Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm25357-201ENSMUST00000082745 72 ntBASIC2.56□□□□□ -2
Hoxd3P09027 Gm25337-201ENSMUST00000083723 104 ntBASIC2.56□□□□□ -2
Hoxd3P09027 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Hoxd3P09027 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Hoxd3P09027 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.56□□□□□ -2
Hoxd3P09027 Gm37158-201ENSMUST00000191652 5704 ntBASIC2.56□□□□□ -2
Hoxd3P09027 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.55□□□□□ -2
Hoxd3P09027 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.55□□□□□ -2
Hoxd3P09027 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
Hoxd3P09027 Mir1187-201ENSMUST00000116936 122 ntBASIC2.55□□□□□ -2
Hoxd3P09027 Gm11253-201ENSMUST00000118486 201 ntBASIC2.55□□□□□ -2
Hoxd3P09027 Gm23181-201ENSMUST00000158685 110 ntBASIC2.55□□□□□ -2
Hoxd3P09027 Gm22503-201ENSMUST00000158983 115 ntBASIC2.55□□□□□ -2
Hoxd3P09027 Gm23860-201ENSMUST00000179446 132 ntBASIC2.55□□□□□ -2
Hoxd3P09027 Gm27878-201ENSMUST00000184000 106 ntBASIC2.55□□□□□ -2
Hoxd3P09027 Trbv25-201ENSMUST00000194700 273 ntBASIC2.55□□□□□ -2
Hoxd3P09027 Gm19855-201ENSMUST00000210145 249 ntBASIC2.55□□□□□ -2
Hoxd3P09027 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.55□□□□□ -2
Hoxd3P09027 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Hoxd3P09027 Gm23297-201ENSMUST00000083184 127 ntBASIC2.55□□□□□ -2
Hoxd3P09027 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Hoxd3P09027 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Hoxd3P09027 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC2.55□□□□□ -2
Hoxd3P09027 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Hoxd3P09027 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Hoxd3P09027 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.54□□□□□ -2
Hoxd3P09027 AC158598.2-201ENSMUST00000213397 3832 ntBASIC2.54□□□□□ -2
Hoxd3P09027 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Hoxd3P09027 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.54□□□□□ -2
Hoxd3P09027 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.54□□□□□ -2
Hoxd3P09027 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Hoxd3P09027 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.54□□□□□ -2
Hoxd3P09027 Gm23854-201ENSMUST00000158378 108 ntBASIC2.54□□□□□ -2
Hoxd3P09027 Gm22532-201ENSMUST00000158822 140 ntBASIC2.54□□□□□ -2
Hoxd3P09027 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.54□□□□□ -2
Hoxd3P09027 Gm43932-201ENSMUST00000204499 52 ntBASIC2.54□□□□□ -2
Hoxd3P09027 Gm44399-201ENSMUST00000205043 226 ntBASIC2.54□□□□□ -2
Hoxd3P09027 AF357341-201ENSMUST00000083088 75 ntBASIC2.54□□□□□ -2
Hoxd3P09027 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Hoxd3P09027 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Hoxd3P09027 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hoxd3P09027 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.53□□□□□ -2
Hoxd3P09027 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Hoxd3P09027 Gm25061-201ENSMUST00000104665 107 ntBASIC2.53□□□□□ -2
Hoxd3P09027 Gm22605-201ENSMUST00000158289 108 ntBASIC2.53□□□□□ -2
Hoxd3P09027 Gm37085-201ENSMUST00000193780 196 ntBASIC2.53□□□□□ -2
Hoxd3P09027 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Hoxd3P09027 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC2.53□□□□□ -2
Hoxd3P09027 Mir29c-201ENSMUST00000083614 88 ntBASIC2.53□□□□□ -2
Hoxd3P09027 Mir490-201ENSMUST00000093567 84 ntBASIC2.53□□□□□ -2
