Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm43749-201ENSMUST00000199345 352 ntBASIC2.18□□□□□ -2.06
Ddx55Q6ZPL9 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.18□□□□□ -2.06
Ddx55Q6ZPL9 Gm24044-201ENSMUST00000083107 156 ntBASIC2.18□□□□□ -2.06
Ddx55Q6ZPL9 Mir151-201ENSMUST00000083678 68 ntBASIC2.18□□□□□ -2.06
Ddx55Q6ZPL9 Gm25323-201ENSMUST00000122555 103 ntBASIC2.17□□□□□ -2.06
Ddx55Q6ZPL9 Gm22477-201ENSMUST00000122569 316 ntBASIC2.17□□□□□ -2.06
Ddx55Q6ZPL9 Gm25428-201ENSMUST00000157608 114 ntBASIC2.17□□□□□ -2.06
Ddx55Q6ZPL9 Gm22850-201ENSMUST00000157714 82 ntBASIC2.17□□□□□ -2.06
Ddx55Q6ZPL9 Gm26004-201ENSMUST00000158804 116 ntBASIC2.17□□□□□ -2.06
Ddx55Q6ZPL9 Gm23714-201ENSMUST00000179259 105 ntBASIC2.17□□□□□ -2.06
Ddx55Q6ZPL9 Gm27979-201ENSMUST00000185126 56 ntBASIC2.17□□□□□ -2.06
Ddx55Q6ZPL9 Gm18213-201ENSMUST00000207850 178 ntBASIC2.17□□□□□ -2.06
Ddx55Q6ZPL9 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Ddx55Q6ZPL9 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Ddx55Q6ZPL9 Gm22761-201ENSMUST00000102278 96 ntBASIC2.16□□□□□ -2.06
Ddx55Q6ZPL9 Gm13345-201ENSMUST00000121928 228 ntBASIC2.16□□□□□ -2.06
Ddx55Q6ZPL9 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Ddx55Q6ZPL9 Mir6350-201ENSMUST00000183639 105 ntBASIC2.16□□□□□ -2.06
Ddx55Q6ZPL9 Gm38364-201ENSMUST00000191814 179 ntBASIC2.16□□□□□ -2.06
Ddx55Q6ZPL9 Gm42719-201ENSMUST00000197393 355 ntBASIC2.16□□□□□ -2.06
Ddx55Q6ZPL9 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC2.16□□□□□ -2.06
Ddx55Q6ZPL9 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.16□□□□□ -2.06
Ddx55Q6ZPL9 Gm25627-201ENSMUST00000084003 153 ntBASIC2.16□□□□□ -2.06
Ddx55Q6ZPL9 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.15□□□□□ -2.07
Ddx55Q6ZPL9 Gm14937-201ENSMUST00000119709 208 ntBASIC2.15□□□□□ -2.07
Ddx55Q6ZPL9 Gm22554-201ENSMUST00000157798 147 ntBASIC2.15□□□□□ -2.07
Ddx55Q6ZPL9 Mir1966-201ENSMUST00000158807 108 ntBASIC2.15□□□□□ -2.07
Ddx55Q6ZPL9 Gm25368-201ENSMUST00000158847 131 ntBASIC2.15□□□□□ -2.07
Ddx55Q6ZPL9 Gm22699-201ENSMUST00000175376 105 ntBASIC2.15□□□□□ -2.07
Ddx55Q6ZPL9 Gm25994-201ENSMUST00000175392 101 ntBASIC2.15□□□□□ -2.07
Ddx55Q6ZPL9 Gm24261-201ENSMUST00000083744 104 ntBASIC2.15□□□□□ -2.07
Ddx55Q6ZPL9 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.15□□□□□ -2.07
Ddx55Q6ZPL9 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
Ddx55Q6ZPL9 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Ddx55Q6ZPL9 Gm26339-201ENSMUST00000102368 99 ntBASIC2.14□□□□□ -2.07
Ddx55Q6ZPL9 Mir1298-201ENSMUST00000116681 98 ntBASIC2.14□□□□□ -2.07
Ddx55Q6ZPL9 Gm23656-201ENSMUST00000122626 112 ntBASIC2.14□□□□□ -2.07
Ddx55Q6ZPL9 Mir1949-201ENSMUST00000157434 141 ntBASIC2.14□□□□□ -2.07
Ddx55Q6ZPL9 Mir21b-201ENSMUST00000184317 108 ntBASIC2.14□□□□□ -2.07
Ddx55Q6ZPL9 Gm37557-201ENSMUST00000191640 139 ntBASIC2.14□□□□□ -2.07
Ddx55Q6ZPL9 Mir7021-201ENSMUST00000197026 63 ntBASIC2.14□□□□□ -2.07
Ddx55Q6ZPL9 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Ddx55Q6ZPL9 Gm44921-201ENSMUST00000205290 301 ntBASIC2.14□□□□□ -2.07
Ddx55Q6ZPL9 AC150901.1-201ENSMUST00000208407 145 ntBASIC2.14□□□□□ -2.07
Ddx55Q6ZPL9 Gm25081-201ENSMUST00000082534 108 ntBASIC2.14□□□□□ -2.07
Ddx55Q6ZPL9 Mir34a-201ENSMUST00000083559 102 ntBASIC2.14□□□□□ -2.07
Ddx55Q6ZPL9 Mir488-201ENSMUST00000093595 109 ntBASIC2.14□□□□□ -2.07
Ddx55Q6ZPL9 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.13□□□□□ -2.07
Ddx55Q6ZPL9 Gm23813-201ENSMUST00000175153 77 ntBASIC2.13□□□□□ -2.07
Ddx55Q6ZPL9 Gm28409-201ENSMUST00000187064 103 ntBASIC2.13□□□□□ -2.07
