Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm22756-201ENSMUST00000180118 107 ntBASIC0.86□□□□□ -2.27
Lrif1Q8CDD9 Gm21088-201ENSMUST00000190875 316 ntBASIC0.86□□□□□ -2.27
Lrif1Q8CDD9 Gm22505-201ENSMUST00000082956 108 ntBASIC0.86□□□□□ -2.27
Lrif1Q8CDD9 Gm22363-201ENSMUST00000083100 108 ntBASIC0.86□□□□□ -2.27
Lrif1Q8CDD9 Gm23814-201ENSMUST00000083230 102 ntBASIC0.86□□□□□ -2.27
Lrif1Q8CDD9 Gm23095-201ENSMUST00000083446 107 ntBASIC0.86□□□□□ -2.27
Lrif1Q8CDD9 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.86□□□□□ -2.27
Lrif1Q8CDD9 Gm14568-201ENSMUST00000119321 294 ntBASIC0.85□□□□□ -2.27
Lrif1Q8CDD9 Gm13801-201ENSMUST00000120750 160 ntBASIC0.85□□□□□ -2.27
Lrif1Q8CDD9 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.85□□□□□ -2.27
Lrif1Q8CDD9 Gm24909-201ENSMUST00000157290 280 ntBASIC0.85□□□□□ -2.27
Lrif1Q8CDD9 Gm22515-201ENSMUST00000158273 305 ntBASIC0.85□□□□□ -2.27
Lrif1Q8CDD9 Gm25011-201ENSMUST00000158398 126 ntBASIC0.85□□□□□ -2.27
Lrif1Q8CDD9 Gm28579-201ENSMUST00000186143 369 ntBASIC0.85□□□□□ -2.27
Lrif1Q8CDD9 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Lrif1Q8CDD9 Gm7240-201ENSMUST00000220769 664 ntBASIC0.85□□□□□ -2.27
Lrif1Q8CDD9 mt-Tr-201ENSMUST00000082412 68 ntBASIC0.85□□□□□ -2.27
Lrif1Q8CDD9 Snora19-201ENSMUST00000082962 132 ntBASIC0.85□□□□□ -2.27
Lrif1Q8CDD9 Gm23658-201ENSMUST00000083233 132 ntBASIC0.85□□□□□ -2.27
Lrif1Q8CDD9 Gm24453-201ENSMUST00000083346 76 ntBASIC0.85□□□□□ -2.27
Lrif1Q8CDD9 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.85□□□□□ -2.27
Lrif1Q8CDD9 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Lrif1Q8CDD9 Gm25538-201ENSMUST00000101943 107 ntBASIC0.84□□□□□ -2.27
Lrif1Q8CDD9 Gm20391-201ENSMUST00000174722 106 ntBASIC0.84□□□□□ -2.27
Lrif1Q8CDD9 Mir669a-7-201ENSMUST00000180364 87 ntBASIC0.84□□□□□ -2.27
Lrif1Q8CDD9 Gm27521-201ENSMUST00000184022 64 ntBASIC0.84□□□□□ -2.27
Lrif1Q8CDD9 Gm38060-201ENSMUST00000194822 464 ntBASIC0.84□□□□□ -2.27
Lrif1Q8CDD9 Mir669a-6-201ENSMUST00000196127 87 ntBASIC0.84□□□□□ -2.27
Lrif1Q8CDD9 Mir669a-12-201ENSMUST00000197274 87 ntBASIC0.84□□□□□ -2.27
Lrif1Q8CDD9 Mir669a-5-201ENSMUST00000197439 87 ntBASIC0.84□□□□□ -2.27
Lrif1Q8CDD9 Mir669a-10-201ENSMUST00000197745 87 ntBASIC0.84□□□□□ -2.27
Lrif1Q8CDD9 Mir669a-11-201ENSMUST00000197952 87 ntBASIC0.84□□□□□ -2.27
Lrif1Q8CDD9 Mir669a-4-201ENSMUST00000198665 87 ntBASIC0.84□□□□□ -2.27
