Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm22841-201ENSMUST00000158443 62 ntBASIC-0.14□□□□□ -2.43
Sdc4O35988 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.14□□□□□ -2.43
Sdc4O35988 Gm28330-201ENSMUST00000190353 171 ntBASIC-0.14□□□□□ -2.43
Sdc4O35988 Gm45544-201ENSMUST00000211130 88 ntBASIC-0.14□□□□□ -2.43
Sdc4O35988 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.14□□□□□ -2.43
Sdc4O35988 Gm24037-201ENSMUST00000082871 180 ntBASIC-0.14□□□□□ -2.43
Sdc4O35988 Snord82-201ENSMUST00000082889 70 ntBASIC-0.14□□□□□ -2.43
Sdc4O35988 Gm22294-201ENSMUST00000083308 104 ntBASIC-0.14□□□□□ -2.43
Sdc4O35988 Mir532-201ENSMUST00000093630 96 ntBASIC-0.14□□□□□ -2.43
Sdc4O35988 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-0.15□□□□□ -2.43
Sdc4O35988 Gm22466-201ENSMUST00000175278 69 ntBASIC-0.15□□□□□ -2.43
Sdc4O35988 Gm23191-201ENSMUST00000179147 107 ntBASIC-0.15□□□□□ -2.43
Sdc4O35988 Mir7010-201ENSMUST00000183464 63 ntBASIC-0.15□□□□□ -2.43
Sdc4O35988 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.15□□□□□ -2.43
Sdc4O35988 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.15□□□□□ -2.43
Sdc4O35988 AC116589.4-201ENSMUST00000222390 216 ntBASIC-0.15□□□□□ -2.43
Sdc4O35988 AC098718.2-201ENSMUST00000226822 285 ntBASIC-0.15□□□□□ -2.43
Sdc4O35988 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.15□□□□□ -2.43
Sdc4O35988 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.15□□□□□ -2.43
Sdc4O35988 Mirlet7g-201ENSMUST00000083506 88 ntBASIC-0.15□□□□□ -2.43
Sdc4O35988 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-0.15□□□□□ -2.43
Sdc4O35988 Gm24164-201ENSMUST00000093663 104 ntBASIC-0.15□□□□□ -2.43
Sdc4O35988 Gm24116-201ENSMUST00000103975 107 ntBASIC-0.16□□□□□ -2.44
Sdc4O35988 Gm23536-201ENSMUST00000157541 134 ntBASIC-0.16□□□□□ -2.44
Sdc4O35988 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.16□□□□□ -2.44
Sdc4O35988 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.16□□□□□ -2.44
Sdc4O35988 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-0.16□□□□□ -2.44
Sdc4O35988 Gm36946-201ENSMUST00000192706 435 ntBASIC-0.16□□□□□ -2.44
Sdc4O35988 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC-0.16□□□□□ -2.44
Sdc4O35988 AC132437.1-201ENSMUST00000218308 320 ntBASIC-0.16□□□□□ -2.44
Sdc4O35988 AC116589.1-201ENSMUST00000220634 327 ntBASIC-0.16□□□□□ -2.44
Sdc4O35988 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.16□□□□□ -2.44
Sdc4O35988 Mir496a-201ENSMUST00000093627 79 ntBASIC-0.16□□□□□ -2.44
Sdc4O35988 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.17□□□□□ -2.44
Sdc4O35988 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
Sdc4O35988 Gm24504-201ENSMUST00000157679 100 ntBASIC-0.17□□□□□ -2.44
Sdc4O35988 Gm29013-201ENSMUST00000187431 237 ntBASIC-0.17□□□□□ -2.44
Sdc4O35988 AC145736.2-201ENSMUST00000216305 365 ntBASIC-0.17□□□□□ -2.44
Sdc4O35988 AC129085.1-201ENSMUST00000225263 165 ntBASIC-0.17□□□□□ -2.44
Sdc4O35988 Mir382-201ENSMUST00000083494 76 ntBASIC-0.17□□□□□ -2.44
Sdc4O35988 Gm3867-201ENSMUST00000086108 279 ntBASIC-0.17□□□□□ -2.44
Sdc4O35988 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.18□□□□□ -2.44
Sdc4O35988 Gm12770-201ENSMUST00000121734 462 ntBASIC-0.18□□□□□ -2.44
Sdc4O35988 Gm26393-201ENSMUST00000157625 129 ntBASIC-0.18□□□□□ -2.44
Sdc4O35988 Gm23375-201ENSMUST00000175407 83 ntBASIC-0.18□□□□□ -2.44
Sdc4O35988 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
Sdc4O35988 AC102369.1-201ENSMUST00000218415 373 ntBASIC-0.18□□□□□ -2.44
Sdc4O35988 AC164297.5-201ENSMUST00000224365 198 ntBASIC-0.18□□□□□ -2.44
Sdc4O35988 AC116319.1-201ENSMUST00000227765 222 ntBASIC-0.18□□□□□ -2.44
