Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.84□□□□□ -2.11
Trim54Q9ERP3 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.84□□□□□ -2.11
Trim54Q9ERP3 Gm25482-201ENSMUST00000083225 107 ntBASIC1.84□□□□□ -2.11
Trim54Q9ERP3 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Trim54Q9ERP3 Snord19-201ENSMUST00000104609 76 ntBASIC1.83□□□□□ -2.12
Trim54Q9ERP3 Gm24640-201ENSMUST00000116949 126 ntBASIC1.83□□□□□ -2.12
Trim54Q9ERP3 Gm22626-201ENSMUST00000116990 126 ntBASIC1.83□□□□□ -2.12
Trim54Q9ERP3 Gm16032-201ENSMUST00000118534 168 ntBASIC1.83□□□□□ -2.12
Trim54Q9ERP3 Gm14709-201ENSMUST00000121225 304 ntBASIC1.83□□□□□ -2.12
Trim54Q9ERP3 Gm22767-201ENSMUST00000158365 165 ntBASIC1.83□□□□□ -2.12
Trim54Q9ERP3 Gm24761-201ENSMUST00000179589 127 ntBASIC1.83□□□□□ -2.12
Trim54Q9ERP3 Gm24488-201ENSMUST00000179934 127 ntBASIC1.83□□□□□ -2.12
Trim54Q9ERP3 Gm25701-201ENSMUST00000179988 127 ntBASIC1.83□□□□□ -2.12
Trim54Q9ERP3 Gm26431-201ENSMUST00000180199 127 ntBASIC1.83□□□□□ -2.12
Trim54Q9ERP3 Gm27476-201ENSMUST00000183366 104 ntBASIC1.83□□□□□ -2.12
Trim54Q9ERP3 Gm38183-201ENSMUST00000193189 205 ntBASIC1.83□□□□□ -2.12
Trim54Q9ERP3 Gm44052-201ENSMUST00000203382 396 ntBASIC1.83□□□□□ -2.12
Trim54Q9ERP3 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.83□□□□□ -2.12
Trim54Q9ERP3 Gm22744-201ENSMUST00000083444 65 ntBASIC1.83□□□□□ -2.12
Trim54Q9ERP3 Mir221-201ENSMUST00000083488 95 ntBASIC1.83□□□□□ -2.12
Trim54Q9ERP3 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.83□□□□□ -2.12
Trim54Q9ERP3 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Trim54Q9ERP3 Gm26339-201ENSMUST00000102368 99 ntBASIC1.82□□□□□ -2.12
Trim54Q9ERP3 Snord89-201ENSMUST00000104516 110 ntBASIC1.82□□□□□ -2.12
Trim54Q9ERP3 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.82□□□□□ -2.12
Trim54Q9ERP3 Gm23901-201ENSMUST00000157570 107 ntBASIC1.82□□□□□ -2.12
Trim54Q9ERP3 Gm45508-201ENSMUST00000209298 299 ntBASIC1.82□□□□□ -2.12
Trim54Q9ERP3 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.82□□□□□ -2.12
Trim54Q9ERP3 Mir146-201ENSMUST00000083667 65 ntBASIC1.82□□□□□ -2.12
Trim54Q9ERP3 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trim54Q9ERP3 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trim54Q9ERP3 Gm14674-201ENSMUST00000117816 342 ntBASIC1.81□□□□□ -2.12
Trim54Q9ERP3 Gm14838-201ENSMUST00000118913 248 ntBASIC1.81□□□□□ -2.12
Trim54Q9ERP3 Gm6025-201ENSMUST00000121517 201 ntBASIC1.81□□□□□ -2.12
Trim54Q9ERP3 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.81□□□□□ -2.12
Trim54Q9ERP3 Gm23100-201ENSMUST00000083455 141 ntBASIC1.81□□□□□ -2.12
Trim54Q9ERP3 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.81□□□□□ -2.12
Trim54Q9ERP3 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trim54Q9ERP3 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.8□□□□□ -2.12
Trim54Q9ERP3 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.8□□□□□ -2.12
Trim54Q9ERP3 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.8□□□□□ -2.12
Trim54Q9ERP3 Gm12771-201ENSMUST00000120246 135 ntBASIC1.8□□□□□ -2.12
Trim54Q9ERP3 Gm25390-201ENSMUST00000157341 103 ntBASIC1.8□□□□□ -2.12
Trim54Q9ERP3 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.8□□□□□ -2.12
Trim54Q9ERP3 Mir8116-201ENSMUST00000184134 97 ntBASIC1.8□□□□□ -2.12
Trim54Q9ERP3 Mir410-201ENSMUST00000083563 81 ntBASIC1.8□□□□□ -2.12
Trim54Q9ERP3 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.79□□□□□ -2.12
Trim54Q9ERP3 Gm25538-201ENSMUST00000101943 107 ntBASIC1.79□□□□□ -2.12
Trim54Q9ERP3 Gm14536-201ENSMUST00000118324 138 ntBASIC1.79□□□□□ -2.12
Trim54Q9ERP3 Gm15027-201ENSMUST00000120922 138 ntBASIC1.79□□□□□ -2.12
Trim54Q9ERP3 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.79□□□□□ -2.12
