Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Mir1a-1-201ENSMUST00000093635 77 ntBASIC2.49□□□□□ -2.01
Hoxd3P09027 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Hoxd3P09027 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Hoxd3P09027 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Hoxd3P09027 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Hoxd3P09027 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Hoxd3P09027 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Hoxd3P09027 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Hoxd3P09027 Gm15190-201ENSMUST00000120855 276 ntBASIC2.48□□□□□ -2.01
Hoxd3P09027 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Hoxd3P09027 Gm23391-201ENSMUST00000157579 104 ntBASIC2.48□□□□□ -2.01
Hoxd3P09027 Gm26369-201ENSMUST00000157825 100 ntBASIC2.48□□□□□ -2.01
Hoxd3P09027 Gm22089-201ENSMUST00000158336 102 ntBASIC2.48□□□□□ -2.01
Hoxd3P09027 Gm44807-201ENSMUST00000206115 154 ntBASIC2.48□□□□□ -2.01
Hoxd3P09027 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.48□□□□□ -2.01
Hoxd3P09027 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Hoxd3P09027 Gm44150-201ENSMUST00000203317 2619 ntBASIC2.48□□□□□ -2.01
Hoxd3P09027 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Hoxd3P09027 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Hoxd3P09027 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Hoxd3P09027 Gm25308-201ENSMUST00000104171 158 ntBASIC2.47□□□□□ -2.01
Hoxd3P09027 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.47□□□□□ -2.01
Hoxd3P09027 Gm26090-201ENSMUST00000157897 128 ntBASIC2.47□□□□□ -2.01
Hoxd3P09027 Gm23761-201ENSMUST00000158347 104 ntBASIC2.47□□□□□ -2.01
Hoxd3P09027 Gm24771-201ENSMUST00000158508 137 ntBASIC2.47□□□□□ -2.01
Hoxd3P09027 Gm22888-201ENSMUST00000158640 77 ntBASIC2.47□□□□□ -2.01
Hoxd3P09027 Gm6788-201ENSMUST00000166459 270 ntBASIC2.47□□□□□ -2.01
Hoxd3P09027 Gm25229-201ENSMUST00000178587 79 ntBASIC2.47□□□□□ -2.01
Hoxd3P09027 Mir3961-201ENSMUST00000198795 59 ntBASIC2.47□□□□□ -2.01
Hoxd3P09027 Gm23370-201ENSMUST00000199545 130 ntBASIC2.47□□□□□ -2.01
Hoxd3P09027 Mir7215-201ENSMUST00000200383 51 ntBASIC2.47□□□□□ -2.01
Hoxd3P09027 Gm44600-201ENSMUST00000208540 111 ntBASIC2.47□□□□□ -2.01
Hoxd3P09027 Gm22743-201ENSMUST00000083445 133 ntBASIC2.47□□□□□ -2.01
Hoxd3P09027 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Hoxd3P09027 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Hoxd3P09027 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Hoxd3P09027 Mir878-201ENSMUST00000104680 78 ntBASIC2.46□□□□□ -2.02
Hoxd3P09027 Gm11248-201ENSMUST00000119568 201 ntBASIC2.46□□□□□ -2.02
Hoxd3P09027 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC2.46□□□□□ -2.02
Hoxd3P09027 Gm27893-201ENSMUST00000184408 194 ntBASIC2.46□□□□□ -2.02
Hoxd3P09027 Mir6993-201ENSMUST00000184912 65 ntBASIC2.46□□□□□ -2.02
Hoxd3P09027 Gm44478-201ENSMUST00000204875 114 ntBASIC2.46□□□□□ -2.02
Hoxd3P09027 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.46□□□□□ -2.02
Hoxd3P09027 Gm22458-201ENSMUST00000082576 107 ntBASIC2.46□□□□□ -2.02
Hoxd3P09027 Gm23738-201ENSMUST00000082828 171 ntBASIC2.46□□□□□ -2.02
Hoxd3P09027 Mir30c-2-201ENSMUST00000083633 84 ntBASIC2.46□□□□□ -2.02
Hoxd3P09027 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Hoxd3P09027 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Hoxd3P09027 Gm26080-201ENSMUST00000104069 131 ntBASIC2.45□□□□□ -2.02
Hoxd3P09027 Gm25168-201ENSMUST00000104189 132 ntBASIC2.45□□□□□ -2.02