Hoxd3P09027 Gm44560-201ENSMUST00000207816 3115 ntBASIC2.53□□□□□ -2.01
Hoxd3P09027 Gm43268-201ENSMUST00000201536 4055 ntBASIC2.52□□□□□ -2.01
Hoxd3P09027 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Hoxd3P09027 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.52□□□□□ -2.01
Hoxd3P09027 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Hoxd3P09027 Gm22999-201ENSMUST00000157082 88 ntBASIC2.52□□□□□ -2.01
Hoxd3P09027 Gm24138-201ENSMUST00000157572 114 ntBASIC2.52□□□□□ -2.01
Hoxd3P09027 Gm22535-201ENSMUST00000158174 119 ntBASIC2.52□□□□□ -2.01
Hoxd3P09027 Mir6237-201ENSMUST00000183808 91 ntBASIC2.52□□□□□ -2.01
Hoxd3P09027 Gm20108-201ENSMUST00000219977 153 ntBASIC2.52□□□□□ -2.01
Hoxd3P09027 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.52□□□□□ -2.01
Hoxd3P09027 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Hoxd3P09027 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Hoxd3P09027 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.51□□□□□ -2.01
Hoxd3P09027 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Hoxd3P09027 Gm23011-201ENSMUST00000104148 132 ntBASIC2.51□□□□□ -2.01
Hoxd3P09027 Gm11414-201ENSMUST00000121795 263 ntBASIC2.51□□□□□ -2.01
Hoxd3P09027 Gm22722-201ENSMUST00000157467 132 ntBASIC2.51□□□□□ -2.01
Hoxd3P09027 Gm22833-201ENSMUST00000158292 132 ntBASIC2.51□□□□□ -2.01
Hoxd3P09027 Gm22768-201ENSMUST00000158366 153 ntBASIC2.51□□□□□ -2.01
Hoxd3P09027 Gm45522-201ENSMUST00000210784 166 ntBASIC2.51□□□□□ -2.01
Hoxd3P09027 Gm45471-201ENSMUST00000211270 281 ntBASIC2.51□□□□□ -2.01
Hoxd3P09027 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Hoxd3P09027 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Hoxd3P09027 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Hoxd3P09027 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Hoxd3P09027 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Hoxd3P09027 Gm22023-201ENSMUST00000104354 130 ntBASIC2.5□□□□□ -2.01
Hoxd3P09027 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.5□□□□□ -2.01
Hoxd3P09027 Gm25066-201ENSMUST00000158145 123 ntBASIC2.5□□□□□ -2.01
Hoxd3P09027 Gm20672-201ENSMUST00000176605 261 ntBASIC2.5□□□□□ -2.01
Hoxd3P09027 Gm3702-201ENSMUST00000211754 346 ntBASIC2.5□□□□□ -2.01
Hoxd3P09027 Gm23249-201ENSMUST00000083369 161 ntBASIC2.5□□□□□ -2.01
Hoxd3P09027 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Hoxd3P09027 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Hoxd3P09027 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Hoxd3P09027 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Hoxd3P09027 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Hoxd3P09027 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.49□□□□□ -2.01
Hoxd3P09027 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.49□□□□□ -2.01
Hoxd3P09027 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Hoxd3P09027 Gm26423-201ENSMUST00000104277 128 ntBASIC2.49□□□□□ -2.01
Hoxd3P09027 Gm12412-201ENSMUST00000121867 328 ntBASIC2.49□□□□□ -2.01
Hoxd3P09027 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Hoxd3P09027 Gm26004-201ENSMUST00000158804 116 ntBASIC2.49□□□□□ -2.01
Hoxd3P09027 Gm24656-201ENSMUST00000177548 132 ntBASIC2.49□□□□□ -2.01
Hoxd3P09027 Gm18486-201ENSMUST00000184040 298 ntBASIC2.49□□□□□ -2.01
Hoxd3P09027 Mir6914-201ENSMUST00000184999 69 ntBASIC2.49□□□□□ -2.01
Hoxd3P09027 Gm23136-201ENSMUST00000083425 99 ntBASIC2.49□□□□□ -2.01
Hoxd3P09027 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 184.9 ms