Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm15027-201ENSMUST00000120922 138 ntBASIC2.29□□□□□ -2.04
Ddx55Q6ZPL9 Gm16510-201ENSMUST00000153501 249 ntBASIC2.29□□□□□ -2.04
Ddx55Q6ZPL9 Gm23718-201ENSMUST00000157350 307 ntBASIC2.29□□□□□ -2.04
Ddx55Q6ZPL9 Gm22727-201ENSMUST00000158090 116 ntBASIC2.29□□□□□ -2.04
Ddx55Q6ZPL9 Gm23342-201ENSMUST00000158958 115 ntBASIC2.29□□□□□ -2.04
Ddx55Q6ZPL9 Gm25464-201ENSMUST00000175481 107 ntBASIC2.29□□□□□ -2.04
Ddx55Q6ZPL9 Gm44326-201ENSMUST00000198226 101 ntBASIC2.29□□□□□ -2.04
Ddx55Q6ZPL9 Mir410-201ENSMUST00000083563 81 ntBASIC2.29□□□□□ -2.04
Ddx55Q6ZPL9 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Ddx55Q6ZPL9 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Ddx55Q6ZPL9 Gm22148-201ENSMUST00000104445 107 ntBASIC2.28□□□□□ -2.04
Ddx55Q6ZPL9 Gm24131-201ENSMUST00000158539 107 ntBASIC2.28□□□□□ -2.04
Ddx55Q6ZPL9 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.28□□□□□ -2.04
Ddx55Q6ZPL9 Gm37693-201ENSMUST00000194562 234 ntBASIC2.28□□□□□ -2.04
Ddx55Q6ZPL9 Gm22866-201ENSMUST00000083947 177 ntBASIC2.28□□□□□ -2.04
Ddx55Q6ZPL9 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Ddx55Q6ZPL9 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Ddx55Q6ZPL9 Gm22768-201ENSMUST00000158366 153 ntBASIC2.27□□□□□ -2.05
Ddx55Q6ZPL9 Gm17528-201ENSMUST00000171026 239 ntBASIC2.27□□□□□ -2.05
Ddx55Q6ZPL9 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.27□□□□□ -2.05
Ddx55Q6ZPL9 Gm25321-201ENSMUST00000122558 102 ntBASIC2.26□□□□□ -2.05
Ddx55Q6ZPL9 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.26□□□□□ -2.05
Ddx55Q6ZPL9 Gm44922-201ENSMUST00000206690 90 ntBASIC2.26□□□□□ -2.05
Ddx55Q6ZPL9 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.26□□□□□ -2.05
Ddx55Q6ZPL9 Gm24907-201ENSMUST00000116932 128 ntBASIC2.25□□□□□ -2.05
Ddx55Q6ZPL9 Gm13922-201ENSMUST00000119505 156 ntBASIC2.25□□□□□ -2.05
Ddx55Q6ZPL9 Gm24851-201ENSMUST00000158028 103 ntBASIC2.25□□□□□ -2.05
Ddx55Q6ZPL9 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.25□□□□□ -2.05
Ddx55Q6ZPL9 Gm26097-201ENSMUST00000179642 93 ntBASIC2.25□□□□□ -2.05
Ddx55Q6ZPL9 Gm44057-201ENSMUST00000204547 96 ntBASIC2.25□□□□□ -2.05
Ddx55Q6ZPL9 Mir300-201ENSMUST00000083485 79 ntBASIC2.25□□□□□ -2.05
Ddx55Q6ZPL9 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.25□□□□□ -2.05
Ddx55Q6ZPL9 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Ddx55Q6ZPL9 Gm21940-201ENSMUST00000204940 2278 ntBASIC2.24□□□□□ -2.05
Ddx55Q6ZPL9 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Ddx55Q6ZPL9 Gm14588-201ENSMUST00000119895 172 ntBASIC2.24□□□□□ -2.05
Ddx55Q6ZPL9 Gm22279-201ENSMUST00000157200 93 ntBASIC2.24□□□□□ -2.05
Ddx55Q6ZPL9 Gm22557-201ENSMUST00000157804 102 ntBASIC2.24□□□□□ -2.05
Ddx55Q6ZPL9 Gm24001-201ENSMUST00000158463 85 ntBASIC2.24□□□□□ -2.05
Ddx55Q6ZPL9 Gm26160-201ENSMUST00000158965 63 ntBASIC2.24□□□□□ -2.05
Ddx55Q6ZPL9 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.24□□□□□ -2.05
Ddx55Q6ZPL9 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Ddx55Q6ZPL9 AC192091.2-201ENSMUST00000217869 117 ntBASIC2.24□□□□□ -2.05
Ddx55Q6ZPL9 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC2.24□□□□□ -2.05
Ddx55Q6ZPL9 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.24□□□□□ -2.05
Ddx55Q6ZPL9 Gm24038-201ENSMUST00000082872 159 ntBASIC2.24□□□□□ -2.05
Ddx55Q6ZPL9 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Ddx55Q6ZPL9 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ddx55Q6ZPL9 Mir301b-201ENSMUST00000102333 97 ntBASIC2.23□□□□□ -2.05
Ddx55Q6ZPL9 Gm26154-201ENSMUST00000102339 96 ntBASIC2.23□□□□□ -2.05
