Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm22200-201ENSMUST00000158614 67 ntBASIC0.66□□□□□ -2.3
P20040 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC0.66□□□□□ -2.3
P20040 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
P20040 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.66□□□□□ -2.3
P20040 Gm23735-201ENSMUST00000082551 134 ntBASIC0.66□□□□□ -2.3
P20040 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
P20040 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.65□□□□□ -2.31
P20040 Gm22984-201ENSMUST00000122751 122 ntBASIC0.65□□□□□ -2.31
P20040 Gm24000-201ENSMUST00000158063 89 ntBASIC0.65□□□□□ -2.31
P20040 Gm25558-201ENSMUST00000158083 106 ntBASIC0.65□□□□□ -2.31
P20040 Gm26358-201ENSMUST00000158215 97 ntBASIC0.65□□□□□ -2.31
P20040 Mir1961-201ENSMUST00000158643 112 ntBASIC0.65□□□□□ -2.31
P20040 Gm23024-201ENSMUST00000158770 292 ntBASIC0.65□□□□□ -2.31
P20040 Gm22565-201ENSMUST00000175540 69 ntBASIC0.65□□□□□ -2.31
P20040 Gm25615-201ENSMUST00000177836 94 ntBASIC0.65□□□□□ -2.31
P20040 Gm27668-201ENSMUST00000184188 120 ntBASIC0.65□□□□□ -2.31
P20040 Gm20923-201ENSMUST00000190009 319 ntBASIC0.65□□□□□ -2.31
P20040 Gm21088-201ENSMUST00000190875 316 ntBASIC0.65□□□□□ -2.31
P20040 Gm44976-201ENSMUST00000205543 261 ntBASIC0.65□□□□□ -2.31
P20040 Gm45005-201ENSMUST00000206640 157 ntBASIC0.65□□□□□ -2.31
P20040 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.65□□□□□ -2.31
P20040 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.65□□□□□ -2.31
P20040 DQ267101-201ENSMUST00000082562 73 ntBASIC0.65□□□□□ -2.31
P20040 Gm22809-201ENSMUST00000082743 156 ntBASIC0.65□□□□□ -2.31
P20040 Gm24453-201ENSMUST00000083346 76 ntBASIC0.65□□□□□ -2.31
P20040 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.65□□□□□ -2.31
P20040 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
P20040 Gm22097-201ENSMUST00000157929 278 ntBASIC0.64□□□□□ -2.31
P20040 Gm25643-201ENSMUST00000158874 103 ntBASIC0.64□□□□□ -2.31
P20040 Mir15a-201ENSMUST00000175266 84 ntBASIC0.64□□□□□ -2.31
P20040 Gm22118-201ENSMUST00000175593 171 ntBASIC0.64□□□□□ -2.31
P20040 Gm20630-201ENSMUST00000177387 551 ntBASIC0.64□□□□□ -2.31
P20040 Mir6540-201ENSMUST00000184886 108 ntBASIC0.64□□□□□ -2.31
P20040 Gm28256-201ENSMUST00000188953 139 ntBASIC0.64□□□□□ -2.31
P20040 Gm28559-201ENSMUST00000190532 139 ntBASIC0.64□□□□□ -2.31
P20040 Gm43563-201ENSMUST00000196761 198 ntBASIC0.64□□□□□ -2.31
P20040 Gm42988-201ENSMUST00000198116 225 ntBASIC0.64□□□□□ -2.31
P20040 Gm44057-201ENSMUST00000204547 96 ntBASIC0.64□□□□□ -2.31
P20040 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.64□□□□□ -2.31
P20040 Mir448-201ENSMUST00000083516 112 ntBASIC0.64□□□□□ -2.31
P20040 Gm22003-201ENSMUST00000101885 107 ntBASIC0.63□□□□□ -2.31
P20040 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
P20040 Gm15213-201ENSMUST00000122098 216 ntBASIC0.63□□□□□ -2.31
P20040 Gm25544-201ENSMUST00000122676 120 ntBASIC0.63□□□□□ -2.31
P20040 Mir3109-201ENSMUST00000175301 88 ntBASIC0.63□□□□□ -2.31
P20040 Gm23410-201ENSMUST00000179967 107 ntBASIC0.63□□□□□ -2.31
P20040 Gm22756-201ENSMUST00000180118 107 ntBASIC0.63□□□□□ -2.31
P20040 Gm28669-201ENSMUST00000188400 100 ntBASIC0.63□□□□□ -2.31
P20040 Gm38113-201ENSMUST00000193704 201 ntBASIC0.63□□□□□ -2.31
P20040 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.63□□□□□ -2.31
