Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm23468-201ENSMUST00000157125 108 ntBASIC2.87□□□□□ -1.95
Col18a1P39061 Gm24911-201ENSMUST00000157292 136 ntBASIC2.87□□□□□ -1.95
Col18a1P39061 Gm22108-201ENSMUST00000177961 106 ntBASIC2.87□□□□□ -1.95
Col18a1P39061 Gm24798-201ENSMUST00000179334 106 ntBASIC2.87□□□□□ -1.95
Col18a1P39061 Gm44349-201ENSMUST00000197048 123 ntBASIC2.87□□□□□ -1.95
Col18a1P39061 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.87□□□□□ -1.95
Col18a1P39061 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.87□□□□□ -1.95
Col18a1P39061 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.87□□□□□ -1.95
Col18a1P39061 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.87□□□□□ -1.95
Col18a1P39061 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Col18a1P39061 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
Col18a1P39061 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.87□□□□□ -1.95
Col18a1P39061 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
Col18a1P39061 Mir693-201ENSMUST00000102187 89 ntBASIC2.87□□□□□ -1.95
Col18a1P39061 Gm22082-201ENSMUST00000157587 161 ntBASIC2.87□□□□□ -1.95
Col18a1P39061 Gm28169-201ENSMUST00000190342 345 ntBASIC2.87□□□□□ -1.95
Col18a1P39061 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
Col18a1P39061 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Col18a1P39061 Gm24582-201ENSMUST00000103967 103 ntBASIC2.86□□□□□ -1.95
Col18a1P39061 Gm24892-201ENSMUST00000122747 104 ntBASIC2.86□□□□□ -1.95
Col18a1P39061 Gm23535-201ENSMUST00000157542 106 ntBASIC2.86□□□□□ -1.95
Col18a1P39061 Gm23567-201ENSMUST00000178005 107 ntBASIC2.86□□□□□ -1.95
Col18a1P39061 Gm24674-201ENSMUST00000179194 104 ntBASIC2.86□□□□□ -1.95
Col18a1P39061 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.86□□□□□ -1.95
Col18a1P39061 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.86□□□□□ -1.95
Col18a1P39061 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col18a1P39061 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Col18a1P39061 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Col18a1P39061 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.85□□□□□ -1.95
Col18a1P39061 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.85□□□□□ -1.95
Col18a1P39061 Gm19563-201ENSMUST00000222031 270 ntBASIC2.85□□□□□ -1.95
Col18a1P39061 Mir489-201ENSMUST00000093599 107 ntBASIC2.85□□□□□ -1.95
Col18a1P39061 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.85□□□□□ -1.95
Col18a1P39061 Gm14946-201ENSMUST00000119859 296 ntBASIC2.84□□□□□ -1.95
Col18a1P39061 Gm24947-201ENSMUST00000158334 110 ntBASIC2.84□□□□□ -1.95
Col18a1P39061 Gm27527-201ENSMUST00000183903 99 ntBASIC2.84□□□□□ -1.95
Col18a1P39061 Gm20058-201ENSMUST00000186939 284 ntBASIC2.84□□□□□ -1.95
Col18a1P39061 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.84□□□□□ -1.95
Col18a1P39061 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.84□□□□□ -1.95
Col18a1P39061 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.84□□□□□ -1.95
Col18a1P39061 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
Col18a1P39061 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
Col18a1P39061 Gm23588-201ENSMUST00000157659 99 ntBASIC2.84□□□□□ -1.96
Col18a1P39061 Gm22425-201ENSMUST00000158532 138 ntBASIC2.84□□□□□ -1.96
Col18a1P39061 Gm43977-201ENSMUST00000203970 189 ntBASIC2.84□□□□□ -1.96
Col18a1P39061 Gm24977-201ENSMUST00000083106 163 ntBASIC2.84□□□□□ -1.96
Col18a1P39061 Gm25513-201ENSMUST00000083861 162 ntBASIC2.84□□□□□ -1.96
Col18a1P39061 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Col18a1P39061 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Col18a1P39061 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