Sdc4O35988 Gm23097-201ENSMUST00000083448 105 ntBASIC-0.18□□□□□ -2.44
Sdc4O35988 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.18□□□□□ -2.44
Sdc4O35988 Gm22753-201ENSMUST00000083657 107 ntBASIC-0.18□□□□□ -2.44
Sdc4O35988 Gm13518-201ENSMUST00000120018 233 ntBASIC-0.19□□□□□ -2.44
Sdc4O35988 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.19□□□□□ -2.44
Sdc4O35988 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.19□□□□□ -2.44
Sdc4O35988 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.19□□□□□ -2.44
Sdc4O35988 Mir6390-201ENSMUST00000184405 129 ntBASIC-0.19□□□□□ -2.44
Sdc4O35988 Gm43563-201ENSMUST00000196761 198 ntBASIC-0.19□□□□□ -2.44
Sdc4O35988 Gm36189-201ENSMUST00000204113 523 ntBASIC-0.19□□□□□ -2.44
Sdc4O35988 Snord85-201ENSMUST00000083262 73 ntBASIC-0.19□□□□□ -2.44
Sdc4O35988 Gm14293-201ENSMUST00000118528 577 ntBASIC-0.2□□□□□ -2.44
Sdc4O35988 Gm11522-201ENSMUST00000120533 176 ntBASIC-0.2□□□□□ -2.44
Sdc4O35988 Gm24728-201ENSMUST00000158226 125 ntBASIC-0.2□□□□□ -2.44
Sdc4O35988 Gm24499-201ENSMUST00000158446 104 ntBASIC-0.2□□□□□ -2.44
Sdc4O35988 Gm23194-201ENSMUST00000158813 105 ntBASIC-0.2□□□□□ -2.44
Sdc4O35988 Gm25450-201ENSMUST00000179144 107 ntBASIC-0.2□□□□□ -2.44
Sdc4O35988 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.2□□□□□ -2.44
Sdc4O35988 Gm22576-201ENSMUST00000083733 104 ntBASIC-0.2□□□□□ -2.44
Sdc4O35988 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.21□□□□□ -2.44
Sdc4O35988 Gm26421-201ENSMUST00000104279 132 ntBASIC-0.21□□□□□ -2.44
Sdc4O35988 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.21□□□□□ -2.44
Sdc4O35988 Gm14671-201ENSMUST00000121790 262 ntBASIC-0.21□□□□□ -2.44
Sdc4O35988 Gm12785-201ENSMUST00000122052 172 ntBASIC-0.21□□□□□ -2.44
Sdc4O35988 Gm24629-201ENSMUST00000122762 89 ntBASIC-0.21□□□□□ -2.44
Sdc4O35988 Gm24509-201ENSMUST00000157086 101 ntBASIC-0.21□□□□□ -2.44
Sdc4O35988 Gm25358-201ENSMUST00000157189 101 ntBASIC-0.21□□□□□ -2.44
Sdc4O35988 Gm24634-201ENSMUST00000158672 107 ntBASIC-0.21□□□□□ -2.44
Sdc4O35988 Gm23474-201ENSMUST00000158884 75 ntBASIC-0.21□□□□□ -2.44
Sdc4O35988 Mir100-201ENSMUST00000175270 80 ntBASIC-0.21□□□□□ -2.44
Sdc4O35988 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
Sdc4O35988 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC-0.21□□□□□ -2.44
Sdc4O35988 Gm44464-201ENSMUST00000198010 138 ntBASIC-0.21□□□□□ -2.44
Sdc4O35988 AC132615.1-201ENSMUST00000213873 255 ntBASIC-0.21□□□□□ -2.44
Sdc4O35988 Gm26495-201ENSMUST00000083152 137 ntBASIC-0.21□□□□□ -2.44
Sdc4O35988 Gm24278-201ENSMUST00000104239 127 ntBASIC-0.22□□□□□ -2.44
Sdc4O35988 Gm15002-201ENSMUST00000118406 452 ntBASIC-0.22□□□□□ -2.44
Sdc4O35988 Gm14574-201ENSMUST00000120644 279 ntBASIC-0.22□□□□□ -2.44
Sdc4O35988 Gm28648-201ENSMUST00000190092 343 ntBASIC-0.22□□□□□ -2.44
Sdc4O35988 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC-0.22□□□□□ -2.44
Sdc4O35988 AC166358.7-201ENSMUST00000221132 108 ntBASIC-0.22□□□□□ -2.44
Sdc4O35988 AC125543.5-201ENSMUST00000222799 108 ntBASIC-0.22□□□□□ -2.44
Sdc4O35988 AC125311.1-201ENSMUST00000226950 220 ntBASIC-0.22□□□□□ -2.44
Sdc4O35988 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.22□□□□□ -2.44
Sdc4O35988 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
Sdc4O35988 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
Sdc4O35988 Gm24847-201ENSMUST00000158032 108 ntBASIC-0.23□□□□□ -2.45
Sdc4O35988 Gm23921-201ENSMUST00000175258 107 ntBASIC-0.23□□□□□ -2.45
Sdc4O35988 Gm24810-201ENSMUST00000175317 70 ntBASIC-0.23□□□□□ -2.45
Sdc4O35988 Gm10105-201ENSMUST00000184601 270 ntBASIC-0.23□□□□□ -2.45
Sdc4O35988 Gm44057-201ENSMUST00000204547 96 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 289.1 ms