Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trim56Q80VI1 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trim56Q80VI1 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trim56Q80VI1 Gm26074-201ENSMUST00000104063 129 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.81□□□□□ -1.96
Trim56Q80VI1 Gm2830-201ENSMUST00000140330 385 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Gm25889-201ENSMUST00000157775 107 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Gm23223-201ENSMUST00000158119 127 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Gm25380-201ENSMUST00000175463 107 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Gm24641-201ENSMUST00000178055 107 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Gm25484-201ENSMUST00000178217 107 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Gm26138-201ENSMUST00000179236 107 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Gm22821-201ENSMUST00000179288 107 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Gm27792-201ENSMUST00000184031 115 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Mir6376-201ENSMUST00000185149 131 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Gm28669-201ENSMUST00000188400 100 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Mir497-201ENSMUST00000200557 84 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 AC147101.2-201ENSMUST00000219756 184 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Gm23140-201ENSMUST00000082487 107 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Gm23298-201ENSMUST00000083181 107 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Gm24614-201ENSMUST00000083269 107 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Gm22057-201ENSMUST00000083387 107 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Mir369-201ENSMUST00000083627 79 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Gm25516-201ENSMUST00000083857 107 ntBASIC2.81□□□□□ -1.96
Trim56Q80VI1 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Trim56Q80VI1 Gm26081-201ENSMUST00000104068 132 ntBASIC2.8□□□□□ -1.96
Trim56Q80VI1 Gm13588-201ENSMUST00000120026 135 ntBASIC2.8□□□□□ -1.96
Trim56Q80VI1 Gm24771-201ENSMUST00000158508 137 ntBASIC2.8□□□□□ -1.96
Trim56Q80VI1 Gm25444-201ENSMUST00000158999 113 ntBASIC2.8□□□□□ -1.96
Trim56Q80VI1 Gm42844-201ENSMUST00000200355 112 ntBASIC2.8□□□□□ -1.96
Trim56Q80VI1 Mir34a-201ENSMUST00000083559 102 ntBASIC2.8□□□□□ -1.96
Trim56Q80VI1 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Trim56Q80VI1 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Trim56Q80VI1 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Trim56Q80VI1 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.79□□□□□ -1.96
Trim56Q80VI1 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.79□□□□□ -1.96
Trim56Q80VI1 Gm25526-201ENSMUST00000104332 132 ntBASIC2.79□□□□□ -1.96
Trim56Q80VI1 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.79□□□□□ -1.96
Trim56Q80VI1 Gm12086-201ENSMUST00000120863 228 ntBASIC2.79□□□□□ -1.96
Trim56Q80VI1 Gm23980-201ENSMUST00000157135 158 ntBASIC2.79□□□□□ -1.96
Trim56Q80VI1 Gm22558-201ENSMUST00000157326 95 ntBASIC2.79□□□□□ -1.96
Trim56Q80VI1 Gm23859-201ENSMUST00000158383 64 ntBASIC2.79□□□□□ -1.96
Trim56Q80VI1 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.79□□□□□ -1.96
Trim56Q80VI1 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.79□□□□□ -1.96
Trim56Q80VI1 Gm23509-201ENSMUST00000083080 160 ntBASIC2.79□□□□□ -1.96
Trim56Q80VI1 Gm25627-201ENSMUST00000084003 153 ntBASIC2.79□□□□□ -1.96
Trim56Q80VI1 Gm42718-201ENSMUST00000197319 2681 ntBASIC2.78□□□□□ -1.96
