Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Gm23656-201ENSMUST00000122626 112 ntBASIC1.51□□□□□ -2.17
Tdp1Q8BJ37 Gm23760-201ENSMUST00000158350 116 ntBASIC1.51□□□□□ -2.17
Tdp1Q8BJ37 Gm24668-201ENSMUST00000158935 104 ntBASIC1.51□□□□□ -2.17
Tdp1Q8BJ37 Gm24154-201ENSMUST00000175261 130 ntBASIC1.51□□□□□ -2.17
Tdp1Q8BJ37 Mir6240-201ENSMUST00000184281 117 ntBASIC1.51□□□□□ -2.17
Tdp1Q8BJ37 Mir7059-201ENSMUST00000184825 59 ntBASIC1.51□□□□□ -2.17
Tdp1Q8BJ37 Gm29014-201ENSMUST00000191422 326 ntBASIC1.51□□□□□ -2.17
Tdp1Q8BJ37 Gm45508-201ENSMUST00000209298 299 ntBASIC1.51□□□□□ -2.17
Tdp1Q8BJ37 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.51□□□□□ -2.17
Tdp1Q8BJ37 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.51□□□□□ -2.17
Tdp1Q8BJ37 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Tdp1Q8BJ37 Snora3-201ENSMUST00000083082 132 ntBASIC1.51□□□□□ -2.17
Tdp1Q8BJ37 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Tdp1Q8BJ37 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.5□□□□□ -2.17
Tdp1Q8BJ37 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
Tdp1Q8BJ37 Gm26339-201ENSMUST00000102368 99 ntBASIC1.5□□□□□ -2.17
Tdp1Q8BJ37 Gm6897-201ENSMUST00000117714 138 ntBASIC1.5□□□□□ -2.17
Tdp1Q8BJ37 Gm14758-201ENSMUST00000119104 138 ntBASIC1.5□□□□□ -2.17
Tdp1Q8BJ37 Gm11204-201ENSMUST00000122438 147 ntBASIC1.5□□□□□ -2.17
Tdp1Q8BJ37 Gm23172-201ENSMUST00000157160 124 ntBASIC1.5□□□□□ -2.17
Tdp1Q8BJ37 Gm22279-201ENSMUST00000157200 93 ntBASIC1.5□□□□□ -2.17
Tdp1Q8BJ37 Gm25884-201ENSMUST00000157782 62 ntBASIC1.5□□□□□ -2.17
Tdp1Q8BJ37 Gm25654-201ENSMUST00000158467 88 ntBASIC1.5□□□□□ -2.17
Tdp1Q8BJ37 Gm27585-201ENSMUST00000183717 199 ntBASIC1.5□□□□□ -2.17
Tdp1Q8BJ37 Mir6419-201ENSMUST00000184784 113 ntBASIC1.5□□□□□ -2.17
Tdp1Q8BJ37 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.5□□□□□ -2.17
Tdp1Q8BJ37 Mir7116-201ENSMUST00000195956 70 ntBASIC1.5□□□□□ -2.17
Tdp1Q8BJ37 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.5□□□□□ -2.17
Tdp1Q8BJ37 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.5□□□□□ -2.17
Tdp1Q8BJ37 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Tdp1Q8BJ37 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Tdp1Q8BJ37 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.49□□□□□ -2.17
Tdp1Q8BJ37 n-R5s87-201ENSMUST00000122752 116 ntBASIC1.49□□□□□ -2.17
Tdp1Q8BJ37 Mir1967-201ENSMUST00000157789 82 ntBASIC1.49□□□□□ -2.17
Tdp1Q8BJ37 Gm23221-201ENSMUST00000158118 93 ntBASIC1.49□□□□□ -2.17
Tdp1Q8BJ37 Gm24729-201ENSMUST00000158225 137 ntBASIC1.49□□□□□ -2.17
Tdp1Q8BJ37 Mir7063-201ENSMUST00000184158 91 ntBASIC1.49□□□□□ -2.17
Tdp1Q8BJ37 Mir7052-201ENSMUST00000184821 65 ntBASIC1.49□□□□□ -2.17
Tdp1Q8BJ37 Gm33866-201ENSMUST00000196911 289 ntBASIC1.49□□□□□ -2.17
Tdp1Q8BJ37 Mir146-201ENSMUST00000083667 65 ntBASIC1.49□□□□□ -2.17
Tdp1Q8BJ37 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.49□□□□□ -2.17
Tdp1Q8BJ37 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.48□□□□□ -2.17
Tdp1Q8BJ37 Gm24121-201ENSMUST00000102029 106 ntBASIC1.48□□□□□ -2.17
Tdp1Q8BJ37 Gm13797-201ENSMUST00000121792 120 ntBASIC1.48□□□□□ -2.17
Tdp1Q8BJ37 Gm13560-201ENSMUST00000121865 329 ntBASIC1.48□□□□□ -2.17
Tdp1Q8BJ37 Gm25390-201ENSMUST00000157341 103 ntBASIC1.48□□□□□ -2.17
Tdp1Q8BJ37 Gm23194-201ENSMUST00000158813 105 ntBASIC1.48□□□□□ -2.17
Tdp1Q8BJ37 Mir3057-201ENSMUST00000175040 91 ntBASIC1.48□□□□□ -2.17
Tdp1Q8BJ37 Gm45116-201ENSMUST00000207392 275 ntBASIC1.48□□□□□ -2.17
Tdp1Q8BJ37 Gm19855-201ENSMUST00000210145 249 ntBASIC1.48□□□□□ -2.17
Tdp1Q8BJ37 Gm45754-201ENSMUST00000212380 279 ntBASIC1.48□□□□□ -2.17
Tdp1Q8BJ37 Gm24624-201ENSMUST00000082617 164 ntBASIC1.48□□□□□ -2.17
Tdp1Q8BJ37 Gm22780-201ENSMUST00000104084 132 ntBASIC1.47□□□□□ -2.17
Tdp1Q8BJ37 Gm23329-201ENSMUST00000157415 108 ntBASIC1.47□□□□□ -2.17
Tdp1Q8BJ37 Gm23083-201ENSMUST00000157851 116 ntBASIC1.47□□□□□ -2.17
Tdp1Q8BJ37 Gm25015-201ENSMUST00000158400 128 ntBASIC1.47□□□□□ -2.17
Tdp1Q8BJ37 Gm23636-201ENSMUST00000175070 95 ntBASIC1.47□□□□□ -2.17
Tdp1Q8BJ37 Gm27694-201ENSMUST00000184740 86 ntBASIC1.47□□□□□ -2.17
Tdp1Q8BJ37 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC1.47□□□□□ -2.17
Tdp1Q8BJ37 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.47□□□□□ -2.17
Tdp1Q8BJ37 Gm24805-201ENSMUST00000082931 104 ntBASIC1.47□□□□□ -2.17
Tdp1Q8BJ37 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.46□□□□□ -2.18
Tdp1Q8BJ37 Gm22673-201ENSMUST00000104415 131 ntBASIC1.46□□□□□ -2.18
Tdp1Q8BJ37 Gm13801-201ENSMUST00000120750 160 ntBASIC1.46□□□□□ -2.18
Tdp1Q8BJ37 Gm25825-201ENSMUST00000157091 124 ntBASIC1.46□□□□□ -2.18
Tdp1Q8BJ37 Gm22553-201ENSMUST00000157797 295 ntBASIC1.46□□□□□ -2.18
Tdp1Q8BJ37 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.46□□□□□ -2.18
Tdp1Q8BJ37 Gm29308-201ENSMUST00000188863 315 ntBASIC1.46□□□□□ -2.18
Tdp1Q8BJ37 Gm44962-201ENSMUST00000206460 279 ntBASIC1.46□□□□□ -2.18
Tdp1Q8BJ37 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.46□□□□□ -2.18
Tdp1Q8BJ37 Gm25634-201ENSMUST00000082667 105 ntBASIC1.46□□□□□ -2.18
Tdp1Q8BJ37 Gm24038-201ENSMUST00000082872 159 ntBASIC1.46□□□□□ -2.18
Tdp1Q8BJ37 Mir221-201ENSMUST00000083488 95 ntBASIC1.46□□□□□ -2.18
Tdp1Q8BJ37 Gm24762-201ENSMUST00000083689 104 ntBASIC1.46□□□□□ -2.18
Tdp1Q8BJ37 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Tdp1Q8BJ37 Gm14674-201ENSMUST00000117816 342 ntBASIC1.45□□□□□ -2.18
Tdp1Q8BJ37 Gm14838-201ENSMUST00000118913 248 ntBASIC1.45□□□□□ -2.18
Tdp1Q8BJ37 Gm27476-201ENSMUST00000183366 104 ntBASIC1.45□□□□□ -2.18
Tdp1Q8BJ37 Mir7683-201ENSMUST00000183842 61 ntBASIC1.45□□□□□ -2.18
Tdp1Q8BJ37 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.45□□□□□ -2.18
Tdp1Q8BJ37 Gm25482-201ENSMUST00000083225 107 ntBASIC1.45□□□□□ -2.18
Tdp1Q8BJ37 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Tdp1Q8BJ37 Gm24374-201ENSMUST00000104394 106 ntBASIC1.44□□□□□ -2.18
Tdp1Q8BJ37 Snord19-201ENSMUST00000104609 76 ntBASIC1.44□□□□□ -2.18
Tdp1Q8BJ37 Gm14536-201ENSMUST00000118324 138 ntBASIC1.44□□□□□ -2.18
Tdp1Q8BJ37 Gm15027-201ENSMUST00000120922 138 ntBASIC1.44□□□□□ -2.18
Tdp1Q8BJ37 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.44□□□□□ -2.18
Tdp1Q8BJ37 Gm23665-201ENSMUST00000158054 62 ntBASIC1.44□□□□□ -2.18
Tdp1Q8BJ37 Gm26029-201ENSMUST00000158659 132 ntBASIC1.44□□□□□ -2.18
Tdp1Q8BJ37 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.44□□□□□ -2.18
Tdp1Q8BJ37 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.44□□□□□ -2.18
Tdp1Q8BJ37 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.44□□□□□ -2.18
Tdp1Q8BJ37 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.44□□□□□ -2.18
Tdp1Q8BJ37 Mir384-201ENSMUST00000083565 88 ntBASIC1.44□□□□□ -2.18
Tdp1Q8BJ37 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Tdp1Q8BJ37 Gm24867-201ENSMUST00000104161 107 ntBASIC1.43□□□□□ -2.18
Tdp1Q8BJ37 Gm25274-201ENSMUST00000104296 135 ntBASIC1.43□□□□□ -2.18
Tdp1Q8BJ37 Gm22149-201ENSMUST00000104442 136 ntBASIC1.43□□□□□ -2.18
Tdp1Q8BJ37 Gm26301-201ENSMUST00000104813 95 ntBASIC1.43□□□□□ -2.18
Tdp1Q8BJ37 Mir873a-201ENSMUST00000104863 77 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 208.6 ms