Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Mir6386-201ENSMUST00000183558 104 ntBASIC2.88□□□□□ -1.95
Trim56Q80VI1 Mir7039-201ENSMUST00000183852 85 ntBASIC2.88□□□□□ -1.95
Trim56Q80VI1 Gm9156-201ENSMUST00000189660 463 ntBASIC2.88□□□□□ -1.95
Trim56Q80VI1 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.88□□□□□ -1.95
Trim56Q80VI1 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.88□□□□□ -1.95
Trim56Q80VI1 Gm22731-201ENSMUST00000158086 94 ntBASIC2.87□□□□□ -1.95
Trim56Q80VI1 Gm28647-201ENSMUST00000188416 197 ntBASIC2.87□□□□□ -1.95
Trim56Q80VI1 Gm22576-201ENSMUST00000083733 104 ntBASIC2.87□□□□□ -1.95
Trim56Q80VI1 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.87□□□□□ -1.95
Trim56Q80VI1 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Trim56Q80VI1 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.86□□□□□ -1.95
Trim56Q80VI1 Gm14602-201ENSMUST00000118625 340 ntBASIC2.86□□□□□ -1.95
Trim56Q80VI1 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Trim56Q80VI1 Gm23644-201ENSMUST00000157856 77 ntBASIC2.86□□□□□ -1.95
Trim56Q80VI1 Gm25866-201ENSMUST00000158245 112 ntBASIC2.86□□□□□ -1.95
Trim56Q80VI1 Gm24358-201ENSMUST00000158424 288 ntBASIC2.86□□□□□ -1.95
Trim56Q80VI1 Gm23090-201ENSMUST00000177331 78 ntBASIC2.86□□□□□ -1.95
Trim56Q80VI1 Mir8103-201ENSMUST00000183945 107 ntBASIC2.86□□□□□ -1.95
Trim56Q80VI1 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Trim56Q80VI1 Mir3961-201ENSMUST00000198795 59 ntBASIC2.86□□□□□ -1.95
Trim56Q80VI1 Gm19118-201ENSMUST00000222554 98 ntBASIC2.86□□□□□ -1.95
Trim56Q80VI1 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trim56Q80VI1 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Trim56Q80VI1 Gm23889-201ENSMUST00000122689 104 ntBASIC2.85□□□□□ -1.95
Trim56Q80VI1 Gm26091-201ENSMUST00000122704 82 ntBASIC2.85□□□□□ -1.95
Trim56Q80VI1 Gm24559-201ENSMUST00000157519 121 ntBASIC2.85□□□□□ -1.95
Trim56Q80VI1 Gm26406-201ENSMUST00000158503 124 ntBASIC2.85□□□□□ -1.95
Trim56Q80VI1 Gm25646-201ENSMUST00000178527 79 ntBASIC2.85□□□□□ -1.95
Trim56Q80VI1 Gm43626-201ENSMUST00000198575 162 ntBASIC2.85□□□□□ -1.95
Trim56Q80VI1 Mir7215-201ENSMUST00000200383 51 ntBASIC2.85□□□□□ -1.95
Trim56Q80VI1 Gm44478-201ENSMUST00000204875 114 ntBASIC2.85□□□□□ -1.95
Trim56Q80VI1 Gm22306-201ENSMUST00000082692 107 ntBASIC2.85□□□□□ -1.95
Trim56Q80VI1 Snora2b-201ENSMUST00000084005 137 ntBASIC2.85□□□□□ -1.95
Trim56Q80VI1 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Trim56Q80VI1 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trim56Q80VI1 Mir542-201ENSMUST00000102186 85 ntBASIC2.84□□□□□ -1.95
Trim56Q80VI1 Snora36b-201ENSMUST00000104383 132 ntBASIC2.84□□□□□ -1.95
Trim56Q80VI1 Gm25529-201ENSMUST00000104850 92 ntBASIC2.84□□□□□ -1.95
Trim56Q80VI1 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC2.84□□□□□ -1.95
Trim56Q80VI1 Gm26473-201ENSMUST00000116763 127 ntBASIC2.84□□□□□ -1.95
Trim56Q80VI1 Gm25945-201ENSMUST00000122484 135 ntBASIC2.84□□□□□ -1.95
Trim56Q80VI1 Gm22213-201ENSMUST00000157564 119 ntBASIC2.84□□□□□ -1.95
Trim56Q80VI1 Gm25371-201ENSMUST00000158162 101 ntBASIC2.84□□□□□ -1.95
Trim56Q80VI1 Gm27878-201ENSMUST00000184000 106 ntBASIC2.84□□□□□ -1.95
Trim56Q80VI1 Gm27991-201ENSMUST00000184804 137 ntBASIC2.84□□□□□ -1.95
Trim56Q80VI1 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.84□□□□□ -1.95
Trim56Q80VI1 Gm25588-201ENSMUST00000082501 140 ntBASIC2.84□□□□□ -1.95
Trim56Q80VI1 Gm25409-201ENSMUST00000083764 131 ntBASIC2.84□□□□□ -1.95
Trim56Q80VI1 Mir466-201ENSMUST00000093591 73 ntBASIC2.84□□□□□ -1.95
Trim56Q80VI1 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.84□□□□□ -1.96
Trim56Q80VI1 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Trim56Q80VI1 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Trim56Q80VI1 Gm22279-201ENSMUST00000157200 93 ntBASIC2.83□□□□□ -1.96
Trim56Q80VI1 Gm22790-201ENSMUST00000157229 129 ntBASIC2.83□□□□□ -1.96
Trim56Q80VI1 Mir1931-201ENSMUST00000158589 119 ntBASIC2.83□□□□□ -1.96
Trim56Q80VI1 Gm27369-201ENSMUST00000185182 71 ntBASIC2.83□□□□□ -1.96
Trim56Q80VI1 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
Trim56Q80VI1 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm24894-201ENSMUST00000122744 118 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm24718-201ENSMUST00000157521 136 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm25098-201ENSMUST00000177580 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm23356-201ENSMUST00000177610 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm24027-201ENSMUST00000177611 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm22511-201ENSMUST00000177628 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm22630-201ENSMUST00000177781 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm23560-201ENSMUST00000177782 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm25462-201ENSMUST00000177833 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm26059-201ENSMUST00000177865 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm22255-201ENSMUST00000177933 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm25146-201ENSMUST00000177976 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm25523-201ENSMUST00000178044 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm24585-201ENSMUST00000178104 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm22627-201ENSMUST00000178127 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm22912-201ENSMUST00000178242 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm24866-201ENSMUST00000178338 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm22524-201ENSMUST00000178357 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm25710-201ENSMUST00000178367 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm23575-201ENSMUST00000178406 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm24872-201ENSMUST00000178434 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm22449-201ENSMUST00000178924 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm24702-201ENSMUST00000178965 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm24206-201ENSMUST00000179011 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm24528-201ENSMUST00000179164 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm22909-201ENSMUST00000179190 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm26334-201ENSMUST00000179403 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm25463-201ENSMUST00000179405 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm25742-201ENSMUST00000179530 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm25209-201ENSMUST00000179576 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm26392-201ENSMUST00000179661 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm25230-201ENSMUST00000179740 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm26434-201ENSMUST00000179778 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm25741-201ENSMUST00000179825 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm24759-201ENSMUST00000179827 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm24219-201ENSMUST00000179861 79 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm23190-201ENSMUST00000180307 64 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm44464-201ENSMUST00000198010 138 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm25199-201ENSMUST00000083095 104 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.82□□□□□ -1.96
Trim56Q80VI1 Gm23254-201ENSMUST00000097244 79 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 193.5 ms