Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm28808-201ENSMUST00000190978 313 ntBASIC1.76□□□□□ -2.13
Trim54Q9ERP3 Gm36189-201ENSMUST00000204113 523 ntBASIC1.76□□□□□ -2.13
Trim54Q9ERP3 Gm44057-201ENSMUST00000204547 96 ntBASIC1.76□□□□□ -2.13
Trim54Q9ERP3 Gm24375-201ENSMUST00000104397 132 ntBASIC1.75□□□□□ -2.13
Trim54Q9ERP3 Gm22621-201ENSMUST00000179678 74 ntBASIC1.75□□□□□ -2.13
Trim54Q9ERP3 Gm28344-201ENSMUST00000185704 279 ntBASIC1.75□□□□□ -2.13
Trim54Q9ERP3 Gm44325-201ENSMUST00000196757 77 ntBASIC1.75□□□□□ -2.13
Trim54Q9ERP3 Gm43199-201ENSMUST00000200019 307 ntBASIC1.75□□□□□ -2.13
Trim54Q9ERP3 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Gm25565-201ENSMUST00000104605 105 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Gm15115-201ENSMUST00000121145 264 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Gm25494-201ENSMUST00000158143 100 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Gm24415-201ENSMUST00000180218 107 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Gm45754-201ENSMUST00000212380 279 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Gm25697-201ENSMUST00000082902 98 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Gm24406-201ENSMUST00000083026 128 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.73□□□□□ -2.13
Trim54Q9ERP3 Gm23170-201ENSMUST00000157158 106 ntBASIC1.73□□□□□ -2.13
Trim54Q9ERP3 Gm22386-201ENSMUST00000158192 129 ntBASIC1.73□□□□□ -2.13
Trim54Q9ERP3 Gm28794-201ENSMUST00000185276 136 ntBASIC1.73□□□□□ -2.13
Trim54Q9ERP3 Gm37746-201ENSMUST00000193249 198 ntBASIC1.73□□□□□ -2.13
Trim54Q9ERP3 Gm44326-201ENSMUST00000198226 101 ntBASIC1.73□□□□□ -2.13
Trim54Q9ERP3 Gm44384-201ENSMUST00000200208 114 ntBASIC1.73□□□□□ -2.13
Trim54Q9ERP3 Mir466p-201ENSMUST00000103925 89 ntBASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Mir873a-201ENSMUST00000104863 77 ntBASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Gm25267-201ENSMUST00000158522 63 ntBASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Gm22259-201ENSMUST00000178926 107 ntBASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Gm21064-202ENSMUST00000190583 278 ntBASIC1.72□□□□□ -2.13
Trim54Q9ERP3 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Gm24165-201ENSMUST00000082718 128 ntBASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Snord14a-201ENSMUST00000082807 87 ntBASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Gm26004-201ENSMUST00000158804 116 ntBASIC1.71□□□□□ -2.14
Trim54Q9ERP3 Gm22686-201ENSMUST00000082847 100 ntBASIC1.71□□□□□ -2.14
Trim54Q9ERP3 Gm24762-201ENSMUST00000083689 104 ntBASIC1.71□□□□□ -2.14
Trim54Q9ERP3 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.71□□□□□ -2.14
Trim54Q9ERP3 Gm23718-201ENSMUST00000157350 307 ntBASIC1.7□□□□□ -2.14
Trim54Q9ERP3 Gm25423-201ENSMUST00000157609 107 ntBASIC1.7□□□□□ -2.14
Trim54Q9ERP3 Gm23898-201ENSMUST00000158111 103 ntBASIC1.7□□□□□ -2.14
Trim54Q9ERP3 Gm25223-201ENSMUST00000158200 110 ntBASIC1.7□□□□□ -2.14
Trim54Q9ERP3 Gm24229-201ENSMUST00000158830 118 ntBASIC1.7□□□□□ -2.14
Trim54Q9ERP3 Gm43602-201ENSMUST00000196772 300 ntBASIC1.7□□□□□ -2.14
Trim54Q9ERP3 Gm25895-201ENSMUST00000083714 100 ntBASIC1.7□□□□□ -2.14
Trim54Q9ERP3 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Trim54Q9ERP3 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.69□□□□□ -2.14
Trim54Q9ERP3 Gm22603-201ENSMUST00000157603 96 ntBASIC1.69□□□□□ -2.14
