Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm25364-201ENSMUST00000158851 107 ntBASIC1.86□□□□□ -2.11
Rnf220Q6PDX6 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Rnf220Q6PDX6 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Gm15067-201ENSMUST00000119534 156 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Gm22790-201ENSMUST00000157229 129 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Mir3061-201ENSMUST00000175129 91 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Gm23963-201ENSMUST00000179603 77 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Gm27511-201ENSMUST00000183502 127 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Gm43381-201ENSMUST00000198553 165 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Snora20-201ENSMUST00000082703 128 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Gm25038-201ENSMUST00000082928 130 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Gm25136-201ENSMUST00000083253 115 ntBASIC1.85□□□□□ -2.11
Rnf220Q6PDX6 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 Gm24010-201ENSMUST00000157731 282 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 Gm23342-201ENSMUST00000158958 115 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 Gm20391-201ENSMUST00000174722 106 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 Mir7016-201ENSMUST00000184308 72 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 Gm8219-201ENSMUST00000218309 242 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 AC168880.2-201ENSMUST00000224488 201 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 AC151902.2-201ENSMUST00000226419 301 ntBASIC1.84□□□□□ -2.11
Rnf220Q6PDX6 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.83□□□□□ -2.12
Rnf220Q6PDX6 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.83□□□□□ -2.12
Rnf220Q6PDX6 Gm22403-201ENSMUST00000174919 84 ntBASIC1.83□□□□□ -2.12
Rnf220Q6PDX6 Mir3103-201ENSMUST00000175474 67 ntBASIC1.83□□□□□ -2.12
Rnf220Q6PDX6 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.83□□□□□ -2.12
Rnf220Q6PDX6 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.83□□□□□ -2.12
Rnf220Q6PDX6 Gm22683-201ENSMUST00000082854 137 ntBASIC1.83□□□□□ -2.12
Rnf220Q6PDX6 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Mir544-201ENSMUST00000103813 78 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Gm24263-201ENSMUST00000104059 107 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Gm25980-201ENSMUST00000157176 218 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Gm22082-201ENSMUST00000157587 161 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Mir7675-201ENSMUST00000184262 58 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Gm18502-201ENSMUST00000218679 199 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Gm24165-201ENSMUST00000082718 128 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Gm26326-201ENSMUST00000083070 129 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Mir489-201ENSMUST00000093599 107 ntBASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Rnf220Q6PDX6 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Rnf220Q6PDX6 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Rnf220Q6PDX6 Gm11792-201ENSMUST00000120640 168 ntBASIC1.81□□□□□ -2.12
Rnf220Q6PDX6 Gm37545-201ENSMUST00000186512 148 ntBASIC1.81□□□□□ -2.12
Rnf220Q6PDX6 Gm45471-201ENSMUST00000211270 281 ntBASIC1.81□□□□□ -2.12
Rnf220Q6PDX6 Snord61-201ENSMUST00000083176 71 ntBASIC1.81□□□□□ -2.12
Rnf220Q6PDX6 Gm23947-201ENSMUST00000093636 107 ntBASIC1.81□□□□□ -2.12
Rnf220Q6PDX6 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Gm25090-201ENSMUST00000104000 132 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Gm26015-201ENSMUST00000104402 125 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Gm22105-201ENSMUST00000116734 116 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Gm6444-201ENSMUST00000119611 458 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Gm22603-201ENSMUST00000157603 96 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Gm23277-201ENSMUST00000157914 136 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Gm22159-201ENSMUST00000158412 130 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Gm44358-201ENSMUST00000196301 98 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Mir3969-201ENSMUST00000197106 92 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 AC155839.1-201ENSMUST00000200105 147 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Mir497-201ENSMUST00000200557 84 ntBASIC1.8□□□□□ -2.12
Rnf220Q6PDX6 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Gm24098-201ENSMUST00000102075 109 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Gm25381-201ENSMUST00000102078 109 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Gm22727-201ENSMUST00000158090 116 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Mir6379-201ENSMUST00000183392 115 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Gm18665-201ENSMUST00000189783 270 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Gm45754-201ENSMUST00000212380 279 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Mir451a-201ENSMUST00000093557 72 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.79□□□□□ -2.12
Rnf220Q6PDX6 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Rnf220Q6PDX6 Gm26090-201ENSMUST00000157897 128 ntBASIC1.78□□□□□ -2.12
Rnf220Q6PDX6 Gm22386-201ENSMUST00000158192 129 ntBASIC1.78□□□□□ -2.12
Rnf220Q6PDX6 Gm23760-201ENSMUST00000158350 116 ntBASIC1.78□□□□□ -2.12
Rnf220Q6PDX6 Gm25769-201ENSMUST00000158569 127 ntBASIC1.78□□□□□ -2.12
Rnf220Q6PDX6 Gm24677-201ENSMUST00000158755 150 ntBASIC1.78□□□□□ -2.12
Rnf220Q6PDX6 Trbv7-201ENSMUST00000193339 402 ntBASIC1.78□□□□□ -2.12
Rnf220Q6PDX6 Gm23299-201ENSMUST00000082708 79 ntBASIC1.78□□□□□ -2.12
Rnf220Q6PDX6 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Rnf220Q6PDX6 Gm25068-201ENSMUST00000103895 110 ntBASIC1.77□□□□□ -2.13
Rnf220Q6PDX6 Gm25094-201ENSMUST00000103992 131 ntBASIC1.77□□□□□ -2.13
Rnf220Q6PDX6 Snord90-201ENSMUST00000104568 111 ntBASIC1.77□□□□□ -2.13
Rnf220Q6PDX6 Gm13588-201ENSMUST00000120026 135 ntBASIC1.77□□□□□ -2.13
Rnf220Q6PDX6 Gm25949-201ENSMUST00000175333 114 ntBASIC1.77□□□□□ -2.13
Rnf220Q6PDX6 Gm23419-201ENSMUST00000175523 84 ntBASIC1.77□□□□□ -2.13
Rnf220Q6PDX6 Gm37778-201ENSMUST00000191732 190 ntBASIC1.77□□□□□ -2.13
Rnf220Q6PDX6 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Rnf220Q6PDX6 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Rnf220Q6PDX6 Gm26420-201ENSMUST00000104273 103 ntBASIC1.76□□□□□ -2.13
Rnf220Q6PDX6 Gm25707-201ENSMUST00000175120 96 ntBASIC1.76□□□□□ -2.13
Rnf220Q6PDX6 Gm22929-201ENSMUST00000175517 107 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 209.5 ms