Ddx55Q6ZPL9 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Ddx55Q6ZPL9 Gm37116-201ENSMUST00000195161 147 ntBASIC2.13□□□□□ -2.07
Ddx55Q6ZPL9 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.13□□□□□ -2.07
Ddx55Q6ZPL9 CT030645.1-201ENSMUST00000224020 231 ntBASIC2.13□□□□□ -2.07
Ddx55Q6ZPL9 Snora3-201ENSMUST00000083082 132 ntBASIC2.13□□□□□ -2.07
Ddx55Q6ZPL9 Gm24412-201ENSMUST00000083426 109 ntBASIC2.13□□□□□ -2.07
Ddx55Q6ZPL9 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Ddx55Q6ZPL9 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Ddx55Q6ZPL9 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Ddx55Q6ZPL9 Gm26080-201ENSMUST00000104069 131 ntBASIC2.12□□□□□ -2.07
Ddx55Q6ZPL9 Gm26360-201ENSMUST00000158872 103 ntBASIC2.12□□□□□ -2.07
Ddx55Q6ZPL9 Gm5900-201ENSMUST00000179862 375 ntBASIC2.12□□□□□ -2.07
Ddx55Q6ZPL9 Gm9251-201ENSMUST00000197202 628 ntBASIC2.12□□□□□ -2.07
Ddx55Q6ZPL9 Gm42623-201ENSMUST00000197225 379 ntBASIC2.12□□□□□ -2.07
Ddx55Q6ZPL9 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.12□□□□□ -2.07
Ddx55Q6ZPL9 Gm22306-201ENSMUST00000082692 107 ntBASIC2.12□□□□□ -2.07
Ddx55Q6ZPL9 Mir30d-201ENSMUST00000083503 82 ntBASIC2.12□□□□□ -2.07
Ddx55Q6ZPL9 Snord100-201ENSMUST00000116836 74 ntBASIC2.11□□□□□ -2.07
Ddx55Q6ZPL9 Gm15069-201ENSMUST00000117792 192 ntBASIC2.11□□□□□ -2.07
Ddx55Q6ZPL9 Gm15068-201ENSMUST00000119796 192 ntBASIC2.11□□□□□ -2.07
Ddx55Q6ZPL9 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.11□□□□□ -2.07
Ddx55Q6ZPL9 Gm25828-201ENSMUST00000157087 95 ntBASIC2.11□□□□□ -2.07
Ddx55Q6ZPL9 Gm23350-201ENSMUST00000158429 103 ntBASIC2.11□□□□□ -2.07
Ddx55Q6ZPL9 Gm22139-201ENSMUST00000158747 105 ntBASIC2.11□□□□□ -2.07
Ddx55Q6ZPL9 Gm27722-201ENSMUST00000183908 76 ntBASIC2.11□□□□□ -2.07
Ddx55Q6ZPL9 Gm37778-201ENSMUST00000191732 190 ntBASIC2.11□□□□□ -2.07
Ddx55Q6ZPL9 Gm44325-201ENSMUST00000196757 77 ntBASIC2.11□□□□□ -2.07
Ddx55Q6ZPL9 Gm25697-201ENSMUST00000082902 98 ntBASIC2.11□□□□□ -2.07
Ddx55Q6ZPL9 Mir107-201ENSMUST00000083660 87 ntBASIC2.11□□□□□ -2.07
Ddx55Q6ZPL9 Snora33-201ENSMUST00000093556 129 ntBASIC2.11□□□□□ -2.07
Ddx55Q6ZPL9 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
Ddx55Q6ZPL9 Gm13246-201ENSMUST00000120994 315 ntBASIC2.1□□□□□ -2.07
Ddx55Q6ZPL9 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.1□□□□□ -2.07
Ddx55Q6ZPL9 Gm23469-201ENSMUST00000157131 104 ntBASIC2.1□□□□□ -2.07
Ddx55Q6ZPL9 Gm27672-201ENSMUST00000183751 204 ntBASIC2.1□□□□□ -2.07
Ddx55Q6ZPL9 Gm28537-201ENSMUST00000189026 315 ntBASIC2.1□□□□□ -2.07
Ddx55Q6ZPL9 Gm29631-201ENSMUST00000191065 315 ntBASIC2.1□□□□□ -2.07
Ddx55Q6ZPL9 Gm42988-201ENSMUST00000198116 225 ntBASIC2.1□□□□□ -2.07
Ddx55Q6ZPL9 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.1□□□□□ -2.07
Ddx55Q6ZPL9 Gm25068-201ENSMUST00000103895 110 ntBASIC2.09□□□□□ -2.07
Ddx55Q6ZPL9 Gm23653-201ENSMUST00000116751 97 ntBASIC2.09□□□□□ -2.07
Ddx55Q6ZPL9 Gm23898-201ENSMUST00000158111 103 ntBASIC2.09□□□□□ -2.07
Ddx55Q6ZPL9 Gm22163-201ENSMUST00000158408 135 ntBASIC2.09□□□□□ -2.07
Ddx55Q6ZPL9 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.09□□□□□ -2.07
Ddx55Q6ZPL9 Gm28669-201ENSMUST00000188400 100 ntBASIC2.09□□□□□ -2.07
Ddx55Q6ZPL9 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.09□□□□□ -2.07
Ddx55Q6ZPL9 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Ddx55Q6ZPL9 Gm24171-201ENSMUST00000104126 131 ntBASIC2.08□□□□□ -2.08
Ddx55Q6ZPL9 Gm14567-201ENSMUST00000117155 174 ntBASIC2.08□□□□□ -2.08
Ddx55Q6ZPL9 Gm25558-201ENSMUST00000158083 106 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 136.1 ms