31■□□□□ 0.84
Fam228bQ497Q6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam228bQ497Q6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam228bQ497Q6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam228bQ497Q6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Fam228bQ497Q6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam228bQ497Q6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam228bQ497Q6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Fam228bQ497Q6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam228bQ497Q6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam228bQ497Q6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam228bQ497Q6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam228bQ497Q6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam228bQ497Q6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam228bQ497Q6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam228bQ497Q6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Fam228bQ497Q6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Fam228bQ497Q6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.29■□□□□ 0.84
Fam228bQ497Q6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam228bQ497Q6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.29■□□□□ 0.84
Fam228bQ497Q6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam228bQ497Q6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam228bQ497Q6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Fam228bQ497Q6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam228bQ497Q6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam228bQ497Q6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam228bQ497Q6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam228bQ497Q6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam228bQ497Q6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Fam228bQ497Q6 Gm44450-201ENSMUST00000199528 114 ntBASIC20.28■□□□□ 0.84
Fam228bQ497Q6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam228bQ497Q6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam228bQ497Q6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam228bQ497Q6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Fam228bQ497Q6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.28■□□□□ 0.84
Fam228bQ497Q6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Fam228bQ497Q6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.28■□□□□ 0.84
Fam228bQ497Q6 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.28■□□□□ 0.84
Fam228bQ497Q6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.27■□□□□ 0.84
Fam228bQ497Q6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam228bQ497Q6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Fam228bQ497Q6 Gm10013-201ENSMUST00000106074 672 ntBASIC20.27■□□□□ 0.84
Fam228bQ497Q6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam228bQ497Q6 Gm6659-201ENSMUST00000174752 547 ntBASIC20.27■□□□□ 0.84
Fam228bQ497Q6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam228bQ497Q6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.27■□□□□ 0.84
Fam228bQ497Q6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam228bQ497Q6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam228bQ497Q6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms