Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.42□□□□□ -2.34
Col27a1Q5QNQ9 Mir30a-201ENSMUST00000083471 71 ntBASIC0.42□□□□□ -2.34
Col27a1Q5QNQ9 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Col27a1Q5QNQ9 Mir695-201ENSMUST00000102261 109 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm24375-201ENSMUST00000104397 132 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm14301-201ENSMUST00000120181 324 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm22199-201ENSMUST00000122660 126 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm24385-201ENSMUST00000122694 350 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm24847-201ENSMUST00000158032 108 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm26022-201ENSMUST00000158663 108 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm20257-202ENSMUST00000188643 130 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm36956-201ENSMUST00000193830 214 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm42719-201ENSMUST00000197393 355 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm45313-201ENSMUST00000210584 178 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm25578-201ENSMUST00000083406 104 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm25378-201ENSMUST00000104333 129 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm22021-201ENSMUST00000104353 107 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm24504-201ENSMUST00000157679 100 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm22085-201ENSMUST00000158344 110 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Mir6904-201ENSMUST00000183443 67 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm28849-201ENSMUST00000188127 174 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm20923-201ENSMUST00000190009 319 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm28330-201ENSMUST00000190353 171 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm21088-201ENSMUST00000190875 316 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.41□□□□□ -2.34
Col27a1Q5QNQ9 Gm22786-201ENSMUST00000104086 122 ntBASIC0.4□□□□□ -2.35
Col27a1Q5QNQ9 Gm15379-201ENSMUST00000121224 648 ntBASIC0.4□□□□□ -2.35
Col27a1Q5QNQ9 Gm12785-201ENSMUST00000122052 172 ntBASIC0.4□□□□□ -2.35
Col27a1Q5QNQ9 Gm24595-201ENSMUST00000122501 110 ntBASIC0.4□□□□□ -2.35
Col27a1Q5QNQ9 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.4□□□□□ -2.35
Col27a1Q5QNQ9 Gm45508-201ENSMUST00000209298 299 ntBASIC0.4□□□□□ -2.35
Col27a1Q5QNQ9 AC166358.7-201ENSMUST00000221132 108 ntBASIC0.4□□□□□ -2.35
Col27a1Q5QNQ9 AC125543.5-201ENSMUST00000222799 108 ntBASIC0.4□□□□□ -2.35
Col27a1Q5QNQ9 Gm26338-201ENSMUST00000102372 110 ntBASIC0.39□□□□□ -2.35
Col27a1Q5QNQ9 Gm16032-201ENSMUST00000118534 168 ntBASIC0.39□□□□□ -2.35
Col27a1Q5QNQ9 Gm11794-201ENSMUST00000119446 237 ntBASIC0.39□□□□□ -2.35
Col27a1Q5QNQ9 Gm11834-201ENSMUST00000122257 585 ntBASIC0.39□□□□□ -2.35
Col27a1Q5QNQ9 Gm25827-201ENSMUST00000157089 107 ntBASIC0.39□□□□□ -2.35
Col27a1Q5QNQ9 Gm23640-201ENSMUST00000157860 104 ntBASIC0.39□□□□□ -2.35
Col27a1Q5QNQ9 Gm24499-201ENSMUST00000158446 104 ntBASIC0.39□□□□□ -2.35
Col27a1Q5QNQ9 Gm23182-201ENSMUST00000158688 135 ntBASIC0.39□□□□□ -2.35
Col27a1Q5QNQ9 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Col27a1Q5QNQ9 Gm24818-201ENSMUST00000175093 161 ntBASIC0.39□□□□□ -2.35
Col27a1Q5QNQ9 Gm22914-201ENSMUST00000175195 77 ntBASIC0.39□□□□□ -2.35
Col27a1Q5QNQ9 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.39□□□□□ -2.35
Col27a1Q5QNQ9 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.39□□□□□ -2.35
Col27a1Q5QNQ9 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.39□□□□□ -2.35