Trim54Q9ERP3 Gm25831-201ENSMUST00000158924 163 ntBASIC1.79□□□□□ -2.12
Trim54Q9ERP3 Gm25035-201ENSMUST00000175414 77 ntBASIC1.79□□□□□ -2.12
Trim54Q9ERP3 Gm23714-201ENSMUST00000179259 105 ntBASIC1.79□□□□□ -2.12
Trim54Q9ERP3 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC1.79□□□□□ -2.12
Trim54Q9ERP3 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.79□□□□□ -2.12
Trim54Q9ERP3 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
Trim54Q9ERP3 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
Trim54Q9ERP3 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Trim54Q9ERP3 Mir223-201ENSMUST00000102112 110 ntBASIC1.78□□□□□ -2.12
Trim54Q9ERP3 Gm23584-201ENSMUST00000157655 129 ntBASIC1.78□□□□□ -2.12
Trim54Q9ERP3 Gm26181-201ENSMUST00000157687 106 ntBASIC1.78□□□□□ -2.12
Trim54Q9ERP3 Gm24902-201ENSMUST00000158126 123 ntBASIC1.78□□□□□ -2.12
Trim54Q9ERP3 Gm23208-201ENSMUST00000158666 127 ntBASIC1.78□□□□□ -2.12
Trim54Q9ERP3 Gm27694-201ENSMUST00000184740 86 ntBASIC1.78□□□□□ -2.12
Trim54Q9ERP3 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Trim54Q9ERP3 Snord82-201ENSMUST00000082889 70 ntBASIC1.78□□□□□ -2.12
Trim54Q9ERP3 Gm25627-201ENSMUST00000084003 153 ntBASIC1.78□□□□□ -2.12
Trim54Q9ERP3 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Trim54Q9ERP3 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.78□□□□□ -2.12
Trim54Q9ERP3 Gm25943-201ENSMUST00000103791 90 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 Mir466b-7-201ENSMUST00000103804 88 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 Mir466b-5-201ENSMUST00000103900 88 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 Mir3096-201ENSMUST00000116685 71 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 Gm14882-201ENSMUST00000117216 218 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 Gm25783-201ENSMUST00000122525 190 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 Gm23655-201ENSMUST00000122627 105 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 Gm26279-201ENSMUST00000157095 102 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 Gm23267-201ENSMUST00000178490 132 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 Mir466b-4-201ENSMUST00000178801 90 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 Gm25285-201ENSMUST00000178951 90 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 Mir466b-6-201ENSMUST00000180061 90 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 Mir466c-2-201ENSMUST00000180211 90 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 Gm27517-201ENSMUST00000184347 236 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 Gm28383-201ENSMUST00000187563 139 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 Gm29262-201ENSMUST00000190084 196 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 Mir34a-201ENSMUST00000083559 102 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 Mir320-201ENSMUST00000083594 82 ntBASIC1.77□□□□□ -2.13
Trim54Q9ERP3 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Trim54Q9ERP3 Gm12449-201ENSMUST00000117572 234 ntBASIC1.76□□□□□ -2.13
Trim54Q9ERP3 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.76□□□□□ -2.13
Trim54Q9ERP3 Gm22586-201ENSMUST00000157507 122 ntBASIC1.76□□□□□ -2.13
Trim54Q9ERP3 Gm23113-201ENSMUST00000158477 99 ntBASIC1.76□□□□□ -2.13
Trim54Q9ERP3 Gm25834-201ENSMUST00000158916 101 ntBASIC1.76□□□□□ -2.13
Trim54Q9ERP3 Gm23967-201ENSMUST00000175062 78 ntBASIC1.76□□□□□ -2.13
Trim54Q9ERP3 Gm24366-201ENSMUST00000175383 86 ntBASIC1.76□□□□□ -2.13
Trim54Q9ERP3 Gm29613-201ENSMUST00000185846 313 ntBASIC1.76□□□□□ -2.13
Trim54Q9ERP3 Gm29544-201ENSMUST00000188860 313 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 136.8 ms