Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.61□□□□□ -2.51
Trav6-4A0A075B6B4 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC-0.61□□□□□ -2.51
Trav6-4A0A075B6B4 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC-0.61□□□□□ -2.51
Trav6-4A0A075B6B4 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.61□□□□□ -2.51
Trav6-4A0A075B6B4 Gm24042-201ENSMUST00000083114 103 ntBASIC-0.61□□□□□ -2.51
Trav6-4A0A075B6B4 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.61□□□□□ -2.51
Trav6-4A0A075B6B4 Gm24490-201ENSMUST00000083803 98 ntBASIC-0.61□□□□□ -2.51
Trav6-4A0A075B6B4 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-0.61□□□□□ -2.51
Trav6-4A0A075B6B4 Gm22814-201ENSMUST00000157452 104 ntBASIC-0.62□□□□□ -2.51
Trav6-4A0A075B6B4 Gm23182-201ENSMUST00000158688 135 ntBASIC-0.62□□□□□ -2.51
Trav6-4A0A075B6B4 Gm25444-201ENSMUST00000158999 113 ntBASIC-0.62□□□□□ -2.51
Trav6-4A0A075B6B4 Gm28011-201ENSMUST00000184097 175 ntBASIC-0.62□□□□□ -2.51
Trav6-4A0A075B6B4 Gm38213-201ENSMUST00000193203 173 ntBASIC-0.62□□□□□ -2.51
Trav6-4A0A075B6B4 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC-0.62□□□□□ -2.51
Trav6-4A0A075B6B4 Gm44989-201ENSMUST00000204749 217 ntBASIC-0.62□□□□□ -2.51
Trav6-4A0A075B6B4 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.62□□□□□ -2.51
Trav6-4A0A075B6B4 Snora20-201ENSMUST00000082703 128 ntBASIC-0.62□□□□□ -2.51
Trav6-4A0A075B6B4 Mir141-201ENSMUST00000083540 72 ntBASIC-0.62□□□□□ -2.51
Trav6-4A0A075B6B4 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.62□□□□□ -2.51
Trav6-4A0A075B6B4 Gm12255-201ENSMUST00000117184 284 ntBASIC-0.63□□□□□ -2.51
Trav6-4A0A075B6B4 Gm24577-201ENSMUST00000158580 63 ntBASIC-0.63□□□□□ -2.51
Trav6-4A0A075B6B4 Gm23819-201ENSMUST00000158744 109 ntBASIC-0.63□□□□□ -2.51
Trav6-4A0A075B6B4 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.63□□□□□ -2.51
Trav6-4A0A075B6B4 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.63□□□□□ -2.51
Trav6-4A0A075B6B4 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.63□□□□□ -2.51
Trav6-4A0A075B6B4 Mir327-201ENSMUST00000199328 69 ntBASIC-0.63□□□□□ -2.51
Trav6-4A0A075B6B4 AC120394.1-201ENSMUST00000217153 351 ntBASIC-0.63□□□□□ -2.51
Trav6-4A0A075B6B4 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC-0.63□□□□□ -2.51
Trav6-4A0A075B6B4 CT009550.5-201ENSMUST00000226286 382 ntBASIC-0.63□□□□□ -2.51
Trav6-4A0A075B6B4 AC117202.2-201ENSMUST00000226491 1101 ntBASIC-0.63□□□□□ -2.51
Trav6-4A0A075B6B4 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.63□□□□□ -2.51
Trav6-4A0A075B6B4 Gm23041-201ENSMUST00000083868 106 ntBASIC-0.63□□□□□ -2.51
Trav6-4A0A075B6B4 Gm14671-201ENSMUST00000121790 262 ntBASIC-0.64□□□□□ -2.51
Trav6-4A0A075B6B4 Gm22114-201ENSMUST00000177756 107 ntBASIC-0.64□□□□□ -2.51
Trav6-4A0A075B6B4 Gm28669-201ENSMUST00000188400 100 ntBASIC-0.64□□□□□ -2.51
Trav6-4A0A075B6B4 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.64□□□□□ -2.51
Trav6-4A0A075B6B4 Mir721-201ENSMUST00000200230 88 ntBASIC-0.64□□□□□ -2.51
Trav6-4A0A075B6B4 AC154994.1-201ENSMUST00000217395 302 ntBASIC-0.64□□□□□ -2.51
Trav6-4A0A075B6B4 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.64□□□□□ -2.51
Trav6-4A0A075B6B4 Gm22591-201ENSMUST00000104243 106 ntBASIC-0.65□□□□□ -2.51
Trav6-4A0A075B6B4 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.65□□□□□ -2.51
Trav6-4A0A075B6B4 Gm24509-201ENSMUST00000157086 101 ntBASIC-0.65□□□□□ -2.51
Trav6-4A0A075B6B4 Gm25358-201ENSMUST00000157189 101 ntBASIC-0.65□□□□□ -2.51
Trav6-4A0A075B6B4 Gm24853-201ENSMUST00000158026 121 ntBASIC-0.65□□□□□ -2.51
Trav6-4A0A075B6B4 Gm44352-201ENSMUST00000196358 110 ntBASIC-0.65□□□□□ -2.51
Trav6-4A0A075B6B4 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.65□□□□□ -2.51
Trav6-4A0A075B6B4 Gm42857-201ENSMUST00000200823 339 ntBASIC-0.65□□□□□ -2.51
Trav6-4A0A075B6B4 Gm44142-201ENSMUST00000203358 311 ntBASIC-0.65□□□□□ -2.51
Trav6-4A0A075B6B4 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.65□□□□□ -2.51
Trav6-4A0A075B6B4 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC-0.65□□□□□ -2.51