Trim56Q80VI1 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trim56Q80VI1 Gm14568-201ENSMUST00000119321 294 ntBASIC2.78□□□□□ -1.96
Trim56Q80VI1 Gm14937-201ENSMUST00000119709 208 ntBASIC2.78□□□□□ -1.96
Trim56Q80VI1 Gm24937-201ENSMUST00000122597 134 ntBASIC2.78□□□□□ -1.96
Trim56Q80VI1 Gm23390-201ENSMUST00000157393 106 ntBASIC2.78□□□□□ -1.96
Trim56Q80VI1 Gm22338-201ENSMUST00000157715 129 ntBASIC2.78□□□□□ -1.96
Trim56Q80VI1 Gm22665-201ENSMUST00000158720 275 ntBASIC2.78□□□□□ -1.96
Trim56Q80VI1 Gm23963-201ENSMUST00000179603 77 ntBASIC2.78□□□□□ -1.96
Trim56Q80VI1 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Trim56Q80VI1 Trbv7-201ENSMUST00000193339 402 ntBASIC2.78□□□□□ -1.96
Trim56Q80VI1 Gm24038-201ENSMUST00000082872 159 ntBASIC2.78□□□□□ -1.96
Trim56Q80VI1 Mir301-201ENSMUST00000083655 86 ntBASIC2.78□□□□□ -1.96
Trim56Q80VI1 Gm25684-201ENSMUST00000083941 107 ntBASIC2.78□□□□□ -1.96
Trim56Q80VI1 Mir127-201ENSMUST00000093568 70 ntBASIC2.78□□□□□ -1.96
Trim56Q80VI1 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.77□□□□□ -1.97
Trim56Q80VI1 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trim56Q80VI1 Gm44489-201ENSMUST00000104619 97 ntBASIC2.77□□□□□ -1.97
Trim56Q80VI1 Gm22151-201ENSMUST00000116963 58 ntBASIC2.77□□□□□ -1.97
Trim56Q80VI1 Gm15289-201ENSMUST00000117793 244 ntBASIC2.77□□□□□ -1.97
Trim56Q80VI1 Gm14709-201ENSMUST00000121225 304 ntBASIC2.77□□□□□ -1.97
Trim56Q80VI1 Gm15281-201ENSMUST00000125181 351 ntBASIC2.77□□□□□ -1.97
Trim56Q80VI1 Gm22163-201ENSMUST00000158408 135 ntBASIC2.77□□□□□ -1.97
Trim56Q80VI1 Mir8090-201ENSMUST00000185078 136 ntBASIC2.77□□□□□ -1.97
Trim56Q80VI1 Mir6925-201ENSMUST00000197857 70 ntBASIC2.77□□□□□ -1.97
Trim56Q80VI1 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.77□□□□□ -1.97
Trim56Q80VI1 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.77□□□□□ -1.97
Trim56Q80VI1 Gm25628-201ENSMUST00000084002 105 ntBASIC2.77□□□□□ -1.97
Trim56Q80VI1 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.77□□□□□ -1.97
Trim56Q80VI1 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.77□□□□□ -1.97
Trim56Q80VI1 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Trim56Q80VI1 Gm25878-201ENSMUST00000104327 93 ntBASIC2.76□□□□□ -1.97
Trim56Q80VI1 Gm22664-201ENSMUST00000158719 105 ntBASIC2.76□□□□□ -1.97
Trim56Q80VI1 Mir7068-201ENSMUST00000183439 74 ntBASIC2.76□□□□□ -1.97
Trim56Q80VI1 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.76□□□□□ -1.97
Trim56Q80VI1 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Trim56Q80VI1 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Trim56Q80VI1 Gm14946-201ENSMUST00000119859 296 ntBASIC2.75□□□□□ -1.97
Trim56Q80VI1 Gm25769-201ENSMUST00000158569 127 ntBASIC2.75□□□□□ -1.97
Trim56Q80VI1 Gm22416-201ENSMUST00000158590 88 ntBASIC2.75□□□□□ -1.97
Trim56Q80VI1 Gm24842-201ENSMUST00000158681 54 ntBASIC2.75□□□□□ -1.97
Trim56Q80VI1 Gm25119-201ENSMUST00000158815 88 ntBASIC2.75□□□□□ -1.97
Trim56Q80VI1 Gm25707-201ENSMUST00000175120 96 ntBASIC2.75□□□□□ -1.97
Trim56Q80VI1 Mir3075-201ENSMUST00000175340 85 ntBASIC2.75□□□□□ -1.97
Trim56Q80VI1 Gm24246-201ENSMUST00000157315 132 ntBASIC2.74□□□□□ -1.97
Trim56Q80VI1 Gm22387-201ENSMUST00000158191 131 ntBASIC2.74□□□□□ -1.97
Trim56Q80VI1 Gm23854-201ENSMUST00000158378 108 ntBASIC2.74□□□□□ -1.97
Trim56Q80VI1 Gm25771-201ENSMUST00000158565 144 ntBASIC2.74□□□□□ -1.97
Trim56Q80VI1 Mir6905-201ENSMUST00000184228 70 ntBASIC2.74□□□□□ -1.97
Trim56Q80VI1 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.74□□□□□ -1.97
Trim56Q80VI1 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 186 ms