P20040 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.63□□□□□ -2.31
P20040 Gm22505-201ENSMUST00000082956 108 ntBASIC0.63□□□□□ -2.31
P20040 Snora19-201ENSMUST00000082962 132 ntBASIC0.63□□□□□ -2.31
P20040 Gm22363-201ENSMUST00000083100 108 ntBASIC0.63□□□□□ -2.31
P20040 Gm23814-201ENSMUST00000083230 102 ntBASIC0.63□□□□□ -2.31
P20040 Gm23658-201ENSMUST00000083233 132 ntBASIC0.63□□□□□ -2.31
P20040 Gm23095-201ENSMUST00000083446 107 ntBASIC0.63□□□□□ -2.31
P20040 Mir362-201ENSMUST00000093592 65 ntBASIC0.63□□□□□ -2.31
P20040 Gm11420-201ENSMUST00000120047 402 ntBASIC0.62□□□□□ -2.31
P20040 Gm14919-201ENSMUST00000120839 390 ntBASIC0.62□□□□□ -2.31
P20040 Gm23584-201ENSMUST00000157655 129 ntBASIC0.62□□□□□ -2.31
P20040 Gm22283-201ENSMUST00000082556 161 ntBASIC0.62□□□□□ -2.31
P20040 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.62□□□□□ -2.31
P20040 Gm25875-201ENSMUST00000104323 107 ntBASIC0.61□□□□□ -2.31
P20040 Gm13801-201ENSMUST00000120750 160 ntBASIC0.61□□□□□ -2.31
P20040 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.61□□□□□ -2.31
P20040 Snora24-201ENSMUST00000174989 130 ntBASIC0.61□□□□□ -2.31
P20040 Gm43505-201ENSMUST00000200579 139 ntBASIC0.61□□□□□ -2.31
P20040 Gm42506-201ENSMUST00000202009 150 ntBASIC0.61□□□□□ -2.31
P20040 Gm44052-201ENSMUST00000203382 396 ntBASIC0.61□□□□□ -2.31
P20040 Gm44948-201ENSMUST00000209050 149 ntBASIC0.61□□□□□ -2.31
P20040 Gm25538-201ENSMUST00000101943 107 ntBASIC0.6□□□□□ -2.31
P20040 Gm23941-201ENSMUST00000101953 107 ntBASIC0.6□□□□□ -2.31
P20040 Gm25901-201ENSMUST00000158494 130 ntBASIC0.6□□□□□ -2.31
P20040 Gm24345-201ENSMUST00000158706 124 ntBASIC0.6□□□□□ -2.31
P20040 Gm24880-201ENSMUST00000158776 85 ntBASIC0.6□□□□□ -2.31
P20040 Gm20386-201ENSMUST00000174010 132 ntBASIC0.6□□□□□ -2.31
P20040 Gm22448-201ENSMUST00000179254 107 ntBASIC0.6□□□□□ -2.31
P20040 Mir6394-201ENSMUST00000184738 99 ntBASIC0.6□□□□□ -2.31
P20040 Gm28925-201ENSMUST00000188586 168 ntBASIC0.6□□□□□ -2.31
P20040 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.6□□□□□ -2.31
P20040 Mir7227-201ENSMUST00000200408 59 ntBASIC0.6□□□□□ -2.31
P20040 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.6□□□□□ -2.31
P20040 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
P20040 Gm24579-201ENSMUST00000103964 144 ntBASIC0.59□□□□□ -2.31
P20040 Gm23203-201ENSMUST00000104374 107 ntBASIC0.59□□□□□ -2.31
P20040 Gm24747-201ENSMUST00000157835 87 ntBASIC0.59□□□□□ -2.31
P20040 Mir3079-201ENSMUST00000175428 90 ntBASIC0.59□□□□□ -2.31
P20040 Gm26073-201ENSMUST00000179906 127 ntBASIC0.59□□□□□ -2.31
P20040 Mir6364-201ENSMUST00000183396 86 ntBASIC0.59□□□□□ -2.31
P20040 Gm38183-201ENSMUST00000193189 205 ntBASIC0.59□□□□□ -2.31
P20040 Gm42594-201ENSMUST00000199511 246 ntBASIC0.59□□□□□ -2.31
P20040 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.59□□□□□ -2.31
P20040 Gm26497-201ENSMUST00000083146 107 ntBASIC0.59□□□□□ -2.31
P20040 Snord33-201ENSMUST00000083694 84 ntBASIC0.59□□□□□ -2.31
P20040 Gm22553-201ENSMUST00000157797 295 ntBASIC0.58□□□□□ -2.32
P20040 Gm28008-201ENSMUST00000184021 186 ntBASIC0.58□□□□□ -2.32
P20040 Gm38060-201ENSMUST00000194822 464 ntBASIC0.58□□□□□ -2.32
P20040 Gm45616-201ENSMUST00000211711 319 ntBASIC0.58□□□□□ -2.32
P20040 Gm24920-201ENSMUST00000083018 85 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 151.2 ms