Trim54Q9ERP3 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trim54Q9ERP3 Gm22545-201ENSMUST00000104350 132 ntBASIC1.68□□□□□ -2.14
Trim54Q9ERP3 Gm6003-201ENSMUST00000187903 463 ntBASIC1.68□□□□□ -2.14
Trim54Q9ERP3 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.68□□□□□ -2.14
Trim54Q9ERP3 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.68□□□□□ -2.14
Trim54Q9ERP3 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Trim54Q9ERP3 Gm22082-201ENSMUST00000157587 161 ntBASIC1.67□□□□□ -2.14
Trim54Q9ERP3 Gm23558-201ENSMUST00000157823 80 ntBASIC1.67□□□□□ -2.14
Trim54Q9ERP3 Mir1931-201ENSMUST00000158589 119 ntBASIC1.67□□□□□ -2.14
Trim54Q9ERP3 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.67□□□□□ -2.14
Trim54Q9ERP3 Gm25958-201ENSMUST00000175114 71 ntBASIC1.67□□□□□ -2.14
Trim54Q9ERP3 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Trim54Q9ERP3 Gm28409-201ENSMUST00000187064 103 ntBASIC1.67□□□□□ -2.14
Trim54Q9ERP3 Gm24929-201ENSMUST00000083403 139 ntBASIC1.67□□□□□ -2.14
Trim54Q9ERP3 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
Trim54Q9ERP3 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Gm24132-201ENSMUST00000104745 91 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Gm22228-201ENSMUST00000157364 101 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Gm24634-201ENSMUST00000158672 107 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Gm24222-201ENSMUST00000158834 93 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Gm27326-201ENSMUST00000183504 95 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Mir7241-201ENSMUST00000184532 64 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Gm9251-201ENSMUST00000197202 628 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Mir490-201ENSMUST00000093567 84 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.65□□□□□ -2.15
Trim54Q9ERP3 Gm44853-201ENSMUST00000209070 250 ntBASIC1.65□□□□□ -2.15
Trim54Q9ERP3 Gm46993-201ENSMUST00000220708 259 ntBASIC1.65□□□□□ -2.15
Trim54Q9ERP3 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.65□□□□□ -2.15
Trim54Q9ERP3 Gm26293-201ENSMUST00000104170 84 ntBASIC1.64□□□□□ -2.15
Trim54Q9ERP3 Gm23122-201ENSMUST00000157645 103 ntBASIC1.64□□□□□ -2.15
Trim54Q9ERP3 Mir6351-201ENSMUST00000183826 99 ntBASIC1.64□□□□□ -2.15
Trim54Q9ERP3 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.64□□□□□ -2.15
Trim54Q9ERP3 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.64□□□□□ -2.15
Trim54Q9ERP3 Gm22306-201ENSMUST00000082692 107 ntBASIC1.64□□□□□ -2.15
Trim54Q9ERP3 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Gm24276-201ENSMUST00000102181 110 ntBASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Gm25068-201ENSMUST00000103895 110 ntBASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Gm23336-201ENSMUST00000117023 123 ntBASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Gm25558-201ENSMUST00000158083 106 ntBASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Gm27803-201ENSMUST00000183763 119 ntBASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Gm27493-201ENSMUST00000184128 78 ntBASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Gm27465-201ENSMUST00000184290 91 ntBASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Gm25038-201ENSMUST00000082928 130 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 143.9 ms