Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Trim56Q80VI1 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Trim56Q80VI1 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Trim56Q80VI1 Gm25884-201ENSMUST00000157782 62 ntBASIC2.73□□□□□ -1.97
Trim56Q80VI1 Gm26864-201ENSMUST00000181346 156 ntBASIC2.73□□□□□ -1.97
Trim56Q80VI1 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.73□□□□□ -1.97
Trim56Q80VI1 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Trim56Q80VI1 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.72□□□□□ -1.97
Trim56Q80VI1 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.72□□□□□ -1.97
Trim56Q80VI1 Gm26015-201ENSMUST00000104402 125 ntBASIC2.72□□□□□ -1.97
Trim56Q80VI1 Gm14671-201ENSMUST00000121790 262 ntBASIC2.72□□□□□ -1.97
Trim56Q80VI1 Gm25558-201ENSMUST00000158083 106 ntBASIC2.72□□□□□ -1.97
Trim56Q80VI1 Gm25367-201ENSMUST00000158846 106 ntBASIC2.72□□□□□ -1.97
Trim56Q80VI1 Gm42960-201ENSMUST00000202160 241 ntBASIC2.72□□□□□ -1.97
Trim56Q80VI1 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.72□□□□□ -1.97
Trim56Q80VI1 Gm6109-201ENSMUST00000223297 348 ntBASIC2.72□□□□□ -1.97
Trim56Q80VI1 Gm22055-201ENSMUST00000083388 107 ntBASIC2.72□□□□□ -1.97
Trim56Q80VI1 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.72□□□□□ -1.97
Trim56Q80VI1 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
Trim56Q80VI1 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.71□□□□□ -1.98
Trim56Q80VI1 Gm23907-201ENSMUST00000104595 189 ntBASIC2.71□□□□□ -1.98
Trim56Q80VI1 Gm25910-201ENSMUST00000157620 140 ntBASIC2.71□□□□□ -1.98
Trim56Q80VI1 Gm23898-201ENSMUST00000158111 103 ntBASIC2.71□□□□□ -1.98
Trim56Q80VI1 Gm25642-201ENSMUST00000175137 66 ntBASIC2.71□□□□□ -1.98
Trim56Q80VI1 Gm22070-201ENSMUST00000178475 107 ntBASIC2.71□□□□□ -1.98
Trim56Q80VI1 Mir6353-201ENSMUST00000183596 113 ntBASIC2.71□□□□□ -1.98
Trim56Q80VI1 Gm27399-201ENSMUST00000184250 78 ntBASIC2.71□□□□□ -1.98
Trim56Q80VI1 Mir429-201ENSMUST00000083493 83 ntBASIC2.71□□□□□ -1.98
Trim56Q80VI1 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.71□□□□□ -1.98
Trim56Q80VI1 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.71□□□□□ -1.98
Trim56Q80VI1 Gm26342-201ENSMUST00000104557 129 ntBASIC2.7□□□□□ -1.98
Trim56Q80VI1 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.7□□□□□ -1.98
Trim56Q80VI1 Gm23253-201ENSMUST00000157441 104 ntBASIC2.7□□□□□ -1.98
Trim56Q80VI1 Gm25678-201ENSMUST00000174984 73 ntBASIC2.7□□□□□ -1.98
Trim56Q80VI1 Gm19855-201ENSMUST00000210145 249 ntBASIC2.7□□□□□ -1.98
Trim56Q80VI1 Snora33-201ENSMUST00000093556 129 ntBASIC2.7□□□□□ -1.98
Trim56Q80VI1 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Trim56Q80VI1 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.7□□□□□ -1.98
Trim56Q80VI1 Gm45544-201ENSMUST00000211130 88 ntBASIC2.69□□□□□ -1.98
Trim56Q80VI1 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.69□□□□□ -1.98
Trim56Q80VI1 Gm22004-201ENSMUST00000101884 107 ntBASIC2.68□□□□□ -1.98
Trim56Q80VI1 Gm26420-201ENSMUST00000104273 103 ntBASIC2.68□□□□□ -1.98
Trim56Q80VI1 Gm22486-201ENSMUST00000116815 137 ntBASIC2.68□□□□□ -1.98
Trim56Q80VI1 Gm26415-201ENSMUST00000157673 292 ntBASIC2.68□□□□□ -1.98
Trim56Q80VI1 Mir5118-201ENSMUST00000175551 67 ntBASIC2.68□□□□□ -1.98
Trim56Q80VI1 Gm44555-201ENSMUST00000209008 148 ntBASIC2.68□□□□□ -1.98
Trim56Q80VI1 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.68□□□□□ -1.98
Trim56Q80VI1 Gm23249-201ENSMUST00000083369 161 ntBASIC2.68□□□□□ -1.98
Trim56Q80VI1 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trim56Q80VI1 Gm26339-201ENSMUST00000102368 99 ntBASIC2.67□□□□□ -1.98
