Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Gm6025-201ENSMUST00000121517 201 ntBASIC1.43□□□□□ -2.18
Tdp1Q8BJ37 Gm26279-201ENSMUST00000157095 102 ntBASIC1.43□□□□□ -2.18
Tdp1Q8BJ37 Gm23901-201ENSMUST00000157570 107 ntBASIC1.43□□□□□ -2.18
Tdp1Q8BJ37 Gm23584-201ENSMUST00000157655 129 ntBASIC1.43□□□□□ -2.18
Tdp1Q8BJ37 Gm42719-201ENSMUST00000197393 355 ntBASIC1.43□□□□□ -2.18
Tdp1Q8BJ37 AL929417.1-201ENSMUST00000214901 124 ntBASIC1.43□□□□□ -2.18
Tdp1Q8BJ37 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.43□□□□□ -2.18
Tdp1Q8BJ37 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.43□□□□□ -2.18
Tdp1Q8BJ37 Mir211-201ENSMUST00000083651 106 ntBASIC1.43□□□□□ -2.18
Tdp1Q8BJ37 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Tdp1Q8BJ37 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Gm24640-201ENSMUST00000116949 126 ntBASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Gm22626-201ENSMUST00000116990 126 ntBASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Gm25783-201ENSMUST00000122525 190 ntBASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Gm24895-201ENSMUST00000122742 74 ntBASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Gm23328-201ENSMUST00000157418 132 ntBASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Gm22963-201ENSMUST00000157960 91 ntBASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Gm23545-201ENSMUST00000158205 104 ntBASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Gm23208-201ENSMUST00000158666 127 ntBASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Gm25976-201ENSMUST00000158695 130 ntBASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Gm24761-201ENSMUST00000179589 127 ntBASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Gm22621-201ENSMUST00000179678 74 ntBASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Gm24488-201ENSMUST00000179934 127 ntBASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Gm25701-201ENSMUST00000179988 127 ntBASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Gm26431-201ENSMUST00000180199 127 ntBASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Gm38183-201ENSMUST00000193189 205 ntBASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Gm25142-201ENSMUST00000082698 107 ntBASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Gm23100-201ENSMUST00000083455 141 ntBASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Gm24252-201ENSMUST00000083700 132 ntBASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Gm24261-201ENSMUST00000083744 104 ntBASIC1.42□□□□□ -2.18
Tdp1Q8BJ37 Mir223-201ENSMUST00000102112 110 ntBASIC1.41□□□□□ -2.18
Tdp1Q8BJ37 Gm25035-201ENSMUST00000175414 77 ntBASIC1.41□□□□□ -2.18
Tdp1Q8BJ37 Mir669k-201ENSMUST00000177742 127 ntBASIC1.41□□□□□ -2.18
Tdp1Q8BJ37 Gm25935-201ENSMUST00000178746 107 ntBASIC1.41□□□□□ -2.18
Tdp1Q8BJ37 Gm25730-201ENSMUST00000178753 165 ntBASIC1.41□□□□□ -2.18
Tdp1Q8BJ37 Gm25673-201ENSMUST00000179957 127 ntBASIC1.41□□□□□ -2.18
Tdp1Q8BJ37 Gm24415-201ENSMUST00000180218 107 ntBASIC1.41□□□□□ -2.18
Tdp1Q8BJ37 Mir8119-201ENSMUST00000183371 129 ntBASIC1.41□□□□□ -2.18
Tdp1Q8BJ37 Gm28537-201ENSMUST00000189026 315 ntBASIC1.41□□□□□ -2.18
Tdp1Q8BJ37 Gm29631-201ENSMUST00000191065 315 ntBASIC1.41□□□□□ -2.18
Tdp1Q8BJ37 Gm44384-201ENSMUST00000200208 114 ntBASIC1.41□□□□□ -2.18
Tdp1Q8BJ37 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.41□□□□□ -2.18
Tdp1Q8BJ37 Mir196b-201ENSMUST00000083509 85 ntBASIC1.41□□□□□ -2.18
Tdp1Q8BJ37 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.41□□□□□ -2.18
Tdp1Q8BJ37 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Tdp1Q8BJ37 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.4□□□□□ -2.19
Tdp1Q8BJ37 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.4□□□□□ -2.19
