Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm22978-201ENSMUST00000082607 160 ntBASIC2.96□□□□□ -1.94
Col18a1P39061 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Col18a1P39061 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Col18a1P39061 Gm45265-201ENSMUST00000210852 2497 ntBASIC2.96□□□□□ -1.94
Col18a1P39061 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Col18a1P39061 Gm24478-201ENSMUST00000157439 158 ntBASIC2.95□□□□□ -1.94
Col18a1P39061 Gm24237-201ENSMUST00000157790 132 ntBASIC2.95□□□□□ -1.94
Col18a1P39061 Gm24837-201ENSMUST00000158683 81 ntBASIC2.95□□□□□ -1.94
Col18a1P39061 Gm23702-201ENSMUST00000158840 130 ntBASIC2.95□□□□□ -1.94
Col18a1P39061 Gm22095-201ENSMUST00000158984 150 ntBASIC2.95□□□□□ -1.94
Col18a1P39061 Gm26864-201ENSMUST00000181346 156 ntBASIC2.95□□□□□ -1.94
Col18a1P39061 Gm27330-201ENSMUST00000184689 132 ntBASIC2.95□□□□□ -1.94
Col18a1P39061 Gm27952-201ENSMUST00000184748 105 ntBASIC2.95□□□□□ -1.94
Col18a1P39061 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.95□□□□□ -1.94
Col18a1P39061 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC2.95□□□□□ -1.94
Col18a1P39061 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Col18a1P39061 Gm22048-201ENSMUST00000104721 89 ntBASIC2.95□□□□□ -1.94
Col18a1P39061 Gm25828-201ENSMUST00000157087 95 ntBASIC2.95□□□□□ -1.94
Col18a1P39061 Gm22036-201ENSMUST00000157279 215 ntBASIC2.95□□□□□ -1.94
Col18a1P39061 Gm22159-201ENSMUST00000158412 130 ntBASIC2.95□□□□□ -1.94
Col18a1P39061 Gm25488-201ENSMUST00000158728 118 ntBASIC2.95□□□□□ -1.94
Col18a1P39061 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.95□□□□□ -1.94
Col18a1P39061 Gm28912-201ENSMUST00000189001 234 ntBASIC2.95□□□□□ -1.94
Col18a1P39061 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.95□□□□□ -1.94
Col18a1P39061 Gm24527-201ENSMUST00000082920 107 ntBASIC2.95□□□□□ -1.94
Col18a1P39061 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.95□□□□□ -1.94
Col18a1P39061 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.95□□□□□ -1.94
Col18a1P39061 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.94□□□□□ -1.94
Col18a1P39061 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Col18a1P39061 Gm25847-201ENSMUST00000116793 96 ntBASIC2.94□□□□□ -1.94
Col18a1P39061 Gm13687-201ENSMUST00000119857 282 ntBASIC2.94□□□□□ -1.94
Col18a1P39061 Gm22451-201ENSMUST00000122803 151 ntBASIC2.94□□□□□ -1.94
Col18a1P39061 Gm26345-201ENSMUST00000157534 120 ntBASIC2.94□□□□□ -1.94
Col18a1P39061 Mir5098-201ENSMUST00000175320 82 ntBASIC2.94□□□□□ -1.94
Col18a1P39061 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.94□□□□□ -1.94
Col18a1P39061 Gm25588-201ENSMUST00000082501 140 ntBASIC2.94□□□□□ -1.94
Col18a1P39061 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col18a1P39061 Gm15365-201ENSMUST00000122392 300 ntBASIC2.93□□□□□ -1.94
Col18a1P39061 Gm25449-201ENSMUST00000179389 79 ntBASIC2.93□□□□□ -1.94
Col18a1P39061 Mir6352-201ENSMUST00000184495 116 ntBASIC2.93□□□□□ -1.94
Col18a1P39061 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.93□□□□□ -1.94
Col18a1P39061 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.93□□□□□ -1.94
Col18a1P39061 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
Col18a1P39061 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col18a1P39061 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.93□□□□□ -1.94
Col18a1P39061 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col18a1P39061 Gm44240-201ENSMUST00000204015 2654 ntBASIC2.93□□□□□ -1.94
Col18a1P39061 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col18a1P39061 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col18a1P39061 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col18a1P39061 Mir1187-201ENSMUST00000116936 122 ntBASIC2.92□□□□□ -1.94