Trim56Q80VI1 Gm24280-201ENSMUST00000104237 134 ntBASIC2.67□□□□□ -1.98
Trim56Q80VI1 Gm12013-201ENSMUST00000121971 155 ntBASIC2.67□□□□□ -1.98
Trim56Q80VI1 Gm37330-201ENSMUST00000192606 153 ntBASIC2.67□□□□□ -1.98
Trim56Q80VI1 Gm43722-201ENSMUST00000196054 124 ntBASIC2.67□□□□□ -1.98
Trim56Q80VI1 Gm44477-201ENSMUST00000199661 110 ntBASIC2.67□□□□□ -1.98
Trim56Q80VI1 Gm16976-205ENSMUST00000227324 226 ntBASIC2.67□□□□□ -1.98
Trim56Q80VI1 Gm24261-201ENSMUST00000083744 104 ntBASIC2.67□□□□□ -1.98
Trim56Q80VI1 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trim56Q80VI1 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Trim56Q80VI1 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Trim56Q80VI1 Gm26280-201ENSMUST00000157096 101 ntBASIC2.66□□□□□ -1.98
Trim56Q80VI1 Gm22490-201ENSMUST00000157188 119 ntBASIC2.66□□□□□ -1.98
Trim56Q80VI1 Gm22228-201ENSMUST00000157364 101 ntBASIC2.66□□□□□ -1.98
Trim56Q80VI1 Gm22079-201ENSMUST00000157592 106 ntBASIC2.66□□□□□ -1.98
Trim56Q80VI1 Gm22517-201ENSMUST00000158265 136 ntBASIC2.66□□□□□ -1.98
Trim56Q80VI1 Gm23005-201ENSMUST00000158950 136 ntBASIC2.66□□□□□ -1.98
Trim56Q80VI1 Gm16584-201ENSMUST00000159267 189 ntBASIC2.66□□□□□ -1.98
Trim56Q80VI1 Gm44325-201ENSMUST00000196757 77 ntBASIC2.66□□□□□ -1.98
Trim56Q80VI1 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Trim56Q80VI1 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.65□□□□□ -1.98
Trim56Q80VI1 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.65□□□□□ -1.99
Trim56Q80VI1 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
Trim56Q80VI1 Gm22451-201ENSMUST00000122803 151 ntBASIC2.65□□□□□ -1.99
Trim56Q80VI1 Gm22768-201ENSMUST00000158366 153 ntBASIC2.65□□□□□ -1.99
Trim56Q80VI1 Gm16561-201ENSMUST00000163001 192 ntBASIC2.65□□□□□ -1.99
Trim56Q80VI1 Gm26379-202ENSMUST00000200225 132 ntBASIC2.65□□□□□ -1.99
Trim56Q80VI1 Gm45791-201ENSMUST00000212908 352 ntBASIC2.65□□□□□ -1.99
Trim56Q80VI1 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.65□□□□□ -1.99
Trim56Q80VI1 Snord104-201ENSMUST00000083192 70 ntBASIC2.65□□□□□ -1.99
Trim56Q80VI1 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Trim56Q80VI1 Gm25485-201ENSMUST00000104120 132 ntBASIC2.64□□□□□ -1.99
Trim56Q80VI1 Gm24851-201ENSMUST00000158028 103 ntBASIC2.64□□□□□ -1.99
Trim56Q80VI1 Gm24668-201ENSMUST00000158935 104 ntBASIC2.64□□□□□ -1.99
Trim56Q80VI1 Gm25069-201ENSMUST00000175238 86 ntBASIC2.64□□□□□ -1.99
Trim56Q80VI1 Gm7258-201ENSMUST00000179317 300 ntBASIC2.64□□□□□ -1.99
Trim56Q80VI1 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.64□□□□□ -1.99
Trim56Q80VI1 Gm24313-201ENSMUST00000082561 133 ntBASIC2.64□□□□□ -1.99
Trim56Q80VI1 Gm25357-201ENSMUST00000082745 72 ntBASIC2.64□□□□□ -1.99
Trim56Q80VI1 Gm22683-201ENSMUST00000082854 137 ntBASIC2.64□□□□□ -1.99
Trim56Q80VI1 Gm26326-201ENSMUST00000083070 129 ntBASIC2.64□□□□□ -1.99
Trim56Q80VI1 Gm24661-201ENSMUST00000083205 104 ntBASIC2.64□□□□□ -1.99
Trim56Q80VI1 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.63□□□□□ -1.99
Trim56Q80VI1 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
Trim56Q80VI1 Gm24049-201ENSMUST00000102409 100 ntBASIC2.63□□□□□ -1.99
Trim56Q80VI1 Mir6388-201ENSMUST00000184417 75 ntBASIC2.63□□□□□ -1.99
Trim56Q80VI1 Gm43324-201ENSMUST00000197482 289 ntBASIC2.63□□□□□ -1.99
Trim56Q80VI1 Gm25697-201ENSMUST00000082902 98 ntBASIC2.63□□□□□ -1.99
Trim56Q80VI1 Gm26168-201ENSMUST00000083787 112 ntBASIC2.63□□□□□ -1.99
Trim56Q80VI1 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Trim56Q80VI1 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 183.7 ms