Col18a1P39061 Gm22796-201ENSMUST00000157234 106 ntBASIC2.83□□□□□ -1.96
Col18a1P39061 Gm23665-201ENSMUST00000158054 62 ntBASIC2.83□□□□□ -1.96
Col18a1P39061 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Col18a1P39061 Gm27733-201ENSMUST00000184803 68 ntBASIC2.83□□□□□ -1.96
Col18a1P39061 Gm43239-201ENSMUST00000200131 201 ntBASIC2.83□□□□□ -1.96
Col18a1P39061 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.83□□□□□ -1.96
Col18a1P39061 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.83□□□□□ -1.96
Col18a1P39061 Gm23202-201ENSMUST00000104376 129 ntBASIC2.82□□□□□ -1.96
Col18a1P39061 Gm23083-201ENSMUST00000157851 116 ntBASIC2.82□□□□□ -1.96
Col18a1P39061 Mir28b-201ENSMUST00000175399 80 ntBASIC2.82□□□□□ -1.96
Col18a1P39061 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Col18a1P39061 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Col18a1P39061 Gm22935-201ENSMUST00000103960 104 ntBASIC2.82□□□□□ -1.96
Col18a1P39061 Gm22149-201ENSMUST00000104442 136 ntBASIC2.82□□□□□ -1.96
Col18a1P39061 Mir1197-201ENSMUST00000117037 120 ntBASIC2.82□□□□□ -1.96
Col18a1P39061 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC2.82□□□□□ -1.96
Col18a1P39061 Gm22319-201ENSMUST00000157147 122 ntBASIC2.82□□□□□ -1.96
Col18a1P39061 Gm23715-201ENSMUST00000157354 106 ntBASIC2.82□□□□□ -1.96
Col18a1P39061 Gm22963-201ENSMUST00000157960 91 ntBASIC2.82□□□□□ -1.96
Col18a1P39061 Gm23384-201ENSMUST00000158593 103 ntBASIC2.82□□□□□ -1.96
Col18a1P39061 Gm25711-201ENSMUST00000158633 128 ntBASIC2.82□□□□□ -1.96
Col18a1P39061 Gm27520-201ENSMUST00000184872 81 ntBASIC2.82□□□□□ -1.96
Col18a1P39061 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.82□□□□□ -1.96
Col18a1P39061 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.82□□□□□ -1.96
Col18a1P39061 AC124549.2-201ENSMUST00000224243 222 ntBASIC2.82□□□□□ -1.96
Col18a1P39061 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col18a1P39061 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col18a1P39061 Gm23183-201ENSMUST00000122595 323 ntBASIC2.81□□□□□ -1.96
Col18a1P39061 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC2.81□□□□□ -1.96
Col18a1P39061 Gm24637-201ENSMUST00000158674 85 ntBASIC2.81□□□□□ -1.96
Col18a1P39061 Gm23967-201ENSMUST00000175062 78 ntBASIC2.81□□□□□ -1.96
Col18a1P39061 Gm27987-201ENSMUST00000184023 93 ntBASIC2.81□□□□□ -1.96
Col18a1P39061 Gm24918-201ENSMUST00000083022 130 ntBASIC2.81□□□□□ -1.96
Col18a1P39061 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col18a1P39061 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Col18a1P39061 Gm24559-201ENSMUST00000157519 121 ntBASIC2.8□□□□□ -1.96
Col18a1P39061 Gm23261-201ENSMUST00000158316 136 ntBASIC2.8□□□□□ -1.96
Col18a1P39061 AC140930.2-201ENSMUST00000221803 109 ntBASIC2.8□□□□□ -1.96
Col18a1P39061 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.8□□□□□ -1.96
Col18a1P39061 Gm22306-201ENSMUST00000082692 107 ntBASIC2.8□□□□□ -1.96
Col18a1P39061 Gm24524-201ENSMUST00000082925 170 ntBASIC2.8□□□□□ -1.96
Col18a1P39061 Gm15281-201ENSMUST00000125181 351 ntBASIC2.79□□□□□ -1.96
Col18a1P39061 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.79□□□□□ -1.96
Col18a1P39061 AC122335.1-201ENSMUST00000217587 175 ntBASIC2.79□□□□□ -1.96
Col18a1P39061 Gm6030-201ENSMUST00000078768 402 ntBASIC2.79□□□□□ -1.96
Col18a1P39061 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Col18a1P39061 Gm27396-201ENSMUST00000157708 58 ntBASIC2.79□□□□□ -1.96
Col18a1P39061 Gm25370-201ENSMUST00000158159 94 ntBASIC2.79□□□□□ -1.96
Col18a1P39061 Mir5619-201ENSMUST00000176065 61 ntBASIC2.79□□□□□ -1.96
Col18a1P39061 Gm28794-201ENSMUST00000185276 136 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 151.4 ms