Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm24678-201ENSMUST00000158756 104 ntBASIC0.53□□□□□ -2.32
Cldn9Q9Z0S7 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.53□□□□□ -2.32
Cldn9Q9Z0S7 Gm27997-201ENSMUST00000184942 69 ntBASIC0.53□□□□□ -2.32
Cldn9Q9Z0S7 Gm42623-201ENSMUST00000197225 379 ntBASIC0.53□□□□□ -2.32
Cldn9Q9Z0S7 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC0.53□□□□□ -2.32
Cldn9Q9Z0S7 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.53□□□□□ -2.32
Cldn9Q9Z0S7 Mir181a-1-201ENSMUST00000083631 87 ntBASIC0.53□□□□□ -2.32
Cldn9Q9Z0S7 Gm23584-201ENSMUST00000157655 129 ntBASIC0.52□□□□□ -2.33
Cldn9Q9Z0S7 Gm23640-201ENSMUST00000157860 104 ntBASIC0.52□□□□□ -2.33
Cldn9Q9Z0S7 Gm24501-201ENSMUST00000158452 62 ntBASIC0.52□□□□□ -2.33
Cldn9Q9Z0S7 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.52□□□□□ -2.33
Cldn9Q9Z0S7 Gm16404-201ENSMUST00000177739 468 ntBASIC0.52□□□□□ -2.33
Cldn9Q9Z0S7 Gm14598-201ENSMUST00000180109 468 ntBASIC0.52□□□□□ -2.33
Cldn9Q9Z0S7 Gm14625-201ENSMUST00000180231 468 ntBASIC0.52□□□□□ -2.33
Cldn9Q9Z0S7 Gm38060-201ENSMUST00000194822 464 ntBASIC0.52□□□□□ -2.33
Cldn9Q9Z0S7 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.52□□□□□ -2.33
Cldn9Q9Z0S7 Gm24316-201ENSMUST00000083041 107 ntBASIC0.52□□□□□ -2.33
Cldn9Q9Z0S7 Mir101a-201ENSMUST00000083517 83 ntBASIC0.52□□□□□ -2.33
Cldn9Q9Z0S7 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.52□□□□□ -2.33
Cldn9Q9Z0S7 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Cldn9Q9Z0S7 Gm22321-201ENSMUST00000157152 104 ntBASIC0.51□□□□□ -2.33
Cldn9Q9Z0S7 Gm25968-201ENSMUST00000157167 100 ntBASIC0.51□□□□□ -2.33
Cldn9Q9Z0S7 Gm22796-201ENSMUST00000157234 106 ntBASIC0.51□□□□□ -2.33
Cldn9Q9Z0S7 Gm24880-201ENSMUST00000158776 85 ntBASIC0.51□□□□□ -2.33
Cldn9Q9Z0S7 Mir6904-201ENSMUST00000183443 67 ntBASIC0.51□□□□□ -2.33
Cldn9Q9Z0S7 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.51□□□□□ -2.33
Cldn9Q9Z0S7 Gm36956-201ENSMUST00000193830 214 ntBASIC0.51□□□□□ -2.33
Cldn9Q9Z0S7 Gm45616-201ENSMUST00000211711 319 ntBASIC0.51□□□□□ -2.33
Cldn9Q9Z0S7 Gm22283-201ENSMUST00000082556 161 ntBASIC0.51□□□□□ -2.33
Cldn9Q9Z0S7 Gm23845-201ENSMUST00000083834 152 ntBASIC0.51□□□□□ -2.33
Cldn9Q9Z0S7 Gm25378-201ENSMUST00000104333 129 ntBASIC0.5□□□□□ -2.33
Cldn9Q9Z0S7 Mir1197-201ENSMUST00000117037 120 ntBASIC0.5□□□□□ -2.33
Cldn9Q9Z0S7 Gm24594-201ENSMUST00000122502 99 ntBASIC0.5□□□□□ -2.33
Cldn9Q9Z0S7 Gm23571-201ENSMUST00000180073 127 ntBASIC0.5□□□□□ -2.33
Cldn9Q9Z0S7 Gm29512-201ENSMUST00000185544 315 ntBASIC0.5□□□□□ -2.33
Cldn9Q9Z0S7 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
Cldn9Q9Z0S7 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.5□□□□□ -2.33
Cldn9Q9Z0S7 Gm22302-201ENSMUST00000082657 106 ntBASIC0.5□□□□□ -2.33
Cldn9Q9Z0S7 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.49□□□□□ -2.33
Cldn9Q9Z0S7 Gm15030-201ENSMUST00000119804 484 ntBASIC0.49□□□□□ -2.33
Cldn9Q9Z0S7 Gm22482-201ENSMUST00000122563 359 ntBASIC0.49□□□□□ -2.33
Cldn9Q9Z0S7 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
Cldn9Q9Z0S7 Gm28669-201ENSMUST00000188400 100 ntBASIC0.49□□□□□ -2.33
Cldn9Q9Z0S7 Gm29665-201ENSMUST00000191457 528 ntBASIC0.49□□□□□ -2.33
Cldn9Q9Z0S7 Gm37313-201ENSMUST00000191673 290 ntBASIC0.49□□□□□ -2.33
Cldn9Q9Z0S7 Gm44057-201ENSMUST00000204547 96 ntBASIC0.49□□□□□ -2.33
Cldn9Q9Z0S7 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC0.49□□□□□ -2.33
Cldn9Q9Z0S7 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.49□□□□□ -2.33
Cldn9Q9Z0S7 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.49□□□□□ -2.33
Cldn9Q9Z0S7 CT010505.1-201ENSMUST00000227026 396 ntBASIC0.49□□□□□ -2.33