Col27a1Q5QNQ9 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.39□□□□□ -2.35
Col27a1Q5QNQ9 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.38□□□□□ -2.35
Col27a1Q5QNQ9 Gm23749-201ENSMUST00000104223 131 ntBASIC0.38□□□□□ -2.35
Col27a1Q5QNQ9 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
Col27a1Q5QNQ9 Gm23982-201ENSMUST00000157141 106 ntBASIC0.38□□□□□ -2.35
Col27a1Q5QNQ9 Gm38050-201ENSMUST00000191904 238 ntBASIC0.38□□□□□ -2.35
Col27a1Q5QNQ9 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Col27a1Q5QNQ9 Gm44396-201ENSMUST00000199843 114 ntBASIC0.38□□□□□ -2.35
Col27a1Q5QNQ9 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.38□□□□□ -2.35
Col27a1Q5QNQ9 Gm23625-201ENSMUST00000082457 100 ntBASIC0.38□□□□□ -2.35
Col27a1Q5QNQ9 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
Col27a1Q5QNQ9 Gm23584-201ENSMUST00000157655 129 ntBASIC0.38□□□□□ -2.35
Col27a1Q5QNQ9 Gm24345-201ENSMUST00000158706 124 ntBASIC0.38□□□□□ -2.35
Col27a1Q5QNQ9 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Col27a1Q5QNQ9 Gm43238-201ENSMUST00000196463 359 ntBASIC0.38□□□□□ -2.35
Col27a1Q5QNQ9 Gm44149-201ENSMUST00000204256 226 ntBASIC0.38□□□□□ -2.35
Col27a1Q5QNQ9 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.38□□□□□ -2.35
Col27a1Q5QNQ9 CT025603.4-201ENSMUST00000225777 413 ntBASIC0.38□□□□□ -2.35
Col27a1Q5QNQ9 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
Col27a1Q5QNQ9 Gm22387-201ENSMUST00000158191 131 ntBASIC0.37□□□□□ -2.35
Col27a1Q5QNQ9 Gm26194-201ENSMUST00000175036 71 ntBASIC0.37□□□□□ -2.35
Col27a1Q5QNQ9 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
Col27a1Q5QNQ9 Gm27997-201ENSMUST00000184942 69 ntBASIC0.37□□□□□ -2.35
Col27a1Q5QNQ9 Gm44325-201ENSMUST00000196757 77 ntBASIC0.37□□□□□ -2.35
Col27a1Q5QNQ9 Gm18213-201ENSMUST00000207850 178 ntBASIC0.37□□□□□ -2.35
Col27a1Q5QNQ9 Gm26495-201ENSMUST00000083152 137 ntBASIC0.37□□□□□ -2.35
Col27a1Q5QNQ9 Gm23969-201ENSMUST00000083324 74 ntBASIC0.37□□□□□ -2.35
Col27a1Q5QNQ9 Mir490-201ENSMUST00000093567 84 ntBASIC0.37□□□□□ -2.35
Col27a1Q5QNQ9 Mir362-201ENSMUST00000093592 65 ntBASIC0.37□□□□□ -2.35
Col27a1Q5QNQ9 Gm25783-201ENSMUST00000122525 190 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Mir3089-201ENSMUST00000175350 84 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Gm43432-201ENSMUST00000196352 121 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Gm44063-201ENSMUST00000203307 376 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Gm44828-201ENSMUST00000203745 106 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Gm22283-201ENSMUST00000082556 161 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Gm24037-201ENSMUST00000082871 180 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Gm24527-201ENSMUST00000082920 107 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Gm14671-201ENSMUST00000121790 262 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Gm26255-201ENSMUST00000122492 103 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Gm24903-201ENSMUST00000158131 126 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Gm25718-201ENSMUST00000158632 118 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Gm42988-201ENSMUST00000198116 225 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Gm43898-201ENSMUST00000204456 424 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Gm23406-201ENSMUST00000082537 122 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Mir155-201ENSMUST00000083463 65 ntBASIC0.36□□□□□ -2.35
Col27a1Q5QNQ9 Mir759-201ENSMUST00000103254 98 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 174.4 ms