Trav6-4A0A075B6B4 CT009718.4-201ENSMUST00000221881 109 ntBASIC-0.65□□□□□ -2.51
Trav6-4A0A075B6B4 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.65□□□□□ -2.51
Trav6-4A0A075B6B4 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.65□□□□□ -2.51
Trav6-4A0A075B6B4 Snord38a-201ENSMUST00000083746 71 ntBASIC-0.65□□□□□ -2.51
Trav6-4A0A075B6B4 AC160115.1-201ENSMUST00000224678 1574 ntBASIC-0.66□□□□□ -2.51
Trav6-4A0A075B6B4 Mir767-201ENSMUST00000103256 107 ntBASIC-0.66□□□□□ -2.52
Trav6-4A0A075B6B4 Gm27926-201ENSMUST00000157180 66 ntBASIC-0.66□□□□□ -2.52
Trav6-4A0A075B6B4 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.66□□□□□ -2.52
Trav6-4A0A075B6B4 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.66□□□□□ -2.52
Trav6-4A0A075B6B4 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC-0.66□□□□□ -2.52
Trav6-4A0A075B6B4 Gm28418-201ENSMUST00000186179 423 ntBASIC-0.66□□□□□ -2.52
Trav6-4A0A075B6B4 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.66□□□□□ -2.52
Trav6-4A0A075B6B4 Gm43884-201ENSMUST00000204251 559 ntBASIC-0.66□□□□□ -2.52
Trav6-4A0A075B6B4 Gm9973-202ENSMUST00000220926 166 ntBASIC-0.66□□□□□ -2.52
Trav6-4A0A075B6B4 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.66□□□□□ -2.52
Trav6-4A0A075B6B4 Gm22685-201ENSMUST00000082848 106 ntBASIC-0.66□□□□□ -2.52
Trav6-4A0A075B6B4 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.67□□□□□ -2.52
Trav6-4A0A075B6B4 Gm14298-201ENSMUST00000139032 237 ntBASIC-0.67□□□□□ -2.52
Trav6-4A0A075B6B4 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC-0.67□□□□□ -2.52
Trav6-4A0A075B6B4 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.67□□□□□ -2.52
Trav6-4A0A075B6B4 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.67□□□□□ -2.52
Trav6-4A0A075B6B4 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.67□□□□□ -2.52
Trav6-4A0A075B6B4 Gm38261-201ENSMUST00000192608 316 ntBASIC-0.67□□□□□ -2.52
Trav6-4A0A075B6B4 Gm45119-201ENSMUST00000207612 199 ntBASIC-0.67□□□□□ -2.52
Trav6-4A0A075B6B4 Gm45543-201ENSMUST00000209327 88 ntBASIC-0.67□□□□□ -2.52
Trav6-4A0A075B6B4 AC164629.1-201ENSMUST00000220250 1113 ntBASIC-0.67□□□□□ -2.52
Trav6-4A0A075B6B4 Gm25204-201ENSMUST00000082843 106 ntBASIC-0.67□□□□□ -2.52
Trav6-4A0A075B6B4 Gm24440-201ENSMUST00000157236 63 ntBASIC-0.68□□□□□ -2.52
Trav6-4A0A075B6B4 Gm22885-201ENSMUST00000157410 107 ntBASIC-0.68□□□□□ -2.52
Trav6-4A0A075B6B4 Gm22733-201ENSMUST00000158094 91 ntBASIC-0.68□□□□□ -2.52
Trav6-4A0A075B6B4 Gm22447-201ENSMUST00000158155 92 ntBASIC-0.68□□□□□ -2.52
Trav6-4A0A075B6B4 Gm24512-201ENSMUST00000174963 65 ntBASIC-0.68□□□□□ -2.52
Trav6-4A0A075B6B4 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC-0.68□□□□□ -2.52
Trav6-4A0A075B6B4 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-0.68□□□□□ -2.52
Trav6-4A0A075B6B4 AC159619.2-201ENSMUST00000222924 401 ntBASIC-0.68□□□□□ -2.52
Trav6-4A0A075B6B4 Gm24707-201ENSMUST00000082812 107 ntBASIC-0.68□□□□□ -2.52
Trav6-4A0A075B6B4 Gm24043-201ENSMUST00000083108 116 ntBASIC-0.68□□□□□ -2.52
Trav6-4A0A075B6B4 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC-0.69□□□□□ -2.52
Trav6-4A0A075B6B4 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC-0.69□□□□□ -2.52
Trav6-4A0A075B6B4 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC-0.69□□□□□ -2.52
Trav6-4A0A075B6B4 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.69□□□□□ -2.52
Trav6-4A0A075B6B4 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.69□□□□□ -2.52
Trav6-4A0A075B6B4 Gm22631-201ENSMUST00000179656 94 ntBASIC-0.69□□□□□ -2.52
Trav6-4A0A075B6B4 Snord116l12-201ENSMUST00000179816 94 ntBASIC-0.69□□□□□ -2.52
Trav6-4A0A075B6B4 Gm28196-201ENSMUST00000187719 640 ntBASIC-0.69□□□□□ -2.52
Trav6-4A0A075B6B4 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC-0.69□□□□□ -2.52
Trav6-4A0A075B6B4 AL772265.1-201ENSMUST00000214379 305 ntBASIC-0.69□□□□□ -2.52
Trav6-4A0A075B6B4 AC156574.2-201ENSMUST00000228023 282 ntBASIC-0.69□□□□□ -2.52
Trav6-4A0A075B6B4 Gm25801-201ENSMUST00000082638 106 ntBASIC-0.69□□□□□ -2.52
Trav6-4A0A075B6B4 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 176.2 ms