Lrif1Q8CDD9 Mir669a-9-201ENSMUST00000200087 87 ntBASIC0.84□□□□□ -2.27
Lrif1Q8CDD9 Mir669a-8-201ENSMUST00000200268 87 ntBASIC0.84□□□□□ -2.27
Lrif1Q8CDD9 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.84□□□□□ -2.27
Lrif1Q8CDD9 Gm45313-201ENSMUST00000210584 178 ntBASIC0.84□□□□□ -2.27
Lrif1Q8CDD9 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.84□□□□□ -2.27
Lrif1Q8CDD9 Snord35a-201ENSMUST00000083884 90 ntBASIC0.84□□□□□ -2.27
Lrif1Q8CDD9 Gm10222-201ENSMUST00000088336 294 ntBASIC0.84□□□□□ -2.27
Lrif1Q8CDD9 Gm22434-201ENSMUST00000158549 122 ntBASIC0.83□□□□□ -2.28
Lrif1Q8CDD9 Gm22450-201ENSMUST00000179641 107 ntBASIC0.83□□□□□ -2.28
Lrif1Q8CDD9 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.83□□□□□ -2.28
Lrif1Q8CDD9 Gm25473-201ENSMUST00000180191 107 ntBASIC0.83□□□□□ -2.28
Lrif1Q8CDD9 Mir6951-201ENSMUST00000183910 75 ntBASIC0.83□□□□□ -2.28
Lrif1Q8CDD9 Mir6540-201ENSMUST00000184886 108 ntBASIC0.83□□□□□ -2.28
Lrif1Q8CDD9 Gm43563-201ENSMUST00000196761 198 ntBASIC0.83□□□□□ -2.28
Lrif1Q8CDD9 Gm44396-201ENSMUST00000199843 114 ntBASIC0.83□□□□□ -2.28
Lrif1Q8CDD9 Gm44057-201ENSMUST00000204547 96 ntBASIC0.83□□□□□ -2.28
Lrif1Q8CDD9 Gm45508-201ENSMUST00000209298 299 ntBASIC0.83□□□□□ -2.28
Lrif1Q8CDD9 AL603630.1-201ENSMUST00000214781 147 ntBASIC0.83□□□□□ -2.28
Lrif1Q8CDD9 Gm24856-201ENSMUST00000082809 107 ntBASIC0.83□□□□□ -2.28
Lrif1Q8CDD9 Gm26071-201ENSMUST00000083261 107 ntBASIC0.83□□□□□ -2.28
Lrif1Q8CDD9 Gm24521-201ENSMUST00000083958 107 ntBASIC0.83□□□□□ -2.28
Lrif1Q8CDD9 Gm25949-201ENSMUST00000175333 114 ntBASIC0.82□□□□□ -2.28
Lrif1Q8CDD9 Gm22565-201ENSMUST00000175540 69 ntBASIC0.82□□□□□ -2.28
Lrif1Q8CDD9 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.82□□□□□ -2.28
Lrif1Q8CDD9 Mir448-201ENSMUST00000083516 112 ntBASIC0.82□□□□□ -2.28
Lrif1Q8CDD9 Gm25512-201ENSMUST00000083863 107 ntBASIC0.82□□□□□ -2.28
Lrif1Q8CDD9 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
Lrif1Q8CDD9 Mir654-201ENSMUST00000104787 84 ntBASIC0.81□□□□□ -2.28
Lrif1Q8CDD9 Gm13339-201ENSMUST00000120651 510 ntBASIC0.81□□□□□ -2.28
Lrif1Q8CDD9 Gm25783-201ENSMUST00000122525 190 ntBASIC0.81□□□□□ -2.28
Lrif1Q8CDD9 Gm22479-201ENSMUST00000122566 81 ntBASIC0.81□□□□□ -2.28
Lrif1Q8CDD9 Gm22216-201ENSMUST00000157557 114 ntBASIC0.81□□□□□ -2.28
Lrif1Q8CDD9 Gm22553-201ENSMUST00000157797 295 ntBASIC0.81□□□□□ -2.28
Lrif1Q8CDD9 Gm25166-201ENSMUST00000158909 111 ntBASIC0.81□□□□□ -2.28