Hoxd3P09027 Gm16021-201ENSMUST00000121176 219 ntBASIC2.45□□□□□ -2.02
Hoxd3P09027 Gm25490-201ENSMUST00000158734 130 ntBASIC2.45□□□□□ -2.02
Hoxd3P09027 Gm24668-201ENSMUST00000158935 104 ntBASIC2.45□□□□□ -2.02
Hoxd3P09027 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Hoxd3P09027 Gm27648-201ENSMUST00000184315 107 ntBASIC2.45□□□□□ -2.02
Hoxd3P09027 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.45□□□□□ -2.02
Hoxd3P09027 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Hoxd3P09027 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Hoxd3P09027 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC2.44□□□□□ -2.02
Hoxd3P09027 Gm22677-201ENSMUST00000116977 108 ntBASIC2.44□□□□□ -2.02
Hoxd3P09027 Gm24627-201ENSMUST00000122764 138 ntBASIC2.44□□□□□ -2.02
Hoxd3P09027 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.44□□□□□ -2.02
Hoxd3P09027 Gm27783-201ENSMUST00000183534 105 ntBASIC2.44□□□□□ -2.02
Hoxd3P09027 Gm28647-201ENSMUST00000188416 197 ntBASIC2.44□□□□□ -2.02
Hoxd3P09027 Gm42935-201ENSMUST00000202004 151 ntBASIC2.44□□□□□ -2.02
Hoxd3P09027 AC158631.1-201ENSMUST00000219202 138 ntBASIC2.44□□□□□ -2.02
Hoxd3P09027 mt-Tc-201ENSMUST00000082400 66 ntBASIC2.44□□□□□ -2.02
Hoxd3P09027 Mir451a-201ENSMUST00000093557 72 ntBASIC2.44□□□□□ -2.02
Hoxd3P09027 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Hoxd3P09027 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Hoxd3P09027 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Hoxd3P09027 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.44□□□□□ -2.02
Hoxd3P09027 Gm11856-201ENSMUST00000118712 276 ntBASIC2.43□□□□□ -2.02
Hoxd3P09027 Gm14389-201ENSMUST00000140453 241 ntBASIC2.43□□□□□ -2.02
Hoxd3P09027 Gm26099-201ENSMUST00000157248 109 ntBASIC2.43□□□□□ -2.02
Hoxd3P09027 Mir8096-201ENSMUST00000184526 127 ntBASIC2.43□□□□□ -2.02
Hoxd3P09027 Gm27639-201ENSMUST00000184937 85 ntBASIC2.43□□□□□ -2.02
Hoxd3P09027 Gm25696-201ENSMUST00000082900 105 ntBASIC2.43□□□□□ -2.02
Hoxd3P09027 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Hoxd3P09027 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Hoxd3P09027 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Hoxd3P09027 Mir880-201ENSMUST00000104809 78 ntBASIC2.42□□□□□ -2.02
Hoxd3P09027 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.42□□□□□ -2.02
Hoxd3P09027 Gm22522-201ENSMUST00000158271 151 ntBASIC2.42□□□□□ -2.02
Hoxd3P09027 Mir3106-201ENSMUST00000175401 82 ntBASIC2.42□□□□□ -2.02
Hoxd3P09027 Gm26297-201ENSMUST00000179464 132 ntBASIC2.42□□□□□ -2.02
Hoxd3P09027 AC159093.2-201ENSMUST00000227881 297 ntBASIC2.42□□□□□ -2.02
Hoxd3P09027 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Hoxd3P09027 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.41□□□□□ -2.02
Hoxd3P09027 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Hoxd3P09027 Gm22939-201ENSMUST00000103958 131 ntBASIC2.41□□□□□ -2.02
Hoxd3P09027 Mir1198-201ENSMUST00000116995 121 ntBASIC2.41□□□□□ -2.02
Hoxd3P09027 Gm8260-201ENSMUST00000119230 353 ntBASIC2.41□□□□□ -2.02
Hoxd3P09027 Gm26477-201ENSMUST00000122617 323 ntBASIC2.41□□□□□ -2.02
Hoxd3P09027 Gm27987-201ENSMUST00000184023 93 ntBASIC2.41□□□□□ -2.02
Hoxd3P09027 Gm44223-201ENSMUST00000204854 114 ntBASIC2.41□□□□□ -2.02
Hoxd3P09027 Gm25644-201ENSMUST00000083209 107 ntBASIC2.41□□□□□ -2.02
Hoxd3P09027 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Hoxd3P09027 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
Hoxd3P09027 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 139 ms