Col18a1P39061 Gm22093-201ENSMUST00000158980 111 ntBASIC2.92□□□□□ -1.94
Col18a1P39061 Gm44326-201ENSMUST00000198226 101 ntBASIC2.92□□□□□ -1.94
Col18a1P39061 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.92□□□□□ -1.94
Col18a1P39061 Gm22772-201ENSMUST00000104451 121 ntBASIC2.92□□□□□ -1.94
Col18a1P39061 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC2.92□□□□□ -1.94
Col18a1P39061 Gm23369-201ENSMUST00000175406 105 ntBASIC2.92□□□□□ -1.94
Col18a1P39061 Gm44564-201ENSMUST00000207985 180 ntBASIC2.92□□□□□ -1.94
Col18a1P39061 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.92□□□□□ -1.94
Col18a1P39061 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Col18a1P39061 Gm22672-201ENSMUST00000104414 134 ntBASIC2.91□□□□□ -1.94
Col18a1P39061 Gm14674-201ENSMUST00000117816 342 ntBASIC2.91□□□□□ -1.94
Col18a1P39061 Gm11333-201ENSMUST00000119479 148 ntBASIC2.91□□□□□ -1.94
Col18a1P39061 Gm24595-201ENSMUST00000122501 110 ntBASIC2.91□□□□□ -1.94
Col18a1P39061 Gm16328-201ENSMUST00000126985 196 ntBASIC2.91□□□□□ -1.94
Col18a1P39061 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC2.91□□□□□ -1.94
Col18a1P39061 Gm10212-201ENSMUST00000087884 324 ntBASIC2.91□□□□□ -1.94
Col18a1P39061 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Col18a1P39061 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Col18a1P39061 Gm37918-201ENSMUST00000192071 120 ntBASIC2.9□□□□□ -1.94
Col18a1P39061 Gm44903-201ENSMUST00000206840 130 ntBASIC2.9□□□□□ -1.94
Col18a1P39061 AC166341.8-201ENSMUST00000221267 108 ntBASIC2.9□□□□□ -1.94
Col18a1P39061 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.9□□□□□ -1.94
Col18a1P39061 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Col18a1P39061 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.9□□□□□ -1.95
Col18a1P39061 Gm10298-201ENSMUST00000074801 265 ntBASIC2.89□□□□□ -1.95
Col18a1P39061 Gm23507-201ENSMUST00000083078 107 ntBASIC2.89□□□□□ -1.95
Col18a1P39061 Gm26493-201ENSMUST00000083155 136 ntBASIC2.89□□□□□ -1.95
Col18a1P39061 Gm26327-201ENSMUST00000093724 111 ntBASIC2.89□□□□□ -1.95
Col18a1P39061 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
Col18a1P39061 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Col18a1P39061 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Col18a1P39061 Gm23194-201ENSMUST00000158813 105 ntBASIC2.89□□□□□ -1.95
Col18a1P39061 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.89□□□□□ -1.95
Col18a1P39061 Gm11351-202ENSMUST00000225724 478 ntBASIC2.89□□□□□ -1.95
Col18a1P39061 Gm22972-201ENSMUST00000083297 131 ntBASIC2.89□□□□□ -1.95
Col18a1P39061 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Col18a1P39061 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Col18a1P39061 Gm24890-201ENSMUST00000104389 102 ntBASIC2.88□□□□□ -1.95
Col18a1P39061 Gm13868-201ENSMUST00000122411 294 ntBASIC2.88□□□□□ -1.95
Col18a1P39061 Gm26425-201ENSMUST00000122529 82 ntBASIC2.88□□□□□ -1.95
Col18a1P39061 Gm23585-201ENSMUST00000157656 102 ntBASIC2.88□□□□□ -1.95
Col18a1P39061 Gm22605-201ENSMUST00000158289 108 ntBASIC2.88□□□□□ -1.95
Col18a1P39061 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.88□□□□□ -1.95
Col18a1P39061 mt-Tl2-201ENSMUST00000082417 71 ntBASIC2.88□□□□□ -1.95
Col18a1P39061 AF357341-201ENSMUST00000083088 75 ntBASIC2.88□□□□□ -1.95
Col18a1P39061 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Col18a1P39061 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Col18a1P39061 Gm23203-201ENSMUST00000104374 107 ntBASIC2.87□□□□□ -1.95
Col18a1P39061 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.87□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 185.4 ms