Ddx55Q6ZPL9 Gm25832-201ENSMUST00000104140 130 ntBASIC2.23□□□□□ -2.05
Ddx55Q6ZPL9 Gm24375-201ENSMUST00000104397 132 ntBASIC2.23□□□□□ -2.05
Ddx55Q6ZPL9 Gm26864-201ENSMUST00000181346 156 ntBASIC2.23□□□□□ -2.05
Ddx55Q6ZPL9 Mir8116-201ENSMUST00000184134 97 ntBASIC2.23□□□□□ -2.05
Ddx55Q6ZPL9 AC154282.1-201ENSMUST00000223154 265 ntBASIC2.23□□□□□ -2.05
Ddx55Q6ZPL9 AC165138.1-201ENSMUST00000226984 270 ntBASIC2.23□□□□□ -2.05
Ddx55Q6ZPL9 Mir93-201ENSMUST00000083593 88 ntBASIC2.23□□□□□ -2.05
Ddx55Q6ZPL9 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ddx55Q6ZPL9 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.23□□□□□ -2.05
Ddx55Q6ZPL9 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.23□□□□□ -2.05
Ddx55Q6ZPL9 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Ddx55Q6ZPL9 Gm26018-201ENSMUST00000104406 128 ntBASIC2.22□□□□□ -2.05
Ddx55Q6ZPL9 Gm22083-201ENSMUST00000157586 102 ntBASIC2.22□□□□□ -2.05
Ddx55Q6ZPL9 Gm24634-201ENSMUST00000158672 107 ntBASIC2.22□□□□□ -2.05
Ddx55Q6ZPL9 Gm16546-201ENSMUST00000159442 355 ntBASIC2.22□□□□□ -2.05
Ddx55Q6ZPL9 Mir7678-201ENSMUST00000185076 71 ntBASIC2.22□□□□□ -2.05
Ddx55Q6ZPL9 Mir7217-201ENSMUST00000200304 62 ntBASIC2.22□□□□□ -2.05
Ddx55Q6ZPL9 AC134601.1-201ENSMUST00000221058 109 ntBASIC2.22□□□□□ -2.05
Ddx55Q6ZPL9 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.22□□□□□ -2.05
Ddx55Q6ZPL9 AC101945.1-201ENSMUST00000226734 466 ntBASIC2.22□□□□□ -2.05
Ddx55Q6ZPL9 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Ddx55Q6ZPL9 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.21□□□□□ -2.06
Ddx55Q6ZPL9 Gm26412-201ENSMUST00000157666 55 ntBASIC2.21□□□□□ -2.06
Ddx55Q6ZPL9 Gm25884-201ENSMUST00000157782 62 ntBASIC2.21□□□□□ -2.06
Ddx55Q6ZPL9 Gm23113-201ENSMUST00000158477 99 ntBASIC2.21□□□□□ -2.06
Ddx55Q6ZPL9 Gm25716-201ENSMUST00000158628 104 ntBASIC2.21□□□□□ -2.06
Ddx55Q6ZPL9 Gm20477-201ENSMUST00000174028 280 ntBASIC2.21□□□□□ -2.06
Ddx55Q6ZPL9 Mir6388-201ENSMUST00000184417 75 ntBASIC2.21□□□□□ -2.06
Ddx55Q6ZPL9 Gm23370-201ENSMUST00000199545 130 ntBASIC2.21□□□□□ -2.06
Ddx55Q6ZPL9 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.21□□□□□ -2.06
Ddx55Q6ZPL9 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.21□□□□□ -2.06
Ddx55Q6ZPL9 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.21□□□□□ -2.06
Ddx55Q6ZPL9 Gm24668-201ENSMUST00000158935 104 ntBASIC2.2□□□□□ -2.06
Ddx55Q6ZPL9 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Ddx55Q6ZPL9 Gm29308-201ENSMUST00000188863 315 ntBASIC2.2□□□□□ -2.06
Ddx55Q6ZPL9 Gm19855-201ENSMUST00000210145 249 ntBASIC2.2□□□□□ -2.06
Ddx55Q6ZPL9 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Ddx55Q6ZPL9 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Ddx55Q6ZPL9 Mir3086-201ENSMUST00000175072 87 ntBASIC2.19□□□□□ -2.06
Ddx55Q6ZPL9 Snord43-201ENSMUST00000199549 108 ntBASIC2.19□□□□□ -2.06
Ddx55Q6ZPL9 Gm25357-201ENSMUST00000082745 72 ntBASIC2.19□□□□□ -2.06
Ddx55Q6ZPL9 Mir186-201ENSMUST00000083497 71 ntBASIC2.19□□□□□ -2.06
Ddx55Q6ZPL9 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.19□□□□□ -2.06
Ddx55Q6ZPL9 Snora69-201ENSMUST00000083708 131 ntBASIC2.19□□□□□ -2.06
Ddx55Q6ZPL9 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.19□□□□□ -2.06
Ddx55Q6ZPL9 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Ddx55Q6ZPL9 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Ddx55Q6ZPL9 Gm26403-201ENSMUST00000158500 105 ntBASIC2.18□□□□□ -2.06
Ddx55Q6ZPL9 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC2.18□□□□□ -2.06
Ddx55Q6ZPL9 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 164.6 ms