Cldn9Q9Z0S7 Gm24453-201ENSMUST00000083346 76 ntBASIC0.49□□□□□ -2.33
Cldn9Q9Z0S7 Gm22032-201ENSMUST00000116946 116 ntBASIC0.48□□□□□ -2.33
Cldn9Q9Z0S7 Gm14039-201ENSMUST00000118705 101 ntBASIC0.48□□□□□ -2.33
Cldn9Q9Z0S7 Gm24385-201ENSMUST00000122694 350 ntBASIC0.48□□□□□ -2.33
Cldn9Q9Z0S7 Gm24345-201ENSMUST00000158706 124 ntBASIC0.48□□□□□ -2.33
Cldn9Q9Z0S7 Gm16546-201ENSMUST00000159442 355 ntBASIC0.48□□□□□ -2.33
Cldn9Q9Z0S7 Gm16539-201ENSMUST00000160086 327 ntBASIC0.48□□□□□ -2.33
Cldn9Q9Z0S7 Gm26073-201ENSMUST00000179906 127 ntBASIC0.48□□□□□ -2.33
Cldn9Q9Z0S7 Gm38109-201ENSMUST00000195386 181 ntBASIC0.48□□□□□ -2.33
Cldn9Q9Z0S7 Gm43563-201ENSMUST00000196761 198 ntBASIC0.48□□□□□ -2.33
Cldn9Q9Z0S7 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.48□□□□□ -2.33
Cldn9Q9Z0S7 Gm43944-201ENSMUST00000205220 120 ntBASIC0.48□□□□□ -2.33
Cldn9Q9Z0S7 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.48□□□□□ -2.33
Cldn9Q9Z0S7 Gm44959-201ENSMUST00000209127 231 ntBASIC0.48□□□□□ -2.33
Cldn9Q9Z0S7 Gm45471-201ENSMUST00000211270 281 ntBASIC0.48□□□□□ -2.33
Cldn9Q9Z0S7 AC164117.2-201ENSMUST00000222090 327 ntBASIC0.48□□□□□ -2.33
Cldn9Q9Z0S7 Gm24204-201ENSMUST00000082950 107 ntBASIC0.48□□□□□ -2.33
Cldn9Q9Z0S7 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Cldn9Q9Z0S7 Mir709-201ENSMUST00000102190 88 ntBASIC0.47□□□□□ -2.33
Cldn9Q9Z0S7 Snord89-201ENSMUST00000104516 110 ntBASIC0.47□□□□□ -2.33
Cldn9Q9Z0S7 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC0.47□□□□□ -2.33
Cldn9Q9Z0S7 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC0.47□□□□□ -2.33
Cldn9Q9Z0S7 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.47□□□□□ -2.33
Cldn9Q9Z0S7 Gm24208-201ENSMUST00000082783 135 ntBASIC0.47□□□□□ -2.33
Cldn9Q9Z0S7 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.46□□□□□ -2.34
Cldn9Q9Z0S7 Gm27723-201ENSMUST00000157398 63 ntBASIC0.46□□□□□ -2.34
Cldn9Q9Z0S7 Gm22097-201ENSMUST00000157929 278 ntBASIC0.46□□□□□ -2.34
Cldn9Q9Z0S7 Gm27289-201ENSMUST00000183341 82 ntBASIC0.46□□□□□ -2.34
Cldn9Q9Z0S7 Mir7077-201ENSMUST00000183991 57 ntBASIC0.46□□□□□ -2.34
Cldn9Q9Z0S7 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.46□□□□□ -2.34
Cldn9Q9Z0S7 Gm25793-201ENSMUST00000083287 107 ntBASIC0.46□□□□□ -2.34
Cldn9Q9Z0S7 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Cldn9Q9Z0S7 Gm26484-201ENSMUST00000158018 106 ntBASIC0.45□□□□□ -2.34
Cldn9Q9Z0S7 Gm22522-201ENSMUST00000158271 151 ntBASIC0.45□□□□□ -2.34
Cldn9Q9Z0S7 Gm24737-201ENSMUST00000158861 100 ntBASIC0.45□□□□□ -2.34
Cldn9Q9Z0S7 Gm28211-201ENSMUST00000190920 315 ntBASIC0.45□□□□□ -2.34
Cldn9Q9Z0S7 Gm43432-201ENSMUST00000196352 121 ntBASIC0.45□□□□□ -2.34
Cldn9Q9Z0S7 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.45□□□□□ -2.34
Cldn9Q9Z0S7 Snora19-201ENSMUST00000082962 132 ntBASIC0.45□□□□□ -2.34
Cldn9Q9Z0S7 Gm23658-201ENSMUST00000083233 132 ntBASIC0.45□□□□□ -2.34
Cldn9Q9Z0S7 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
Cldn9Q9Z0S7 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Cldn9Q9Z0S7 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Cldn9Q9Z0S7 Gm25885-201ENSMUST00000157779 109 ntBASIC0.44□□□□□ -2.34
Cldn9Q9Z0S7 Gm25615-201ENSMUST00000177836 94 ntBASIC0.44□□□□□ -2.34
Cldn9Q9Z0S7 Gm23186-201ENSMUST00000180078 107 ntBASIC0.44□□□□□ -2.34
Cldn9Q9Z0S7 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.44□□□□□ -2.34
Cldn9Q9Z0S7 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.44□□□□□ -2.34
Cldn9Q9Z0S7 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.44□□□□□ -2.34
Cldn9Q9Z0S7 Gm24616-201ENSMUST00000083274 139 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 146.4 ms