Tdp1Q8BJ37 Gm24222-201ENSMUST00000158834 93 ntBASIC1.4□□□□□ -2.19
Tdp1Q8BJ37 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.4□□□□□ -2.19
Tdp1Q8BJ37 Gm24366-201ENSMUST00000175383 86 ntBASIC1.4□□□□□ -2.19
Tdp1Q8BJ37 Gm28344-201ENSMUST00000185704 279 ntBASIC1.4□□□□□ -2.19
Tdp1Q8BJ37 Gm44325-201ENSMUST00000196757 77 ntBASIC1.4□□□□□ -2.19
Tdp1Q8BJ37 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Tdp1Q8BJ37 Gm44052-201ENSMUST00000203382 396 ntBASIC1.4□□□□□ -2.19
Tdp1Q8BJ37 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC1.4□□□□□ -2.19
Tdp1Q8BJ37 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.4□□□□□ -2.19
Tdp1Q8BJ37 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.4□□□□□ -2.19
Tdp1Q8BJ37 Gm22744-201ENSMUST00000083444 65 ntBASIC1.4□□□□□ -2.19
Tdp1Q8BJ37 Gm25409-201ENSMUST00000083764 131 ntBASIC1.4□□□□□ -2.19
Tdp1Q8BJ37 Gm24375-201ENSMUST00000104397 132 ntBASIC1.39□□□□□ -2.19
Tdp1Q8BJ37 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.39□□□□□ -2.19
Tdp1Q8BJ37 Gm12309-201ENSMUST00000119889 182 ntBASIC1.39□□□□□ -2.19
Tdp1Q8BJ37 Gm23113-201ENSMUST00000158477 99 ntBASIC1.39□□□□□ -2.19
Tdp1Q8BJ37 Gm44326-201ENSMUST00000198226 101 ntBASIC1.39□□□□□ -2.19
Tdp1Q8BJ37 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.39□□□□□ -2.19
Tdp1Q8BJ37 Gm25627-201ENSMUST00000084003 153 ntBASIC1.39□□□□□ -2.19
Tdp1Q8BJ37 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.39□□□□□ -2.19
Tdp1Q8BJ37 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Tdp1Q8BJ37 Mir466p-201ENSMUST00000103925 89 ntBASIC1.38□□□□□ -2.19
Tdp1Q8BJ37 Snord89-201ENSMUST00000104516 110 ntBASIC1.38□□□□□ -2.19
Tdp1Q8BJ37 Gm22051-201ENSMUST00000117002 127 ntBASIC1.38□□□□□ -2.19
Tdp1Q8BJ37 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.38□□□□□ -2.19
Tdp1Q8BJ37 Gm22586-201ENSMUST00000157507 122 ntBASIC1.38□□□□□ -2.19
Tdp1Q8BJ37 Gm22767-201ENSMUST00000158365 165 ntBASIC1.38□□□□□ -2.19
Tdp1Q8BJ37 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Tdp1Q8BJ37 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Tdp1Q8BJ37 Gm21064-202ENSMUST00000190583 278 ntBASIC1.38□□□□□ -2.19
Tdp1Q8BJ37 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Tdp1Q8BJ37 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.38□□□□□ -2.19
Tdp1Q8BJ37 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.38□□□□□ -2.19
Tdp1Q8BJ37 Gm25697-201ENSMUST00000082902 98 ntBASIC1.38□□□□□ -2.19
Tdp1Q8BJ37 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.37□□□□□ -2.19
Tdp1Q8BJ37 Gm25943-201ENSMUST00000103791 90 ntBASIC1.37□□□□□ -2.19
Tdp1Q8BJ37 Mir466b-7-201ENSMUST00000103804 88 ntBASIC1.37□□□□□ -2.19
Tdp1Q8BJ37 Mir466b-5-201ENSMUST00000103900 88 ntBASIC1.37□□□□□ -2.19
Tdp1Q8BJ37 Gm25565-201ENSMUST00000104605 105 ntBASIC1.37□□□□□ -2.19
Tdp1Q8BJ37 Gm16032-201ENSMUST00000118534 168 ntBASIC1.37□□□□□ -2.19
Tdp1Q8BJ37 Gm12771-201ENSMUST00000120246 135 ntBASIC1.37□□□□□ -2.19
Tdp1Q8BJ37 Gm23655-201ENSMUST00000122627 105 ntBASIC1.37□□□□□ -2.19
Tdp1Q8BJ37 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.37□□□□□ -2.19
Tdp1Q8BJ37 Gm25834-201ENSMUST00000158916 101 ntBASIC1.37□□□□□ -2.19
Tdp1Q8BJ37 Mir466b-4-201ENSMUST00000178801 90 ntBASIC1.37□□□□□ -2.19
Tdp1Q8BJ37 Gm22259-201ENSMUST00000178926 107 ntBASIC1.37□□□□□ -2.19
Tdp1Q8BJ37 Gm25285-201ENSMUST00000178951 90 ntBASIC1.37□□□□□ -2.19
Tdp1Q8BJ37 Mir466b-6-201ENSMUST00000180061 90 ntBASIC1.37□□□□□ -2.19
Tdp1Q8BJ37 Mir466c-2-201ENSMUST00000180211 90 ntBASIC1.37□□□□□ -2.19
Tdp1Q8BJ37 Mir7241-201ENSMUST00000184532 64 ntBASIC1.37□□□□□ -2.19
Tdp1Q8BJ37 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.37□□□□□ -2.19
Tdp1Q8BJ37 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Tdp1Q8BJ37 Gm26293-201ENSMUST00000104170 84 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 177 ms