Lrif1Q8CDD9 Gm25838-201ENSMUST00000158920 120 ntBASIC0.81□□□□□ -2.28
Lrif1Q8CDD9 Gm27365-201ENSMUST00000184041 177 ntBASIC0.81□□□□□ -2.28
Lrif1Q8CDD9 Mir6394-201ENSMUST00000184738 99 ntBASIC0.81□□□□□ -2.28
Lrif1Q8CDD9 Gm27587-201ENSMUST00000185116 163 ntBASIC0.81□□□□□ -2.28
Lrif1Q8CDD9 Gm44301-201ENSMUST00000200362 143 ntBASIC0.81□□□□□ -2.28
Lrif1Q8CDD9 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.81□□□□□ -2.28
Lrif1Q8CDD9 Gm11904-201ENSMUST00000120562 248 ntBASIC0.8□□□□□ -2.28
Lrif1Q8CDD9 Gm24401-201ENSMUST00000157868 91 ntBASIC0.8□□□□□ -2.28
Lrif1Q8CDD9 Gm27974-201ENSMUST00000183415 105 ntBASIC0.8□□□□□ -2.28
Lrif1Q8CDD9 Gm28669-201ENSMUST00000188400 100 ntBASIC0.8□□□□□ -2.28
Lrif1Q8CDD9 Gm38323-201ENSMUST00000192450 210 ntBASIC0.8□□□□□ -2.28
Lrif1Q8CDD9 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC0.8□□□□□ -2.28
Lrif1Q8CDD9 Gm25855-201ENSMUST00000082787 72 ntBASIC0.8□□□□□ -2.28
Lrif1Q8CDD9 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.79□□□□□ -2.28
Lrif1Q8CDD9 Gm24000-201ENSMUST00000158063 89 ntBASIC0.79□□□□□ -2.28
Lrif1Q8CDD9 Gm25558-201ENSMUST00000158083 106 ntBASIC0.79□□□□□ -2.28
Lrif1Q8CDD9 Gm22200-201ENSMUST00000158614 67 ntBASIC0.79□□□□□ -2.28
Lrif1Q8CDD9 Gm26287-201ENSMUST00000158887 81 ntBASIC0.79□□□□□ -2.28
Lrif1Q8CDD9 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.79□□□□□ -2.28
Lrif1Q8CDD9 Gm22914-201ENSMUST00000175195 77 ntBASIC0.79□□□□□ -2.28
Lrif1Q8CDD9 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Lrif1Q8CDD9 Gm38183-201ENSMUST00000193189 205 ntBASIC0.79□□□□□ -2.28
Lrif1Q8CDD9 Gm42533-201ENSMUST00000196247 157 ntBASIC0.79□□□□□ -2.28
Lrif1Q8CDD9 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.79□□□□□ -2.28
Lrif1Q8CDD9 Gm24311-201ENSMUST00000082570 104 ntBASIC0.79□□□□□ -2.28
Lrif1Q8CDD9 Mir181a-2-201ENSMUST00000083489 76 ntBASIC0.79□□□□□ -2.28
Lrif1Q8CDD9 Gm24764-201ENSMUST00000083686 199 ntBASIC0.79□□□□□ -2.28
Lrif1Q8CDD9 Gm23345-201ENSMUST00000083817 150 ntBASIC0.79□□□□□ -2.28
Lrif1Q8CDD9 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.78□□□□□ -2.28
Lrif1Q8CDD9 Gm23130-201ENSMUST00000104252 74 ntBASIC0.78□□□□□ -2.28
Lrif1Q8CDD9 Gm22544-201ENSMUST00000104349 127 ntBASIC0.78□□□□□ -2.28
Lrif1Q8CDD9 Gm25024-201ENSMUST00000179667 104 ntBASIC0.78□□□□□ -2.28
Lrif1Q8CDD9 Gm42506-201ENSMUST00000202009 150 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 219.3 ms